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Construction of chromosome segment substitution lines in peanut (Arachis hypogaea L.) using a wild synthetic and QTL mapping for plant morphology

Foncéka Daniel, Tossim Hodo-Abalo, Rivallan Ronan, Vignes Hélène, Lacut Elodie, De Bellis Fabien, Faye Issa, Ndoye Ousmane, Leal-Bertioli Soraya C.M., Valls José F.M., Bertioli David J., Glaszmann Jean-Christophe, Courtois Brigitte, Rami Jean-François. 2012. Construction of chromosome segment substitution lines in peanut (Arachis hypogaea L.) using a wild synthetic and QTL mapping for plant morphology. PloS One, 7 (11):e48642, 11 p.

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Quartile : Q1, Sujet : MULTIDISCIPLINARY SCIENCES

Liste HCERES des revues (en SHS) : oui

Thème(s) HCERES des revues (en SHS) : Psychologie-éthologie-ergonomie; Staps

Abstract : Chromosome segment substitution lines (CSSLs) are powerful QTL mapping populations that have been used to elucidate the molecular basis of interesting traits of wild species. Cultivated peanut is an allotetraploid with limited genetic diversity. Capturing the genetic diversity from peanut wild relatives is an important objective in many peanut breeding programs. In this study, we used a marker-assisted backcrossing strategy to produce a population of 122 CSSLs from the cross between the wild synthetic allotetraploid (A. ipae¨nsis6A. duranensis)4x and the cultivated Fleur11 variety. The 122 CSSLs offered a broad coverage of the peanut genome, with target wild chromosome segments averaging 39.2 cM in length. As a demonstration of the utility of these lines, four traits were evaluated in a subset of 80 CSSLs. A total of 28 lines showed significant differences from Fleur11. The line6trait significant associations were assigned to 42 QTLs: 14 for plant growth habit, 15 for height of the main stem, 12 for plant spread and one for flower color. Among the 42 QTLs, 37 were assigned to genomic regions and three QTL positions were considered putative. One important finding arising from this QTL analysis is that peanut growth habit is a complex trait that is governed by several QTLs with different effects. The CSSL population developed in this study has proved efficient for deciphering the molecular basis of trait variations and will be useful to the peanut scientific community for future QTL mapping studies. (Résumé d'auteur)

Mots-clés Agrovoc : Arachis hypogaea, Variation génétique, Plante sauvage, Caractère agronomique, Rétrocroisement, Carte génétique, Chromosome, Locus des caractères quantitatifs, Génétique des populations

Mots-clés géographiques Agrovoc : Sénégal

Mots-clés complémentaires : QTL

Classification Agris : F30 - Plant genetics and breeding
F62 - Plant physiology - Growth and development
F50 - Plant structure

Champ stratégique Cirad : Axe 1 (2005-2013) - Intensification écologique

Auteurs et affiliations

  • Foncéka Daniel, CIRAD-BIOS-UMR AGAP (FRA)
  • Tossim Hodo-Abalo, CERAAS (SEN)
  • Rivallan Ronan, CIRAD-BIOS-UMR AGAP (FRA)
  • Vignes Hélène, CIRAD-BIOS-UMR AGAP (FRA)
  • Lacut Elodie
  • De Bellis Fabien, CIRAD-BIOS-UMR AGAP (FRA) ORCID: 0000-0001-7070-7691
  • Faye Issa, ISRA (SEN)
  • Ndoye Ousmane, ISRA (SEN)
  • Leal-Bertioli Soraya C.M., EMBRAPA (BRA)
  • Valls José F.M., EMBRAPA (BRA)
  • Bertioli David J., UCB (BRA)
  • Glaszmann Jean-Christophe, CIRAD-BIOS-UMR AGAP (FRA) ORCID: 0000-0001-9918-875X
  • Courtois Brigitte, CIRAD-BIOS-UMR AGAP (FRA) ORCID: 0000-0003-2118-7102
  • Rami Jean-François, CIRAD-BIOS-UMR AGAP (FRA) ORCID: 0000-0002-5679-3877

Source : Cirad - Agritrop (https://agritrop.cirad.fr/566333/)

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