TropGeneDB, the multi-tropical crop information system updated and extended

Hamelin Chantal, Sempere Guilhem, Jouffe Vincent, Ruiz Manuel. 2013. TropGeneDB, the multi-tropical crop information system updated and extended. Nucleic Acids Research, 41 (D1), D1172-D1175

Journal article ; Article de revue à facteur d'impact Revue en libre accès total
Published version - Anglais
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Abstract : TropGeneDB ( was created to store genetic, molecular and phenotypic data on tropical crop species. The most common data stored in TropGeneDB are molecular markers, quantitative trait loci, genetic and physical maps, genetic diversity, phenotypic diversity studies and information on genetic resources (geographic origin, parentage, collection). TropGeneDB is organized on a crop basis with currently nine public modules (banana, cocoa, coconut, coffee, cotton, oil palm, rice, rubber tree, sugarcane). Crop-specific Web consultation interfaces have been designed to allow quick consultations and personalized complex queries. TropGeneDB is a component of the South Green Bioinformatics Platform ( (Résumé d'auteur)

Mots-clés Agrovoc : Système d'information, Banque de données, Plante de culture tropicale, Génétique, Phénotype, Carte génétique, Variation génétique, Ressource génétique végétale, Bioinformatique, Biologie moléculaire, Marqueur génétique, Musa, Gossypium, Oryza, Hevea brasiliensis, Saccharum, Elaeis guineensis, Theobroma cacao, Cocos nucifera, Coffea

Classification Agris : C30 - Documentation and information
F30 - Plant genetics and breeding

Champ stratégique Cirad : Axe 1 (2005-2013) - Intensification écologique

Auteurs et affiliations

  • Hamelin Chantal, CIRAD-BIOS-UMR AGAP (FRA)
  • Sempere Guilhem, CIRAD-BIOS-UMR AGAP (FRA)
  • Jouffe Vincent
  • Ruiz Manuel, CIRAD-BIOS-UMR AGAP (FRA) ORCID: 0000-0001-8153-276X

Source : Cirad - Agritrop (

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