Applied Coffee Genomics: Towards a GWS Program : S01T02

Carneiro Fernanda A, Rego Erica C.S., Costa T.C.S., Lima E.A., Oliveira S.A., Duarte Karoline Estefani, Rocha Omar C., Rodrigues Gustavo Costa, Caravalho M.A.F., Bartholo Gabriel Ferreira, Guerra Antonio Fernando, Marraccini Pierre, Grattapaglia Dario, Andrade Alan Carvalho. 2013. Applied Coffee Genomics: Towards a GWS Program : S01T02. In : Biotic and Abiotic Stress Tolerance in Plants: the Challenge for the 21st Century : Book of abstracts of the CIBA 2013. Brasileiro Ana Christina Miranda (ed.), Fortes Ferreira Claudia (ed.), Fernandez Diana (ed.), Micheli Fabienne (ed.), Coelho Filho M.A. (ed.), Marraccini Pierre (ed.). EMBRAPA, UESC, CIRAD, IRD. Brasilia : EMBRAPA, Résumé, p. 12. Workshop on Biotic and Abiotic Stress Tolerance in Plants: the Challenge for the 21st Century, Ilhéus-Bahia, Brésil, 6 November 2013/8 November 2013.

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Abstract : In recent years, significant advances have occurred in the development of genomic tools to help accelerating the genetic improvement of coffee, a perennial crop with high economic importance. The recent conclusion of the complete genome sequencing of Coffea canephora will serve as a reference sequence for use in advanced molecular genetics, applied directly to molecular breeding of this species, such as the establishment of genome-wide selection programs (GWS). In that direction, a population of 1300 C. canephora individuals maintained at the experimental field of Embrapa Cerrados is being currently phenotyped for different traits such as production, vigour, bean morphology and biochemical composition, as well as drought tolerance. A sample of 30 pools of genotypes, comprising the parentals of the population under study as well as representatives of the C. canephora diversity groups have been re-sequenced by Ilumina Hi-seq for SNPs mining. A genotyping platform for coffee is being established and will provide the required tools for association studies. Results of this ongoing study will be presented and discussed. Work supported by CAPES-COFECUB, Consórcio Pesquisa Café, INCT-CAFÉ (CNPq/FAPEMIG). (Texte intégral)

Classification Agris : F30 - Plant genetics and breeding

Auteurs et affiliations

  • Carneiro Fernanda A, EMBRAPA (BRA)
  • Rego Erica C.S.
  • Costa T.C.S.
  • Lima E.A.
  • Oliveira S.A., UFPB (BRA)
  • Duarte Karoline Estefani
  • Rocha Omar C.
  • Rodrigues Gustavo Costa, EMBRAPA (BRA)
  • Caravalho M.A.F.
  • Bartholo Gabriel Ferreira
  • Guerra Antonio Fernando
  • Marraccini Pierre, CIRAD-BIOS-UMR AGAP (BRA) ORCID: 0000-0001-7637-6811
  • Grattapaglia Dario
  • Andrade Alan Carvalho, EMBRAPA (BRA)

Autres liens de la publication

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