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Number of items: 560.

2020

Beyond seek and destroy: How to generate allelic series using genome editing tools. Herbert Leo, Meunier Anne Cecile, Bes Martine, Vernet Aurore, Portefaix Murielle, Durandet Franz, Michel Rémy, Chaine Christian, This Patrice, Guiderdoni Emmanuel, Périn Christophe. 2020. Rice, 13:5, 9 p.
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Complete genome sequence reveals evolutionary and comparative genomic features of Xanthomonas albilineans causing sugarcane leaf scald. Zhang Hui-Li, Ntambo Mbuya Sylvain, Rott Philippe, Chen Gongyou, Chen Li-Lan, Huang Mei-Ting, Gao San-Ji. 2020. Microorganisms, 8 (2):182, 16 p.
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Convergent evolution leading to the appearance of furanocoumarins in citrus plants. Limones-Mendez Mariana, Dugrand-Judek Audray, Villard Cloé, Coqueret Victoire, Froelicher Yann, Bourgaud Frédéric, Olry Alexandre, Hehn Alain. 2020. Plant Science, 292:110392, 9 p.
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Diverse genomoviruses representing twenty-nine species identified associated with plants. Fontenele Rafaela S, Roumagnac Philippe, Richet Cécile, Kraberger Simona, Stainton Daisy, Aleamotu‘a Maketalena, Filloux Denis, Bernardo Pauline, Harkins Gordon William, McCarthy James, Charles Lachlan S., Lamas Natalia S., Abreu Emanuel F. M., Abreu Rayane A., Batista Graciete B., Lacerda Ana L. M., Salywon Andrew M., Wojciechowski Martin, Majure Lucas C., Martin Darren Patrick, Ribeiro Simone G., Lefeuvre Pierre, Varsani Arvind. 2020. Archives of Virology, 165 (12) : pp. 2891-2901.
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Evaluation of un-methylated DNA enrichment in sequencing of African swine fever virus complete genome. Pereira De Oliveira Rémi, Lucas Pierrick, Chastagner Amélie, De Boisseson Claire, Vial Laurence, Le Potier Marie-Frédérique, Blanchard Yannick. 2020. Journal of Virological Methods, 285:113959, 7 p.
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Genome ancestry mosaics reveal multiple and cryptic contributors to cultivated banana. Martin Guillaume, Cardi Céline, Sarah Gautier, Ricci Sebastien, Jenny Christophe, Fondi Emmanuel, Perrier Xavier, Glaszmann Jean-Christophe, D'Hont Angélique, Yahiaoui Nabila. 2020. Plant Journal, 102 (5) : pp. 1008-1025.
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Genome-wide genotyping elucidates the geographical diversification and dispersal of the polyploid and clonally propagated yam (Dioscorea alata L.). Sharif Bilal Muhammad, Burgarella Concetta, Cormier Fabien, Mournet Pierre, Causse Sandrine, Nguyen Van Kien, Kaoh Juliane, Rajaonah Mamy Tiana, Lakshan Senanayake Ravinda, Waki Jeffrey, Bhattacharjee Ranjana, Badara Gueye, Pachakkil Babil, Arnau Gemma, Chaïr Hâna. 2020. Annals of Botany:mcaa122, 10 p.
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Sorghum mastrevirus-associated alphasatellites: New geminialphasatellites associated with an African streak mastrevirus infecting wild Poaceae plants on Reunion Island. Claverie Sohini, Varsani Arvind, Hoareau Murielle, Filloux Denis, Roumagnac Philippe, Martin Darren Patrick, Lefeuvre Pierre, Lett Jean-Michel. 2020. Archives of Virology, 165 (8) : pp. 1925-1928.
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Sugarcane genome architecture decrypted with chromosome-specific oligo probes. Piperidis Nathalie, D'Hont Angélique. 2020. Plant Journal, 103 (6) : pp. 2039-2051.
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Thirty years of genome engineering in rice: from gene addition to gene editing. Meynard Donaldo, Vernet Aurore, Meunier Anne Cecile, Mieulet Delphine, Bes Martine, Portefaix Murielle, Breitler Jean-Christophe, Périn Christophe, Guiderdoni Emmanuel. 2020. In : Annual plant reviews online. Roberts Jeremy (ed.). Chichester : John Wiley & Sons, pp. 1-76. (Annual plant reviews, 3) ISBN 9781119312994
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Whole genome sequencing and phylogenetic characterization of a novel bat-associated picornavirus-like virus with an unusual genome organization. Temmam Sarah, Hul Vibol, Bigot Thomas, Bessaud Maël, Chrétien Delphine, Hoem Thavry, Gorman Christopher, Duong Veasna, Dussart Philippe, Cappelle Julien, Eloit Marc. 2020. Infection, Genetics and Evolution, 78:104130, 5 p.
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The repetitive content in lupin genomes. Ainouche Abdelkader, Paris Aurore, Giraud Delphine, Keller Jean, Raimondeau Pauline, Mahe Frédéric, Neuman Pavel, Novak Petr, Macas Jiri, Ainouche Malika Lily, Salmon Armel, Martin Guillaume. 2020. In : The lupin genome. Singh Karam B. (ed.), Kamphuis Lars G. (ed.), Nelson Matthew N. (ed.). Cham : Springer, pp. 161-186. (Compendium of Plant Genomes) ISBN 978-3-030-21269-8
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2019

Fine scale genomic signals of admixture and alien introgression among Asian rice landraces. Santos Joao, Chebotarov Dmytro, McNally Kenneth L., Bartholome Jérôme, Droc Gaëtan, Billot Claire, Glaszmann Jean-Christophe. 2019. Genome Biology and Evolution, 11 (5) : pp. 1358-1373.
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Genomic signatures of adaptation to Sahelian and Soudanian climates in sorghum landraces of Senegal. Faye Jacques, Maina Fanna, Hu Zhenbin, Foncéka Daniel, Cissé Ndiaga, Morris Geoffrey P.. 2019. Ecology and Evolution, 9 (10) : pp. 6038-6051.
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High‑throughput sequencing of complete genomes of ipomoviruses associated with an epidemic of cassava brown streak disease in the Comoros Archipelago. Scussel Sarah, Candresse Thierry, Marais Armelle, Claverie Sohini, Hoareau Murielle, Azali Hamza Abdou, Verdin Eric, Tepfer Mark, Filloux Denis, Fernandez Emmanuel, Roumagnac Philippe, Robene Isabelle, Lefeuvre Pierre, Jourda Cyril, Roux-Cuvelier Michel, Lett Jean-Michel. 2019. Archives of Virology, 164 (8) : pp. 2193-2196.
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Mapping and exploiting the citrus genome. Ollitrault Patrick. 2019. In : Achieving sustainable cultivation of tropical fruits. Yahia Elhadi M. (ed.). Cambridge : Burleigh Dodds Science Publishing, pp. 3-42. (Burleigh Dodds Series in Agricultural Science) ISBN 978-1-78676-284-9
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Musa balbisiana genome reveals subgenome evolution and functional divergence. Wang Zhuo, Miao Hongxia, Liu Juhua, Xu Biyu, Yao Xiaoming, Xu Chunyan, Zhao Shancen, Fang Xiaodong, Jia Caihong, Wang Jingyi, Zhang Jianbin, Li Jing, Xu Yi, Wang Jiashui, Ma Weihong, Wu Zhixiang, Yu Lili, Yang Yulan, Liu Chun, Guo Yu, Sun Silong, Baurens Franc-Christophe, Martin Guillaume, Salmon Frédéric, Garsmeur Olivier, Yahiaoui Nabila, Hervouet Catherine, Rouard Mathieu, Laboureau Nathalie, Habas Rémy, Ricci Sebastien, Peng Ming, Guo Anping, Xie Jianghui, Li Yin, Ding Zehong, Yan Yan, Tie Weiwei, D'Hont Angélique, Hu Wei, Jin Zhiqiang. 2019. Nature Plants, 5 : pp. 810-821.
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Next-generation sequencing accelerates crop gene discovery. le Nguyen Khanh, Grondin Alexandre, Courtois Brigitte, Gantet Pascal. 2019. Trends in Plant Science, 24 (3) : pp. 263-274.
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Recombination and large structural variations shape interspecific edible bananas genomes. Baurens Franc-Christophe, Martin Guillaume, Hervouet Catherine, Salmon Frédéric, Yohomé David, Ricci Sebastien, Rouard Mathieu, Habas Rémy, Lemainque Arnaud, Yahiaoui Nabila, D'Hont Angélique. 2019. Molecular Biology and Evolution, 36 (1) : pp. 97-111.
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Rice Galaxy: An open resource for plant science. Juanillas Venice, Dereeper Alexis, Beaume Nicolas, Droc Gaëtan, Dizon Joshua, Mendoza John Robert, Perdon Jon Peter, Mansueto Locedie, Triplett Lindsay, Lang Jillian M., Zhou Gabriel, Ratharanjan Kunalan, Plale Beth, Haga Jason, Leach Jan E., Ruiz Manuel, Thomson Michael J., Alexandrov Nickolai, Larmande Pierre, Kretzschmar Tobias, Mauleon Ramil P.. 2019. GigaScience, 8 (5) : pp. 1-14.
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The bracteatus pineapple genome and domestication of clonally propagated crops. Chen Li-Yu, VanBuren Robert, Paris Margot, Zhou Hongye, Zhang Xingtan, Wai Ching Man, Yan Hansong, Chen Shuai, Alonge Michael, Ramakrishnan Srividya, Liao Zhenyang, Liu Juan, Lin Jishan, Yue Jingjing, Fatima Mahpara, Lin Zhicong, Zhang Jisen, Huang Lixian, Wang Hao, Hwa Teh-Yang, Kao Shu-Min, Choi Jae Young, Sharma Anupma, Song Jian, Wang Lulu, Yim Won C., Cushman John C., Paull Robert E., Matsumoto Tracie, Qin Yuan, Wu Qingsong, Wang Jianping, Yu Qingyi, Wu Jun, Zhang Shaoling, Boches Peter, Tung Chih-Wei, Wang Ming-Li, Coppens D'Eeckenbrugge Geo, Sanewski Garth M., Purugganan Michael D., Schatz Michael C., Bennetzen Jeffrey L., Lexer Christian, Ming Ray. 2019. Nature Genetics, 51 (10) : pp. 1549-1558.
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2018

Autosomal and mitochondrial adaptation following admixture: a case study on the honeybees of Reunion Island. Wragg David, Techer Maéva Angélique, Canale-Tabet Kamila, Basso Benjamin, Bidanel Jean-Pierre, Labarthe Emmanuelle, Bouchez Olivier, Le Conte Yves, Clémencet Johanna, Delatte Hélène, Vignal Alain. 2018. Genome Biology and Evolution, 10 (1) : pp. 220-238.
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CRISPR/Cas9-mediated efficient targeted mutagenesis has the potential to accelerate the domestication of Coffea canephora. Breitler Jean-Christophe, Dechamp Eveline, Campa Claudine, Rodrigues Leonardo Augusto Zebral, Guyot Romain, Marraccini Pierre, Etienne Hervé. 2018. Plant Cell, Tissue and Organ Culture, 134 (3) : pp. 383-394.
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Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps. Belser Caroline, Istace Benjamin, Denis Erwan, Dubarry Marion, Baurens Franc-Christophe, Falentin Cyril, Genete Mathieu, Berrabah Wahiba, Chèvre Anne-Marie, Delourme Régine, Deniot Gwenaëlle, Denoeud France, Duffé Philippe, Engelen Stefan, Lemainque Arnaud, Manzanares-Dauleux Maria J., Martin Guillaume, Morice Jérôme, Noël Benjamin, Vekemans Xavier, D'Hont Angélique, Rousseau-Gueutin Mathieu, Barbe Valérie, Cruaud Corinne, Wincker Patrick, Aury Jean-Marc. 2018. Nature Plants, 4 (11) : pp. 879-887.
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Genome-wide association study reveals candidate genes influencing lipids and diterpenes contents in Coffea arabica L. Sant'ana Gustavo Cesar, Pereira Luiz Filipe P., Pot David, Ivamoto Suzana Tiemi, Domingues Douglas S., Ferreira Rafaelle V., Pagiatto Natalia Ferrarezi, da Silva Bruna S.R., Nogueira Lívia M., Kitzberger Cíntia S.G., Scholz Maria Brigida dos Santos, de Oliveira Fernanda F., Sera Gustavo, Padilha Lilian, Labouisse Jean-Pierre, Guyot Romain, Charmetant Pierre, Leroy Thierry. 2018. Scientific Reports, 8:465, 12 p.
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Genomics of the origin and evolution of Citrus. Wu Guohong Albert, Terol Javier F., Ibáñez Victoria, López-García Antonio, Pérez-Román Estela, Borredá Carles, Domingo Concha, Tadeo Francisco, Carbonell-Caballero Jose, Alonso Roberto, Curk Franck, Du Dongliang, Ollitrault Patrick, Roose Mikeal L., Dopazo Joaquin, Gmitter Frederick G., Rokhsar Daniel S., Talon Manuel. 2018. Nature, 554 (7692) : pp. 311-136.
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Nanovirus‐alphasatellite complex identi ed in Vicia cracca in the Rhône delta region of France. Gallet Romain, Kraberger Simona, Filloux Denis, Galzi Serge, Fontes Hugo, Martin Darren Patrick, Varsani Arvind, Roumagnac Philippe. 2018. Archives of Virology, 163 (3) : pp. 695-700.
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Oak genome reveals facets of long lifespan. Plomion Christophe, Aury Jean-Marc, Amselem Joelle, Leroy Thibault, Murat Florent, Duplessis Sébastien, Faye Sébastien, Francillonne Nicolas, Labadie Karine, Le Provost Grégoire, Lesur Isabelle, Bartholome Jérôme, Faivre-Rampant Odile, Kohler Annegret, Leplé Jean-Charles, Chantret Nathalie, Chen Jun, Diévart Anne, et al.. 2018. Nature Plants, 4 : pp. 440-452.
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Présence sur l'île de La Réunion de deux espèces de Punaises prédatrices potentiellement utilisables pour la lutte biologique : Orius naivashae et Cyrtopeltis callosus (Hemiptera, Anthocoridae et Miridae). Streito Jean-Claude, Fontaine Olivier, Atiama Morguen, Genson Gwenaëlle, Pierre Eric, Sadeyen Joëlle, Frago Enric, Nibouche Samuel. 2018. Bulletin de la Société Entomologique de France, 123 (1) : pp. 29-42.
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Response to early drought stress and identification of QTLs controlling biomass production under drought in pearl millet. Debieu Maryline, Sine Bassirou, Passot Sixtine, Grondin Alexandre, Akata Eyanawa, Gangashetty Prakash, Vadez Vincent, Gantet Pascal, Foncéka Daniel, Cournac Laurent, Hash Charles Thomas, Kane Ndjido Ardo, Vigouroux Yves, Laplaze Laurent. 2018. PloS One, 13 (10):e0201635, 19 p.
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Three new genome assemblies support a rapid radiation in Musa acuminata (wild banana). Rouard Mathieu, Droc Gaëtan, Martin Guillaume, Sardos Julie, Hueber Yann, Guignon Valentin, Cenci Alberto, Geigle B., Hibbins M.S., Yahiaoui Nabila, Baurens Franc-Christophe, Berry V., Hahn M.W., D'Hont Angélique, Roux Nicolas. 2018. Genome Biology and Evolution, 10 (12) : pp. 3129-3140.
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A mosaic monoploid reference sequence for the highly complex genome of sugarcane. Garsmeur Olivier, Droc Gaëtan, Antonise Rudie, Grimwood Jane, Potier Bernard, Aitken Karen S., Jenkins Jerry, Martin Guillaume, Charron Carine, Hervouet Catherine, Costet Laurent, Yahiaoui Nabila, Healey Adam, Sims David, Cherukuri Yesesri, Sreedasyam Avinash, Kilian Andrzej, Chan Agnes P., Van Sluys Marie-Anne, Swaminathan Kankshita, Town Christopher, Berges Hélène, Simmons Blake, Glaszmann Jean-Christophe, Van der Vossen Edwin, Henry Robert, Schmutz Jeremy, D'Hont Angélique. 2018. Nature Communications, 9:2638, 10 p.
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2017

Complete genome sequences of six copper-resistant Xanthomonas citri pv. citri strains causing Asiatic citrus canker, obtained using long-read technology. Richard Damien, Boyer Claudine, Vernière Christian, Canteros B.I., Lefeuvre Pierre, Pruvost Olivier. 2017. Genome Announcements, 5 (12):e00010-17, 2 p.
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Diversité et origine génétique des espèces de la sous famille des Aurantioideae et décryptage des structures interspécifiques des génomes des agrumes modernes. Oueslati Bahri Amel. 2017. Tunis : Université de Tunis El Manar, 200 p. Thèse de doctorat : Biologie. Génétique et biologie moléculaire : Université de Tunis El Manar
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Evolution of the banana genome (Musa acuminata) is impacted by large chromosomal translocations. Martin Guillaume, Carreel Françoise, Coriton Olivier, Hervouet Catherine, Cardi Céline, Derouault Paco, Roques Danièle, Salmon Frédéric, Rouard Mathieu, Sardos Julie, Labadie Karine, Baurens Franc-Christophe, D'Hont Angélique. 2017. Molecular Biology and Evolution, 34 (9), 28 p.
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Genome sequences of a capulavirus infecting Plantago lanceolata in the Aland archipelago of Finland. Susi Hanna, Laine Anna-Liisa, Filloux Denis, Kraberger Simona, Farkas Kata, Bernardo Pauline, Frilander Mikko J., Martin Darren Patrick, Varsani Arvind, Roumagnac Philippe. 2017. Archives of Virology, 162 (7) : pp. 2041-2045.
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Genome sequencing of the sweetpotato whitefly Bemisia tabaci MED/Q. Xie Wen, Chen Chunhai, Yang Zezhong, Guo Litao, Yang Xin, Wang Dan, Chen Ming, Huang Jinqun, Wen Yanan, Zeng Yang, Liu Yating, Xia Jixing, Tian Lixia, Cui Hongying, Wu Qingjun, Wang Shaoli, Wu Baoyun, Li Xianchiun, Tan Xinqiu, Ghanim Murad, Qiu Baoli, Pan Huipeng, Chu Dong, Delatte Hélène, Maruthi M.N., Ge Feng, Zhou Xueping, Wang Xiaowei, Wan Fanghao, Du Yuzhou, Luo Chen, Yan Fengming, Preisser Evan L., Jiao Xiaoguo, Coates Brad S., Zhao Jinyang, Gao Qiang, Xia Jinquan, Yin Ye, Liu Yong, Brown Judith, Zhou Xuguo-Joe, Zhang Youjun. 2017. GigaScience, 6 (5), 7 p.
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Genome size, cytogenetic data and transferability of EST-SSRs markers in wild and cultivated species of the genus Theobroma L. (Byttnerioideae, Malvaceae). da Silva Rangeline Azevedo, Souza Gustavo, Lemos Lívia Santos Lima, Lopes Uilson Vanderlei, Patrocinio Nara Geórgia Ribeiro Braz, Alves Rafael Moyses, Marcellino Lucilia Helena, Clément Didier, Micheli Fabienne, Gramacho Karina Peres. 2017. PloS One, 12 (2):e0170799, 15 p.
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Genome-wide association mapping for root cone angle in rice. Bettembourg Mathilde, Dardou Audrey, Audebert Alain, Thomas Emilie, Frouin Julien, Guiderdoni Emmanuel, Ahmadi Nourollah, Perin Christophe, Dievart Anne, Courtois Brigitte. 2017. Rice, 10:45, 17 p.
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Genome-wide identification and characterization of cacao WRKY transcription factors and analysis of their expression in response to witches' broom disease. Silva Monteiro de Almeida Dayanne, Do Amaral Daniel Oliveira Jordão, Del-Bem Luiz-Eduardo, Bronze dos Santos Emily, Santana Silva Raner José, Peres Gramacho Karina, Vincentz Michel, Micheli Fabienne. 2017. PloS One, 12 (10):e0187346, 23 p.
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ICTV virus taxonomy profile: Geminiviridae. Zerbini F. Murilo, Briddon Rob W., Idris Ali, Martin Darren Patrick, Moriones Enrique, Navas-Castillo Jesús, Rivera-Bustamante Rafael, Roumagnac Philippe, Varsani Arvind. 2017. Journal of General Virology, 98 : pp. 131-133.
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Le génome du cacaoyer : du décodage de sa séquence jusqu'à l'étude de gènes impliqués dans des caractères agronomiques d'intérêt. Argout Xavier. 2017. Montpellier : Montpellier SupAgro, 238 p. Thèse de doctorat : Biologie, interactions, diversité adaptative des plantes : Montpellier SupAgro
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MGIS: Managing banana (Musa spp.) genetic resources information and high-throughput genotyping data. Ruas Max, Guignon Valentin, Sempere Guilhem, Sardos Julie, Hueber Yann, Duvergey H., Andrieu A., Chase Rachel, Jenny Christophe, Hazekamp T., Irish B., Jelali K., Adeka J., Ayala-Silva T., Chao C.P., Daniells J., Dowiya B., Effa Effa B., Gueco L., Herradura L., Ibobondji L., Kempenaers E., Kilangi J., Muhangi S., Ngo Xuan P., Paofa J., Pavis Claude, Thiemele D., Tossou Christophe, Sandoval J.A., Sutanto A., Vangu Paka G., Yi G., Van Den Houwe Ines, Roux Nicolas, Rouard Mathieu. 2017. Database, 2017:bax046, 12 p.
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Molecular genetics and breeding. Soh Aik Chin, Mayes Sean, Roberts Jeremy, Zaki Noorhariza Mohd, Madon Maria, Schwarzacher Trude, Heslop-Harrison Pat, Ithnin Maizura Bint, Din Amiruddin Mohd, Ramli Umi Salamah, Othman Abrizah, Zulkifli Yaakub, Low Eng Ti Leslie, Ong-Abdullah Meilina, Singh Rajinder, Teh Chee Keng, Kwong Qi Bin, Ong Ail Ling, Mohamed Mohaimi, Apparow Sukganah, Chew Fook Tim, Appleton David Ross, Kulaveerasingam Harikrishna, Teh Huey Fang, Mebus Katharina, Neoh Bee Keat, Ooi Tony Eng Keong, Wong Yick Ching, Cros David. 2017. In : Oil palm breeding : genetics and genomics. Soh Aik Chin (ed.), Mayes Sean (ed.) , Roberts Jeremy A. (ed.). Boca Raton : CRC Press, pp. 225-281. ISBN 978-1-4987-1544-7
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Morphological characterization in the genus Passiflora L.: An approach to understanding its complex variability. Ocampo Perez John Albeiro, Coppens D'Eeckenbrugge Geo. 2017. Plant Systematics and Evolution, 303 (4) : pp. 531-558.
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New strains of chickpea chlorotic dwarf virus discovered on diseased papaya and tomato plants in Burkina Faso. Ouattara Alassane, Tiendrebeogo Fidèle, Lefeuvre Pierre, Hoareau Murielle, Claverie Sohini, Traoré Edgar Valentin, Barro Nicolas, Traoré Oumar, Varsani Arvind, Lett Jean-Michel. 2017. Archives of Virology, 162 (6) : pp. 1791-1794.
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Occurrence of a novel mastrevirus in sugarcane germplasm collections in Florida, Guadeloupe and Réunion. Boukari Wardatou, Alcala-Briseño Ricardo I., Kraberger Simona, Fernandez Emmanuel, Filloux Denis, Daugrois Jean-Heinrich, Comstock Jack C., Lett Jean-Michel, Martin Darren Patrick, Varsani Arvind, Roumagnac Philippe, Polston Jane E., Rott Philippe. 2017. Virology Journal, 14:146, 8 p.
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Phytophthora megakarya and Phytophthora palmivora, closely related causal agents of cacao black pod rot, underwent increases in genome sizes and gene numbers by different mechanisms. Ali Shahin, Shao Jonathan, Lary David J., Kronmiller Brent A., Shen Danyu, Strem Mary, Amoako-Attah Ishmael, Yaw Akrofi Andrew, Begoude Dider, Ten Hoopen Gerben Martijn, Coulibaly Klotioloma, Kébé Boubacar Ismaël, Melnick Rachel L., Guiltinan Mark J., Tyler Brett, Meinhardt Lyndel W., Bailey Bryan. 2017. Genome Biology and Evolution, 9 (3) : pp. 536-557.
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Targeted promoter editing for rice resistance to Xanthomonas oryzae pv. oryzae reveals differential activities for SWEET14-inducing TAL effectors. Blanvillain-Baufumé Servane, Reschke Maik, Solé Montserrat, Auguy Florence, Doucoure Hinda, Szurek Boris, Meynard Donaldo, Portefaix Murielle, Cunnac Sébastien, Guiderdoni Emmanuel, Boch Jen, Koebnik Ralf. 2017. Plant Biotechnology Journal, 15 (3) : pp. 306-317.
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Tomato leaf curl Burkina Faso virus: A novel tomato-infecting monopartite begomovirus from Burkina Faso. Ouattara Alassane, Tiendrebeogo Fidèle, Lefeuvre Pierre, Claverie Sohini, Hoareau Murielle, Traoré Edgar Valentin, Barro Nicolas, Traoré Oumar, Lett Jean-Michel. 2017. Archives of Virology, 162 (5) : pp. 1427-1429.
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Torix group Rickettsia are widespread in Culicoides biting midges (Diptera: Ceratopogonidae), reach high frequency and carry unique genomic features. Pilgrim Jack, Ander Mats, Garros Claire, Baylis Matthew, Hurst Gregory D.D., Siozos Stefanos. 2017. Environmental Microbiology, 19 (10), n.spéc. Pathogen and Drug Resistance Ecology : pp. 4238-4255.
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The cacao Criollo genome v2.0: An improved version of the genome for genetic and functional genomic studies. Argout Xavier, Martin Guillaume, Droc Gaëtan, Fouet Olivier, Labadie Karine, Rivals Eric, Aury Jean-Marc, Lanaud Claire. 2017. BMC Genomics, 18:730, 9 p.
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The genome draft of coconut (Cocos nucifera). Xiao Yong, Xu Pengwei, Fan Haikuo, Baudouin Luc, Xia Wei, Bocs Stéphanie, Xu Junyang, Li Qiong, Guo Anping, Zhou Lixia, Li Jing, Wu Yi, Ma Zilong, Armero Villanueva Alix Augusto, Issali Auguste Emmanuel, Liu Na, Peng Ming, Yang Yaodong. 2017. GigaScience, 6 (11), 11 p.
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A la découverte des agents pathogènes et microorganismes des tiques de la Caraïbe par séquençage de nouvelle génération et PCR microfluidique en temps réel. Gondard Mathilde. 2017. Champs-sur-Marne : Université Paris-Est, 286 p. Thèse de doctorat : Sciences de la vie et de la santé : Université Paris-Est
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2016

Association mapping for Phytophthora pod rot resistance in a cacao (Theobroma cacao L.) population grown in farmers' field. Efombagn Mousseni Ives Bruno, Sounigo Olivier, Courtois Brigitte, Fouet Olivier, Jeanneau Mélanie, Lemainque Arnaud, Pavek Sylvana, Lanaud Claire. 2016. International Journal of Agriculture and Biosciences, 5 (6) : pp. 329-336.
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Association mapping of resistance to rice blast in upland field conditions. Raboin Louis-Marie, Ballini Elsa, Tharreau Didier, Ramanantsoanirina Alain, Frouin Julien, Courtois Brigitte, Ahmadi Nourollah. 2016. Rice, 9 (59), 12 p.
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Cacao Swollen Shoot Virus (CSSV): History, Biology, and Genome. Muller Emmanuelle. 2016. In : Cacao diseases. A history of old enemies and new encounters. Bryan A. Bailey (ed.), Lyndel W. Meinhardt (ed.). Cham : Springer International Publishing, pp. 337-358. ISBN 978-3-319-24787-8
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Combating a global threat to a clonal crop: Banana black sigatoka pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) genomes reveal clues for disease control. Arango Isaza Rafael E., Diaz-Trujillo Caucasella, Dhillon Braham, Aerts Andrea, Carlier Jean, Crane Charles F., de Jong Tristan V., De Vries Ineke, Dietrich Robert, Farmer Andrew, Fortes Fereira Claudia, Garcia Suzana, Guzman Mauricio, Hamelin Richard C., Lindquist Erika, Mehrabi Rahim, Quiros Madrigal Olman, Schmutz Jeremy, Shapiro Harris, Reynolds Elizabeth, Scalliet Gabriel, Souza Manoel, Stergiopoulos Ioannis, Van der Lee Theo A.J., De Wit Pierre J. G. M., Zapater Marie-Françoise, Zwiers Lute-Harm, Grigoriev Igor, Goodwin Stephen B., Kema Gert H.J.. 2016. PLoS Genetics, 12 (8):e1005876, 36 p.
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Development of single nucleotide polymorphism markers in the large and complex rubber tree genome using next-generation sequence data. Moura De Souza Livia, Toledo-Silva Guilherme, Cardoso-Silva Claudio Benicio, Da Silva Carla Cristina, De Araujo Andreotti Isabella, Oliveira Conson André Ricardo, Mantello Camilia Campos, Le Guen Vincent, Pereira de Souza Anete. 2016. Molecular Breeding, 36 (8):115, 10 p.
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Draft genome sequences of nine strains of Ralstonia solanacearum differing in virulence to eggplant (Solanum melongena). Guinard Jérémy, Vinatzer Boris A., Poussier Stéphane, Lefeuvre Pierre, Wicker Emmanuel. 2016. Genome Announcements, 4 (1):e01415, 15 p.
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Emergence of lineage IV peste des petits ruminants virus in Ethiopia: Complete genome sequence of an Ethiopian isolate 2010. Muniraju Murali, Mahapatra Mana, Ayelet Gelagay, Babu A., Olivier G., Munir M., Libeau Geneviève, Batten Carrie, Banyard Ashley C., Parida Satya. 2016. Transboundary and Emerging Diseases, 63 (4) : pp. 435-442.
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Gene coexpression network analysis of oil biosynthesis in an interspecific backcross of oil palm. Guérin Chloé, Joët Thierry, Serret Julien, Lashermes Philippe, Vaissayre Virginie, Agbessi Mawussé D.T., Beulé Thierry, Severac Dany, Amblard Philippe, Tregear James, Durand-Gasselin Tristan, Morcillo Fabienne, Dussert Stéphane. 2016. Plant Journal, 87 (5) : pp. 423-441.
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Genome-wide association mapping for root traits in a panel of rice accessions from Vietnam. Phung Nhung Thi Phuong, Mai Chung Duc, Hoang Giang Thi, Truong Hue Thi Minh, Lavarenne Jeremy, Gonin Mathieu, Nguyen Khanh L., Ha Thuy Thi, Do Vinh Nang, Gantet Pascal, Courtois Brigitte. 2016. BMC Plant Biology, 16 (1), 19 p.
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Genome-wide variation in recombination rate in Eucalyptus. Gion Jean-Marc, Hudson Corey J., Lesur Isabelle, Vaillancourt René E., Potts Brad M., Freeman Jules S.. 2016. BMC Genomics, 17 (590), 12 p.
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Genomic and proteomic evidence supporting the division of the plant pathogen Ralstonia solanacearum into three species. Prior Philippe, Ailloud Florent, Dalsing Beth, Remenant Benoit, Sanchez Borja, Allen Caitilyn. 2016. BMC Genomics, 17 (1), 11 p.
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Gigwa—Genotype investigator for genome-wide analyses. Sempere Guilhem, Philippe Florian, Dereeper Alexis, Ruiz Manuel, Sarah Gautier, Larmande Pierre. 2016. GigaScience, 5 (25), 9 p.
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Healthy tropical plants to mitigate the impact of climate change - as exemplified in coffee. Bertrand Benoît, Marraccini Pierre, Villain Luc, Breitler Jean-Christophe, Etienne Hervé. 2016. In : Climate change and agriculture worldwide. Torquebiau Emmanuel (ed.), Manley David (trad.), Cowan Paul (trad.). Heidelberg : Springer, pp. 83-95. ISBN 978-94-017-7460-4
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The Hevea brasiliensis XIP aquaporin subfamily: Genomic, structural and functional characterizations with relevance to intensive latex harvesting. Lopez David, Ben Amira Maroua, Brown Daniel, Muries Beatriz, Brunel-Michac Nicole, Bourgerie Sylvain, Porcheron Benoit, Lemoine Remi, Chrestin Hervé, Mollison Ewan, Di Cola Alessandra, Frigerio Lorenzo, Julien Jean-Louis, Gousset-Dupont Aurélie, Fumanal Boris, Label Philippe, Pujade-Renaud Valérie, Auguin Daniel, Venisse Jean-Stéphane. 2016. Plant Molecular Biology, 91 (4-5) : pp. 375-396.
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Improvement of the banana Musa acuminata reference sequence using NGS data and semi-automated bioinformatics methods. Martin Guillaume, Baurens Franc-Christophe, Droc Gaëtan, Rouard Mathieu, Cenci Alberto, Kilian Andrzej, Hastie Alex, Dolezelova M., Aury Jean-Marc, Alberti Adriana, Carreel Françoise, D'Hont Angélique. 2016. BMC Genomics, 17 (243), 12 p.
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Ongoing geographical spread of Tomato yellow leaf curl virus. Mabvakure Batsirai, Martin Darren Patrick, Kraberger Simona, Cloete Leendert, van Brunschot Sharon, Geering Andrew D., Thomas John, Bananej Kaveh, Lett Jean-Michel, Lefeuvre Pierre, Varsani Arvind, Harkins Gordon William. 2016. Virology, 498 : pp. 257-264.
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Phylogenetic origin of limes and lemons revealed by cytoplasmic and nuclear markers. Curk Franck, Ollitrault Frédérique, Garcia-Lor Andrés, Luro François, Navarro Luis, Ollitrault Patrick. 2016. Annals of Botany, 117 (4) : pp. 565-583.

Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity. Bredeson Jessen V., Lyons Jessica B., Prochnik Simon, Wu Guohong Albert, Ha Cindy M., Edsinger-Gonzales Eric, Grimwood Jane, Schmutz Jeremy, Rabbi Ismail Y., Egesi Chiedozie, Nauluvula Poasa, Lebot Vincent, Ndunguru Joseph, Mkamilo Geoffrey, Bart Rebecca, Setter Tim, Gleadow Roslyn M., Kulakow Peter, Ferguson Morag E., Rounsley Steve, Rokhsar Daniel S.. 2016. Nature Biotechnology, 34 (5) : pp. 562-570.
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Shotgun sequencing of the mitochondrial genome of the Aldabra giant tortoise (Aldabrachelys gigantea). Besnard Guillaume, Thèves Catherine, Mata Xavier, Holota Hélène, Rakotozafy Lucien M.A., Pedrono Miguel. 2016. Mitochondrial DNA. Part A, 27 (6) : pp. 4543-4544.
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Whole-genome sequences of Xanthomonas euvesicatoria strains clarify taxonomy and reveal a stepwise erosion of type 3 effectors. Barak Jeri D., Vancheva Taca, Lefeuvre Pierre, Jones Jeffrey B., Timilsina Sujan, Minsavage Gerald V., Vallad Gary E., Koebnik Ralf. 2016. Frontiers in Plant Science, 7 (1805), 12 p.
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A genome-wide association study on the seedless phenotype in banana (Musa spp.) reveals the potential of a selected panel to detect candidate genes in a vegetatively propagated crop. Sardos Julie, Rouard Mathieu, Hueber Yann, Cenci Alberto, Hyma Katie E., Van Den Houwe Ines, Hribova Eva, Courtois Brigitte, Roux Nicolas. 2016. PloS One, 11 (5):e0154448, 25 p.
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The rubber tree genome reveals new insights into rubber production and species adaptation. Tang Chaorong, Yang Meng, Fang Yongjun, Luo Yingfeng, Gao Shenghan, Xiao Xiaohu, An Zewei, Zhou Binhui, Zhang Bing, Tan Xinyu, Yeang Hoong Yeet, Qin Yunxia, Yang Jianghua, Lin Qiang, Mei Hailiang, Montoro Pascal, Long Xiangyu, Qi Jiyan, Hua Yuwei, He Zilong, Sun Min, Li Wenjie, Zeng Xia, Cheng Han, Liu Ying, Yang Jin, Tian Weimin, Zhuang Nansheng, Zeng Rizhong, Li Dejun, He Peng, Li Zhe, Zou Zhi, Li Shuangli, Li Chenji, Wang Jixiang, Wei Dong, Lai Chao-Qiang, Luo Wei, Yu Jun, Hu Songnian, Huang Huasun. 2016. Nature Plants, 10 p.
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2015

Clade- and species-specific features of genome evolution in the Saccharomycetaceae. Wolfe Kenneth H., Armisén David, Proux-Wera Estelle, ÓhÉigeartaigh Seán S., Azam Haleema, Gordon Jonathan, Byrne Kevin P.. 2015. FEMS Yeast Research, 15 (5), 12 p.
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Comparative genomic analysis of Ralstonia solanacearum reveals candidate genes for host specificity. Ailloud Florent, Lowe Tiffany, Cellier Gilles, Roche David, Allen Caitilyn, Prior Philippe. 2015. BMC Genomics, 16 (270), 11 p.
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Comparative genomics of 43 strains of Xanthomonas citri pv. citri reveals the evolutionary events giving rise to pathotypes with different host ranges. Gordon Jonathan, Lefeuvre Pierre, Escalon Aline, Barbe Valérie, Cruveiller Stéphane, Gagnevin Lionel, Pruvost Olivier. 2015. BMC Genomics, 16 (1098), 20 p.
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Comparative genomics of a cannabis pathogen reveals insight into the evolution of pathogenicity in Xanthomonas. Jacobs Jonathan M., Pesce Céline, Lefeuvre Pierre, Koebnik Ralf. 2015. Frontiers in Plant Science, 6 (431), 13 p.
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Deciphering genome content and evolutionary relationships of isolates from the fungus Magnaporthe oryzae attacking different host plants. Chiapello Hélène, Mallet Ludovic, Guerin Cyprien, Aguileta Gabriela, Amselem Joelle, Kroj Thomas, Ortega-Abboud Enrique, Lebrun Marc-Henri, Henrissat Bernard, Gendrault Annie, Rodolphe François, Tharreau Didier, Fournier Elisabeth. 2015. Genome Biology and Evolution, 7 (10) : pp. 2896-2912.
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Diffusion d'un virus et évolution de son génome dans les ruminants domestiques : Application à l'épidémiosurveillance de la "Peste des petits ruminants". Salami Habib. 2015. Montpellier : UM2, 125 p. Thèse de doctorat : Systèmes intégrés en biologie, agronomie, géosciences, hydrosciences et environnement (SIBAGHE). Microbiologie parasitologie : Université Montpellier 2
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Draft genome sequence of Xanthomonas sacchari strain LMG 476. Pieretti Isabelle, Bolot Stéphanie, Carrère Sébastien, Barbe Valérie, Cociancich Stéphane, Rott Philippe, Royer Monique. 2015. Genome Announcements, 3 (2):e00146, 2 p.
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Draft genome sequences of two Xanthomonas euvesicatoria strains from the Balkan Peninsula. Vancheva Taca, Lefeuvre Pierre, Bogatzevska Nevena, Moncheva Penka, Koebnik Ralf. 2015. Genome Announcements, 3 (1):e01528, 2 p.
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Draft genome sequences of two Xanthomonas vesicatoria strains from the Balkan peninsula. Vancheva Taca, Bogatzevska Nevena, Moncheva Penka, Lefeuvre Pierre, Koebnik Ralf. 2015. Genome Announcements, 3 (1):e01558-14, 2 p.
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EucaMaps: linking genetic maps and associated QTLs to the Eucalyptus grandis genome. Gion Jean-Marc, Chaumeil Philippe, Plomion Christophe. 2015. Tree Genetics and Genomes, 11 (795), 7 p.
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Evidence of intense chromosomal shuffling during conifer evolution. de Miguel Marina, Bartholomé Jérôme, Ehrenmann François, Murat Florent, Moriguchi Yoshinari, Uchiyama Kentaro, Ueno Saneyoshi, Tsumura Yoshihiko, Lagraulet Hélène, de Maria Nuria, Cabezas José-Antonio, Cervera María-Teresa, Gion Jean-Marc, Salse Jérôme, Plomion Christophe. 2015. Genome Biology and Evolution, 7 (1) : pp. 2799-2809.
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First external quality assessment of molecular and serological detection of rift Valley Fever in the Western Mediterranean Region. Monaco Federica, Cosseddu Gian Mario, Doumbia Baba, Madani Hafsa, El Mellouli Fatiha, Jimenez Clavero Michel Angel, Sghaier Soufien, Marianneau Philippe, Cetre-Sossah Catherine, Polci Andrea, Lacote Sandra, Lakhdar Magtouf, Fernandez-Pinero Jovita, Sari Nassim Chabane, Pinoni Chiara, Capobianco Dondona Andrea, Gallardo Carmina, Bouzid Taoufiq, Conte Ann Amaria, Bortone Grazia, Petrini Anotnio, Puech Lilian. 2015. PloS One, 10 (11):e0142129, 13 p.
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Full genome sequence analysis of two isolates reveals a novel Xanthomonas species close to the sugarcane pathogen Xanthomonas albilineans. Pieretti Isabelle, Cociancich Stéphane, Bolot Stéphanie, Carrère Sébastien, Morisset Alexandre, Rott Philippe, Royer Monique. 2015. Genes, 6 (3) : pp. 714-733.
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Genome and phylogenetic analyses of Trypanosoma evansi reveal extensive similarity to T. brucei and multiple independent origins for dyskinetoplasty. Carnes Jason, Anupama Atashi, Balmer Olivier, Jackson Andrew, Lewis Michael, Brown Rob, Cestari Igor, Desquesnes Marc, Gendrin Claire, Hertz-Fowler Christiane, Imamura Hideo, Ivens Alasdair, Koreny Ludek, Lai De-Hua, MacLeod Annette, McDermott Suzanne M., Merritt Chris, Monnerat Severine, Moon Wonjong, Myler Peter, Phan Isabelle, Ramasamy Gowthaman, Sivam Dhileep, Lun Zhao-Rong, Lukes Julius, Stuart Ken, Schnaufer Achim. 2015. PLoS Neglected Tropical Diseases, 9 (1):e3404, 21 p.
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Genome-enabled phylogeographic investigation of the quarantine pathogen Ralstonia solanacearum race 3 biovar 2 and screening for sources of resistance against its Core effectors. Clarke Christopher R., Studholme David J., Hayes Byron W., Runde Brendan J., Weisberg Alexandra, Cai Rongman, Wroblewski Tadeusz, Daunay Marie-Christine, Wicker Emmanuel, Castillo Jose A., Vinatzer Boris A.. 2015. Phytopathology, 105 (5) : pp. 597-607.
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Genome-wide analysis of LTR-retrotransposons in oil palm. Beulé Thierry, Agbessi Mawussé, Dussert Stéphane, Jaligot Estelle, Guyot Romain. 2015. BMC Genomics, 16 (795), 14 p.
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Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome. Roux Brice, Bolot Stéphanie, Guy Endrick, Denancé Nicolas, Lautier Martine, Jardinaud Marie-Françoise, Fischer-Le-Caux Marion, Portier Perrine, Jacques Marie Agnès, Gagnevin Lionel, Pruvost Olivier, Lauber Emmanuelle, Arlat Mathieu, Carrère Sébastien, Koebnik Ralf, Noel Laurent D.. 2015. BMC Genomics, 16 (975), 19 p.
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High-Quality Draft Genome Sequence of the Xanthomonas translucens pv. cerealis Pathotype Strain CFBP 2541. Pesce Céline, Bolot Stéphanie, Cunnac Sébastien, Portier Perrine, Fischer-Le-Caux Marion, Jacques Marie Agnès, Gagnevin Lionel, Arlat Mathieu, Noel Laurent D., Carrère Sébastien, Bragard Claude, Koebnik Ralf. 2015. Genome Announcements, 3 (1):e0157414, 2 p.
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High-resolution genetic maps of Eucalyptus improve Eucalyptus grandis genome assembly. Bartholomé Jérôme, Mandrou Eric, Mabiala André, Jenkins Jerry, Nabihoudine Ibouniyamine, Klopp Christophe, Schmutz Jeremy, Plomion Christophe, Gion Jean-Marc. 2015. New Phytologist, 206 (4), n.spéc. Featured papers on 'Eucalyptus genome' : pp. 1283-1296.
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Identification and development of new polymorphic microsatellite markers using genome assembly for Ganoderma boninense, causal agent of oil palm basal stem rot disease. Merciere Maxime, Laybats Anthony, Carasco-Lacombe Catherine, Tan Joon Sheong, Klopp Christophe, Durand-Gasselin Tristan, Alwee Sharifah Shahrul Rabiah Syed, Camus-Kulandaivelu Létizia, Breton Frédéric. 2015. Mycological Progress, 14 (11):103, 11 p.
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In Silico analysis of usher encoding genes in Klebsiella pneumoniae and characterization of their role in adhesion and colonization. Khater Fida, Balestrino Damien, Charbonnel Nicolas, Dufayard Jean-François, Brisse Sylvain, Forestier Christianne. 2015. PloS One, 10 (3):e0116215, 24 p.
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La bonne santé des plantes tropicales pour atténuer les effets du changement climatique: l'exemple du caféier. Bertrand Benoît, Marraccini Pierre, Villain Luc, Breitler Jean-Christophe, Etienne Hervé. 2015. In : Changement climatique et agricultures du monde. Torquebiau Emmanuel (ed.). Versailles : Ed. Quae, pp. 84-95. (Agricultures et défis du monde)
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Multilocus sequence analysis of xanthomonads causing bacterial spot of tomato and pepper plants reveals strains generated by recombination among species and recent global spread of Xanthomonas gardneri. Timilsina Sujan, Jibrin Mustafa O., Potnis Neha, Minsavage Gerald V., Kebede Misrak, Schwartz Allison, Bart Rebecca, Staskawicz Brian, Boyer Claudine, Vallad Gary E., Pruvost Olivier, Jones Jeffrey R., Goss Erica. 2015. Applied and Environmental Microbiology, 81 (4) : pp. 1520-1529.
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New multilocus variable-number tandem-repeat analysis tool for surveillance and local epidemiology of bacterial leaf blight and bacterial leaf streak of rice caused by Xanthomonas oryzae. Poulin Lucie, Grygiel Pierre, Magne Maxime, Gagnevin Lionel, Rodríguez-R Luis Miguel, Forero Serna Natalia, Zhao Shuai, El Rafil M., Dao S., Tekete C., Wonni Issa, Kolta O., Pruvost Olivier, Verdier Valérie, Vernière Christian, Koebnik Ralf. 2015. Applied and Environmental Microbiology, 81 (2) : pp. 688-698.
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Orientia tsutsugamushi, agent of scrub typhus, displays a single metapopulation with maintenance of ancestral haplotypes throughout continental South East Asia. Wongprompitak Patimaporn, Duong Veasna, Anukool Wichittra, Sreyrath Lay, Mai Trinh Thi Xuan, Gavotte Laurent, Moulia Catherine, Cornillot Emmanuel, Ekpo Pattama, Suputtamongkol Yupin, Buchy Philippe, Frutos Roger. 2015. Infection, Genetics and Evolution, 31 : pp. 1-8.
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Ploidy and domestication are associated with genome size variation in palms. Gunn Bee, Baudouin Luc, Beulé Thierry, Ilbert Pascal, Duperray Christophe, Crisp Michael, Issali Auguste Emmanuel, Konan Jean-Louis, Rival Alain. 2015. American Journal of Botany, 102 (10) : pp. 1625-1633.

Site and Saccharum spontaneum introgression level drive sugarcane yield component traits and their impact on sucrose yield in contrasted radiation and thermal conditions in La Réunion. Gouy Matthieu, Luquet Delphine, Rouan Lauriane, Martiné Jean-François, Thong-Chane Audrey, Costet Laurent, Nibouche Samuel, Gozé Eric. 2015. Field Crops Research, 171 : pp. 99-108.
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TcCYPR04, a cacao papain-like cysteine-protease detected in senescent and necrotic tissues interacts with a cystatin TcCYS4. Cardoso Thyago Hermylly Santana, Oliveira Freitas Ana Camila, Andrade Bruno Silva, Oliveira de Sousa Aurizângela, Da Silva Santiago André, Koop Daniela Martins, Gramacho Karina Peres, Alvim Fatima Cerqueira, Micheli Fabienne, Pirovani Carlos Priminho. 2015. PloS One, 10 (12):e0144440, 20 p.
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Tomato chlorotic mottle Guyane virus: A novel tomato-infecting bipartite begomovirus from French Guiana. Lett Jean-Michel, De Bruyn Alexandre, Hoareau Murielle, Ouattara Alassane, Claverie Sohini, Dalmon Anne, Laplace Damien, Lefeuvre Pierre, Hostachy Bruno. 2015. Archives of Virology, 160 (11) : pp. 2887-2890.
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What makes Xanthomonas albilineans unique amongst xanthomonads? Pieretti Isabelle, Pesic Alexander, Petras Daniel, Royer Monique, Süssmuth Roderich, Cociancich Stéphane. 2015. Frontiers in Plant Science, 6 (289), 7 p.
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The chloroplast genome of the hexaploid Spartina maritima (Poaceae, Chloridoideae): Comparative analyses and molecular dating. Rousseau-Gueutin Mathieu, Bellot Sidonie, Martin Guillaume, Boutte Julien, Chelaifa Houda, Lima Oscar, Michon-Coudouel Sophie, Naquin Delphine, Salmon Armel, Ainouche K., Ainouche Malika Lily. 2015. Molecular Phylogenetics and Evolution, 93 : pp. 5-16.
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The coffee genome hub: a resource for coffee genomes. Dereeper Alexis, Bocs Stéphanie, Rouard Mathieu, Guignon Valentin, Ravel Sébastien, Tranchant-Dubreuil Christine, Poncet Valérie, Garsmeur Olivier, Lashermes Philippe, Droc Gaëtan. 2015. Nucleic Acids Research, 43 (D1), D1028-D1035
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The genomes of many yam species contain transcriptionally active endogenous geminiviral sequences that may be functionally expressed. Filloux Denis, Murrell Sasha, Koohapitagtam M., Golden Michael, Julian Charlotte, Galzi Serge, Uzest Marilyne, Rodier-Goud Marguerite, D'Hont Angélique, Vernerey Marie-Stéphanie, Wilkin P., Peterschmitt Michel, Winter Stephan, Murrell Ben, Martin Darren Patrick, Roumagnac Philippe. 2015. Virus Evolution, 1 (1), 17 p.
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2014

Building the sugarcane genome for biotechnology and identifying evolutionary trends. de Setta Nathalia, Monteiro-Vitorello Cláudia, Metcalfe Cushla Jane, Cruz Guilherme Marcelo Queiroga, Del Bem Luiz Eduardo, Vicentini Renato, Tebaldi Silveira Nogueira Fábio, Alvares Campos Roberta, Lima Nunes Sideny, Gasperazzo Turrini Paula Crisina, Prata Vieira Andreia, Ochoa Cruz Edgar Andrés, Silveira Corrêa Tatiana Caroline, Takeshi Hotta Carlos, de Mello Varani Alessandro, Vautrin Sonia, Silva da Trindade Adilson, de Mendonça Vilela Marianne, Gimiliani Lembke Carolina, Mieko Sato Paloma, Fandino de Andrade Rodrigo, Yutaka Nishiyama Milton, Cardoso-Silva Claudio Benicio, Castanho Scortecci Katia, Garcia Antonio Augusto Franco, Sampaio Carneiro Monalisa, Kim Changsoo, Paterson Andrew H., Berges Hélène, D'Hont Angélique, Pereira de Souza Anete, Mendes Souza Glaucia, Vincentz Michel, Kitajima João Paulo, Van Sluys Marie-Anne. 2014. BMC Genomics, 15 (540), 18 p.
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Caractérisation des différences de structures chromosomiques dans l'espèce Musa acuminata par re-séquençage ; le cas de l'accession Pahang. Martin Guillaume. 2014. Montpellier : Montpellier SupAgro, 299 p. Thèse de doctorat : Systèmes intégrés en biologie, agronomie, géosciences, hydrosciences, environnement (SIBAGHE). Biologie intégrative des plantes : Montpellier SupAgro Centre international d'études supérieures en sciences agronomiques
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Complete genome sequence of a field strain of peste des petits ruminants virus Iisolated during 2010-2014 epidemics in Senegal. Salami Habib, Croville Guillaume, Kwiatek Olivier, Mariette Jérôme, Klopp Christophe, Valière Sophie, Guerin Jean-Luc, Lo Moustapha, Thiongane Yaya, Albina Emmanuel, Libeau Geneviève. 2014. Genome Announcements, 2 (5):e00772, 2 p.
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Complete genome sequences of lineage III peste des petits ruminants viruses from the Middle East and East Africa. Muniraju Murali, Munir Muhammad, Banyard Ashley C., Ayebazibwe Chrisostom, Wensman Jonas, Zohari Siamak, Berg Mikael, Parthiban AravindhBabu R., Mahapatra Mana, Libeau Geneviève, Batten Carrie, Parida Satya. 2014. Genome Announcements, 2 (5):e01023, 2 p.
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Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies. Mariac Cédric, Scarcelli Nora, Pouzadou Juliette, Barnaud Adeline, Billot Claire, Faye Adama, Kougbeadjo Ayite, Maillol Vincent, Martin Guillaume, Sabot François, Santoni Sylvain, Vigouroux Yves, Couvreur Thomas. 2014. Molecular Ecology Resources, 14 (6) : pp. 1103-1113.
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Draft genome sequence of Xanthomonas axonopodis pv. allii strain CFBP 6369. Gagnevin Lionel, Bolot Stéphanie, Gordon Jonathan, Pruvost Olivier, Vernière Christian, Robène Isabelle, Arlat Mathieu, Noel Laurent D., Carrère Sébastien, Jacques Marie Agnès, Koebnik Ralf. 2014. Genome Announcements, 2 (4):e00727, 2 p.
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Draft genome sequence of the flagellated Xanthomonas fuscans subsp. fuscans strain CFBP 4884. Indiana Arnaud, Briand Martial, Arlat Mathieu, Gagnevin Lionel, Koebnik Ralf, Noel Laurent D., Portier Perrine, Darrasse Armelle, Jacques Marie Agnès. 2014. Genome Announcements, 2 (5):e00966, 2 p.
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Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution. Geering Andrew D., Maumus Florian, Copetti Michele, Choisne Nathalie, Zwickl Derrick J., Zytnicki Matthias, Mc Taggart Alistair R., Scalabrin Simone, Vezzulli Silvia, Wing Rod A., Quesneville Hadi, Teycheney Pierre-Yves. 2014. Nature Communications, 5 (2569), 11 p.
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Evolution of plant eukaryotic initiation factor 4E (eIF4E) and potyvirus genome-linked protein (VPg): A game of mirrors impacting resistance spectrum and durability. Moury Benoit, Charron Carine, Janzac Bérenger, Simon V., Gallois Jean-Luc, Palloix Alain, Caranta Carole. 2014. Infection, Genetics and Evolution, 27 : pp. 472-480.
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Expansion of banana (Musa acuminata) gene families involved in ethylene biosynthesis and signalling after lineage-specific whole-genome duplications. Jourda Cyril, Cardi Céline, Mbéguié-A-Mbéguié Didier, Bocs Stéphanie, Garsmeur Olivier, D'Hont Angélique, Yahiaoui Nabila. 2014. New Phytologist, 202 (3) : pp. 986-1000.
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First Report of 'Candidatus Liberibacter asiaticus' associated with Huanglongbing on Citrus latifolia in Martinique and Guadeloupe,French West Indies. Cellier Gilles, Moreau A., Cassam Nathalie, Hostachy Bruno, Ryckewaert Philippe, Aurela L., Picard R., Lombion Ketty, Rioualec Anne-Laure. 2014. Plant Disease, 98 (5) : p. 683.
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Genome wide profiling of Azospirillum lipoferum 4B gene expression during interaction with rice roots. Drogue Benoit, Sanguin Hervé, Borland Stéphanie, Prigent-Combaret Claire, Wisniewski-Dyé Florence. 2014. FEMS Microbiology, Ecology, 87 (2) : pp. 543-555.
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Global strategy for the conservation and use of coconut genetic resources 2014-2023: A draft summary. Johnson Vincent, Bourdeix Roland. 2014. Montpellier : COGENT, 31 p.
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Impact of recurrent gene duplication on adaptation of plant genomes. Fischer Iris, Dainat Jacques, Ranwez Vincent, Glemin Sylvain, Dufayard Jean-François, Chantret Nathalie. 2014. BMC Plant Biology, 14 (151), 15 p.
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Molecular characterization of yam virus X, a new potexvirus infecting yams (Dioscorea spp) and evidence for the existence of at least three distinct potexviruses infecting yams. Acina Manbole Isabelle Nina, Bonheur Lydiane, Svanella-Dumas Laurence, Filloux Denis, Gomez Rose-Marie, Faure Chantal, Lange David, Anzala Fabiola, Pavis Claudie, Marais Armelle, Roumagnac Philippe, Candresse Thierry, Teycheney Pierre-Yves. 2014. Archives of Virology, 159 (12) : pp. 3421-3426.
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Placental genome and maternal-placental genetic interactions: A genome-wide and candidate gene association study of placental abruption. Denis Marie, Salazar M., Williams M.A., Enquobahrie Daniel A., Tadesse Mahlet G., Sanchez Sixto E., Ananth Cande V.. 2014. PloS One, 9 (12):e116346, 24 p.
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Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication. Wu Guohong Albert, Prochnik Simon, Jenkins Jerry, Salse Jérôme, Hellsten Uffe, Murat Florent, Perrier Xavier, Ruiz Manuel, Scalabrin Simone, Terol Javier F., Takita Marco Aurélio, Labadie Karine, Poulain Julie, Couloux Arnaud, Jabbari Kamel, Cattonaro Frederica, Del Fabbro Cristian, Pinosio Sara, Zuccolo Andrea, Chapman Jarrod, Grimwood Jane, Tadeo Francisco, Estornell Leandro H., Muñoz-Sanz Juan V., Ibáñez Victoria, Herrero-Ortega Amparo, Aleza Pablo, Pérez-Pérez Júlian, Ramón Daniel, Brunel Dominique, Luro François, Chen Chunxian, Farmerie William G., Desany Brian, Kodira Chinnappa, Mohiuddin Mohammed, Harkins Tim, Fredrikson Karin, Burns Paul, Lomsadze Alexandre, Borodovsky Mark, Reforgiato Giuseppe, Freitas-Astúa Juliana, Quetier Francis, Navarro Luis, Roose Mikeal L., Wincker Patrick, Schmutz Jeremy, Morgante Michele, Machado Marcos Antonio, Talon Manuel, Ollitrault Patrick, Gmitter Frederick G. Jr., Rokhsar Daniel S.. 2014. Nature Biotechnology, 32 : pp. 656-662.
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Transcriptome population genomics reveals severe bottleneck and domestication cost in the African rice (Oryza glaberrima). Nabholz Benoit, Sarah Gautier, Sabot François, Ruiz Manuel, Adam Hélène, Nidelet Sabine, Ghesquière Alain, Santoni Sylvain, David Jacques, Glemin Sylvain. 2014. Molecular Ecology, 23 (9) : pp. 2210-2227.
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The coffee genome provides insight into the convergent evolution of caffeine biosynthesis. Denoeud France, Carretero-Paulet Lorenzo, Dereeper Alexis, Droc Gaëtan, Guyot Romain, Pietrella Marco, Chunfang Zheng, Alberti Adriana, Anthony François, Aprea Giuseppe, Aury Jean-Marc, Bento Pascal, Bernard Maria, Bocs Stéphanie, Campa Claudine, Cenci Alberto, Combes Marie-Christine, Crouzillat Dominique, Da Silva Corinne, Daddiego Loretta, De Bellis Fabien, Dussert Stéphane, Garsmeur Olivier, Gayraud Thomas, Guignon Valentin, Jahn Katharina, Jamilloux Véronique, Joët Thierry, Labadie Karine, Tianying Lan, Leclercq Julie, Lepelley Maud, Leroy Thierry, Lei-Ting Li, Librado Pablo, Lopez Loredana, Muñoz Adriana, Noël Benjamin, Pallavicini Alberto, Perrotta Gaetano, Poncet Valérie, Pot David, Priyono, Rigoreau Michel, Rouard Mathieu, Rozas Julio, Tranchant-Dubreuil Christine, VanBuren Robert, Qiong Zhang, Andrade Alan A., Argout Xavier, Bertrand Benoît, De Kochko Alexandre, Graziosi Giorgio, Henry Robert, Jayarama, Ming Ray, Nagai Chifumi, Rounsley Steve, Sankoff David, Giuliano Giovanni, Albert Victor A., Wincker Patrick, Lashermes Philippe. 2014. Science, 345 (6201) : pp. 1181-1184.
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The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding plastome evolution in the legume family. Martin Guillaume, Rousseau-Gueutin Mathieu, Cordonnier Solenn, Lima Oscar, Michon-Coudouel Sophie, Naquin Delphine, de Carvalho Julie Ferreira, Ainouche Malika Lily, Salmon Armel, Ainouche Abdelkader. 2014. Annals of Botany, 113 (7) : pp. 1197-1210.
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The genomic substrate for adaptive radiation in African cichlid fish. Brawand David, Wagner Catherine E., Li Yang I., Malinsky Milan, Keller Irène, Fan Shaohua, Simakov Oleg, Ng Alvin Y., Lim Zhi Wei, Bezault Etienne, Turner-Maier Jason, Johnson Jeremy, Alcazar Rosa, Noh Hyun Ji, Russell Pamela, Aken Bronwen, Alföldi Jessica, Amemiya Chris, Azzouzi Naoual, Baroiller Jean-François, Barloy-Hubler Frédérique, Berlin Aaron, Bloomquist Ryan, Carleton Karen L., Conte Matthew A., D'Cotta Helena, Eshel Orly, Gaffney Leslie, Galibert Francis, Gante Hugo F., Gnerre Sante, Greuter Lucie, Guyon Richard, Haddad Nathalie S., Haerty Wilfried, Harris Rayna M., Hofmann Hans A., Hourlier Thibaut, Hulata Gideon, Jaffe David B., Lara Marcia, Lee Alison P., MacCallum Iain, Mwaiko Salome, Nikaido Masato, Nishihara Hidenori, Ozouf-Costaz Catherine, Penman David J., Przybylski Darius, Rakotomanga Michelle, Renn Suzy C. P., Ribeiro Filipe J., Ron Micha, Salzburger Walter, Sanchez-Pulido Luis, Santos Emilia, Searle Steve, Sharpe Ted, Swofford Ross, Tan Frederick J., Williams Louise, Young Sarah, Yin Shuangye, Okada Norihiro, Kocher Thomas D., Miska Eric A., Lander Eric S., Venkatesh Byrappa, Fernald Russell D., Meyer Axel, Ponting Chris P., Streelman J. Todd, Lindblad-Toh Kerstin, Seehausen Ole, Di Palma Frederica. 2014. Nature, 513 (7518) : pp. 375-381.
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The prevalence of badnaviruses in West African yams (Dioscorea cayenensis-rotundata) and evidence of endogenous pararetrovirus sequences in their genomes. Seal Susan, Turaki Aliyu, Muller Emmanuelle, Lava Kumar P., Kenyon Lawrence, Filloux Denis, Galzi Serge, Lopez-Montes Antonio, Iskra Caruana Marie-Line. 2014. Virus Research, 186 : pp. 144-145. International Plant Virus Epidemiology Symposium. 12, Arusha, Tanzanie, 28 January 2013/1 February 2013.
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The streamlined genome of Phytomonas spp. relative to human pathogenic kinetoplastids reveals a parasite tailored for plants. Porcel Betina M., Denoeud France, Opperdoes Fred, Noël Benjamin, Madoui Mohammed-Amine, Hammarton Tansy, Field Mark, Da Silva Corinne, Couloux Arnaud, Poulain Julie, Katinka Michael, Jabbari Kamel, Aury Jean-Marc, Campbell David A., Cintron Roxana, Dickens Nicolas, Docampo Roberto, Sturm Nancy R., Koumandou Lila, Fabre Sandrine, Flegontov Pavel, Lukes Julius, Michaeli Shula, Mottram Jeremy, Szoor Balazs, Zilberstein Dan, Bringaud Frédéric, Wincker Patrick, Dollet Michel. 2014. PLoS Genetics, 10 (2):e1004007, 24 p.
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2013

BAC-end sequences analysis provides first insights into coffee (Coffea canephora P.) genome composition and evolution. Dereeper Alexis, Guyot Romain, Tranchant-Dubreuil Christine, Anthony François, Argout Xavier, De Bellis Fabien, Combes Marie-Christine, Gavory Fréderick, De Kochko Alexandre, Kudrna Dave, Leroy Thierry, Poulain Julie, Rondeau Myriam, Song Xiang, Wing Rod A., Lashermes Philippe. 2013. Plant Molecular Biology, 83 (3) : pp. 177-189.
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Draft genome sequence of the Xanthomonas cassavae type strain CFBP 4642. Bolot Stéphanie, Munoz Bodnar Alejandra, Cunnac Sébastien, Ortiz Erika, Szurek Boris, Noel Laurent D., Arlat Mathieu, Jacques Marie Agnès, Gagnevin Lionel, Portier Perrine, Fischer-Le Saux Marion, Carrère Sébastien, Koebnik Ralf. 2013. Genome Announcements, 1 (4):e00679, 13 p.
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Draft genome sequences of Mycoplasma auris, Mycoplasma arginini, and Mycoplasma yeatsii, two species of the ear canal of Caprinae. Dordet-Frisoni Emilie, Baranowski Eric, Barré Aurélien, Blanchard Alain, Breton Marc, Couture Carole, Dupuy Virginie, Gaurivaud Patrice, Jacob Daniel, Lemaitre Claire, Manso-Silvan Lucia, Nikolski Macha, Nouvel Laurent Xavier, Poumarat François, Sirand-Pugnet Pascal, Thebault Patricia, Theil Sébastien, Thiaucourt François, Citti Christine, Tardy Florence. 2013. Genome Announcements, 1 (3) : 00280-13.
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Evidence for novel hepaciviruses in rodents. Drexler Jan Felix, Corman Victor Max, Müller Marcel Alexander, Lukashev Alexander N., Gmyl Anatoly, Coutard Bruno, Adam Alexander, Ritz Daniel, Leijten Lonneke M., Van Riel Debby, Kallies Rene, Klose Stefan M., Gloza-Rausch Florian, Binger Tabea, Annan Augustina, Adu-Sarkodie Yaw, Oppong Samuel, Bourgarel Mathieu, Rupp Daniel, Hoffmann Bernd, Schlegel Mathias, Kümmerer Beate M., Krüger Detlev H., Schmidt-chanasit Jonas, Aguilar Setién Alvaro, Cottontail Veronika M., Hemachudha Thiravat, Wacharapluesadee Supaporn, Osterrieder Klaus, Bartenschlager Ralf, Matthee Sonja, Beer Martin, Kuilen Thijs, Reusken Chantal, Leroy Eric M., Ulrich Rainer G., Drosten Christian. 2013. PLoS Pathogens, 9 (6):e1003438, 17 p.
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Gene copy number is differentially regulated in a multipartite virus. Sicard Anne, Yvon Michel, Timchenko Tatiana, Gronenborn Bruno, Michalakis Yannis, Gutierrez Serafin, Blanc Stéphane. 2013. Nature Communications, 4:2248, 8 p.
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Genome mining reveals the genus Xanthomonas to be a promising reservoir for new bioactive non-ribosomally synthesized peptides. Royer Monique, Koebnik Ralf, Marguerettaz Mélanie, Barbe Valérie, Robin Guillaume P., Brin Christelle, Carrère Sébastien, Gomez Camila, Hügelland Manuela, Völler Ginka H., Noëll Julie, Pieretti Isabelle, Rausch Saskia, Verdier Valérie, Poussier Stéphane, Rott Philippe, Süssmuth Roderich, Cociancich Stéphane. 2013. BMC Genomics, 14 (658), 19 p.
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Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads. Darrasse Armelle, Carrère Sébastien, Barbe Valérie, Boureau Tristan, Arrieta-Ortiz Mario L., Bonneau Sophie, Briand Martial, Brin Christelle, Cociancich Stéphane, Durand Karine, Fouteau Stéphanie, Gagnevin Lionel, Guérin Fabien, Guy Endrick, Indiana Arnaud, Koebnik Ralf, Lauber Emmanuelle, Munoz Alejandra, Noel Laurent D., Pieretti Isabelle, Poussier Stéphane, Pruvost Olivier, Robène-Soustrade Isabelle, Rott Philippe, Royer Monique, Serres-Giardi Laurana, Szurek Boris, Van Sluys Marie-Anne, Verdier Valérie, Vernière Christian, Arlat Mathieu, Manceau Charles, Jacques Marie Agnès. 2013. BMC Genomics, 14 (761), 30 p.
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Genome-wide association mapping of root traits in a japonica rice panel. Courtois Brigitte, Audebert Alain, Dardou Audrey, Roques Sandrine, Ghneim Thaura, Droc Gaëtan, Frouin Julien, Rouan Lauriane, Gozé Eric, Kilian Andrzej, Ahmadi Nourollah, Dingkuhn Michaël. 2013. PloS One, 8 (11):e78037, 18 p.
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Genomic survey of pathogenicity determinants and VNTR markers in the cassava bacterial pathogen Xanthomonas axonopodis pv. manihotis strain CIO151. Arrieta-Ortiz Mario L., Rodríguez-R Luis Miguel, Pérez-Quintero Alvaro L., Poulin Lucie, Díaz Ana C., Arias Rojas Nathalia, Trujillo Cesar, Restrepo Benavides Mariana, Bart Rebecca, Boch Jen, Boureau Tristan, Darrasse Armelle, David Perrine, Dugé de Bernonville Thomas, Fontanilla Paula, Gagnevin Lionel, Guérin Fabien, Jacques Marie Agnès, Lauber Emmanuelle, Lefeuvre Pierre, Medina Cesar, Medina Edgar, Montenegro Nathaly, Munoz Alejandra, Noel Laurent D., Ortiz Quiñoes Juan F., Osorio Daniela, Pardo Carolina, Patil Prabhu B., Poussier Stéphane, Pruvost Olivier, Robène-Soustrade Isabelle, Ryan Robert P., Tabima Javier, Urrego Morales Osacar G., Vernière Christian, Carrère Sébastien, Verdier Valérie, Szurek Boris, Restrepo Silvia, López Camilo, Koebnik Ralf, Bernal Adriana. 2013. PloS One, 8 (11):e79704, 18 p.
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High-Quality Draft Genome Sequences of Two Xanthomonas citri pv. malvacearum Strains. Cunnac Sébastien, Bolot Stéphanie, Forero Serna Natalia, Ortiz Erika, Szurek Boris, Noel Laurent D., Arlat Mathieu, Jacques Marie Agnès, Gagnevin Lionel, Carrère Sébastien, Nicole Michel, Koebnik Ralf. 2013. Genome Announcements, 1 (4):e00674, 2 p.
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High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination. Chancerel Emilie, Lamy Jean-Baptiste, Lesur Isabelle, Noirot Céline, Klopp Christophe, Ehrenmann François, Boury Christophe, Le Provost Grégoire, Label Philippe, Lalanne Céline, Léger Valérie, Salin Franck, Gion Jean-Marc, Plomion Christophe. 2013. BMC Biology, 11 (50), 19 p.
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Identification and characterisation of a highly divergent geminivirus: Evolutionary and taxonomic implications. Bernardo Pauline, Golden Michael, Akram Mohammad, Naimuddin, Nadarajan Nagaswamy, Fernandez Emmanuel, Granier Martine, Rebelo Anthony, Peterschmitt Michel, Martin Darren Patrick, Roumagnac Philippe. 2013. Virus Research, 177 (1) : pp. 35-45.
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Identification of the Hevea brasiliensis AP2/ERF superfamily by RNA sequencing. Duan Cuifang, Argout Xavier, Gebelin Virginie, Summo Marilyne, Dufayard Jean-François, Leclercq Julie, Kuswanhadi, Piyatrakul Piyanuch, Pirrello Julien, Rio Maryannick, Champion Anthony, Montoro Pascal. 2013. BMC Genomics, 14 (30), 22 p.
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Mutant resources for functional analysis of the rice genome. Droc Gaëtan, An Gynheung, Wu Changyin, Hsing Yue-ie C., Hirochika Hirohiko, Pereira Andy, Sundaresan Venkatesan, Han Chang-deok, Upadhyaya Narayana, Ramachandran Srinivasan, Comai Luca, Leung Hei, Guiderdoni Emmanuel. 2013. In : Genetics and genomics of rice. Zhang Qifa (ed.), Wing Rod (ed.). New York : Springer [Etats-Unis], pp. 81-115. (Plant Genetics and Genomics: Crops and Models, 5) ISBN 978-1-4614-7902-4
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The RpfCG two-component system negatively regulates the colonization of sugar cane stalks by Xanthomonas albilineans. Rott Philippe, Fleites Laura, Mensi Imène, Sheppard L.J., Daugrois Jean-Heinrich, Dow J. Maxwell, Gabriel Dean W.. 2013. Microbiology, 159 (6) : pp. 1149-1159.
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Three infectious viral species lying in wait in the banana genome. Chabannes Matthieu, Baurens Franc-Christophe, Duroy Pierre-Olivier, Bocs Stéphanie, Vernerey Marie-Stéphanie, Rodier-Goud Marguerite, Barbe Valérie, Gayral Philippe, Iskra Caruana Marie-Line. 2013. Journal of Virology, 87 (15) : pp. 8624-8637.
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Transcriptional activity, chromosomal distribution and expression effects of transposable elements in Coffea genomes. Lopes Fabrício R., Jjingo Daudi, Da Silva Carlos R.M., Andrade Alan Carvalho, Marraccini Pierre, Teixeira João B., Carazzolle Marcelo Falsarella, Pereira Gonçalo Amarante Guimarães, Pereira Luiz Filipe P., Vanzela André L.L., Wang Lu, Jordan King, Carareto Claudia M.A.. 2013. PloS One, 8 (11):e78931, 16 p.
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Variétés et porte-greffes : création, description et sélection. Jacquemond Camille, Curk Franck, Froelicher Yann, Luro François. 2013. In : Les clémentiniers et autres petits agrumes. Jacquemond Camille (ed.), Curk Franck (ed.), Heuezt Marion (ed.). Versailles : Ed. Quae, pp. 37-107. (Savoir-faire) ISBN 978-2-7592-2067-0
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The banana genome hub. Droc Gaëtan, Larivière Delphine, Guignon Valentin, Yahiaoui Nabila, This Dominique, Garsmeur Olivier, Dereeper Alexis, Hamelin Chantal, Argout Xavier, Dufayard Jean-François, Lengellé Juliette, Baurens Franc-Christophe, Cenci Alberto, Pitollat Bertrand, D'Hont Angélique, Ruiz Manuel, Rouard Mathieu, Bocs Stéphanie. 2013. Database, 2013 (bat035), 14 p.
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The complete chloroplast genome of banana (Musa acuminata, Zingiberales): Insight into plastid monocotyledon evolution. Martin Guillaume, Baurens Franc-Christophe, Cardi Céline, Aury Jean-Marc, D'Hont Angélique. 2013. PloS One, 8 (6):e67350, 10 p.
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An initial assessment of linkage disequilibrium (LD) in coffee trees: LD patterns in groups of Coffea canephora Pierre using microsatellite analysis. Cubry Philippe, De Bellis Fabien, Avia Komlan, Bouchet Sophie, Pot David, Dufour Magali, Legnaté Hyacinthe, Leroy Thierry. 2013. BMC Genomics, 14 (10), 15 p.
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2012

4th Xanthomonas genomics conference, Angers, France, july 9-12, 2012 : Book of abstracts. Manceau Charles (ed.), Jacques Marie Agnès (ed.), Arlat Mathieu (ed.), Lauber Emmanuelle (ed.), Noel Laurent D. (ed.), Gagnevin Lionel (ed.), Pruvost Olivier (ed.), Rott Philippe (ed.), Royer Monique (ed.), Koebnik Ralf (ed.), Verdier Valérie (ed.). 2012. Paris : INRA, 85 p. Xanthomonas genomics conference 2012. 4, Angers, France, 9 July 2012/12 July 2012.
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Analysis of the Meiotic Segregation in Intergeneric Hybrids of Tilapias. Bezault Etienne, Rognon François, Clota Frédéric, Gharbi Karim, Baroiller Jean-François, Chevassus Bernard. 2012. International Journal of Evolutionary Biology, 2012 (ID 817562), 10 p.
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Ancestral synteny shared between distantly-related plant species from the asterid (Coffea canephora and Solanum Sp.) and rosid (Vitis vinifera) clades. Guyot Romain, Lefebvre-Pautigny Florent, Tranchant-Dubreuil Christine, Rigoreau Michel, Hamon Perla, Leroy Thierry, Hamon Serge, Poncet Julie, Crouzillat Dominique, De Kochko Alexandre. 2012. BMC Genomics, 13 (103), 14 p.
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Chado Controller : Advanced annotation management with a community annotation system. Guignon Valentin, Droc Gaëtan, Alaux Michael, Baurens Franc-Christophe, Garsmeur Olivier, Poiron Claire, Carver Timothy L.W., Rouard Mathieu, Bocs Stéphanie. 2012. Bioinformatics, 28 (7) : pp. 1054-1056.
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Dossier de candidature au diplôme d'habilitation à diriger des recherches. Perin Christophe. 2012. Montpellier : UM2, 61 p. Habilitation à diriger des recherches : Université Montpellier 2
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Genome analysis of Rift Valley Fever virus, Mayotte. Cetre-Sossah Catherine, Zeller Hervé, Grandadam Marc, Caro Valérie, Bouloy Michèle, Cardinale Eric, Albina Emmanuel. 2012. Emerging Infectious Diseases, 18 (6) : pp. 969-971.
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Genomic insights into strategies used by Xanthomonas albilineans with its reduced artillery to spread within sugarcane xylem vessels. Pieretti Isabelle, Royer Monique, Barbe Valérie, Carrère Sébastien, Koebnik Ralf, Couloux Arnaud, Darrasse Armelle, Gouzy Jérôme, Jacques Marie Agnès, Lauber Emmanuelle, Manceau Charles, Mangenot Sophie, Poussier Stéphane, Segurens Béatrice, Szurek Boris, Verdier Valérie, Arlat Mathieu, Gabriel Dean W., Rott Philippe, Cociancich Stéphane. 2012. BMC Genomics, 13 (658), 23 p.
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Global gene expression profiling of Ehrlichia ruminantium at different stages of development. Pruneau Ludovic, Emboule Loïc, Gely Pryscellia, Marcelino Isabel, Mari Bernard, Pinarello Valérie, Sheikboudou Christian, Martinez Dominique, Daigle France, Lefrançois Thierry, Meyer Damien, Vachiery Nathalie. 2012. FEMS Immunology and Medical Microbiology, 64 (1) : pp. 66-73.
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Long microsatellites and unusually high levels of genetic diversity in the Orthoptera. Chapuis Marie Pierre, Streiff Réjane, Sword Gregory A.. 2012. Insect Molecular Biology, 21 (2) : pp. 181-186.
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Matita, a new retroelement from peanut : Characterization and evolutionary context in the light of the Arachis A-B genome divergence. Nielen Stephan, Vidigal Bruna S., Leal-Bertioli Soraya C.M., Ratnaparkhe Milind B., Paterson Andrew H., Garsmeur Olivier, D'Hont Angélique, Guimarães Patricia M., Bertioli David J.. 2012. Molecular Genetics and Genomics, 287 (1) : pp. 21-38.
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Mitochondrial genomes reveal the global phylogeography and dispersal routes of the migratory locust. Ma Chuan, Yang Pengcheng, Jiang Feng, Chapuis Marie Pierre, Shali Yasen, Sword Gregory A., Kang Le. 2012. Molecular Ecology, 21 (17) : pp. 4344-4358.
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Mutator system derivatives isolated from sugarcane genome sequence. Manetti M.E., Rossi Magdalena, Cruz Guilherme Marcelo Queiroga, Saccaro N.L., Nakabashi M., Altebarmakian V., Rodier-Goud Marguerite, Domingues Douglas S., D'Hont Angélique, Van Sluys Marie-Anne. 2012. Tropical Plant Biology, 5 (3) : pp. 233-243.
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Quels sont les enjeux au cours de l'évolution du bananier qui ont conduit au maintien de séquences virales de Banana streak virus dans son génome ? Duroy Pierre-Olivier. 2012. Montpellier : UM2, 213 p. Thèse de doctorat : Systèmes intégrés en biologie, agronomie, géosciences, hydrosciences et environnement (SIBAGHE). Biologie intégrative des plantes : Université Montpellier 2
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Role of bioinformatics as a tool. Rouard Mathieu, Carpentier Sébastien Christian, Bocs Stéphanie, Droc Gaëtan, Argout Xavier, Roux Nicolas, Ruiz Manuel. 2012. In : Genetics, genomics and breeding of bananas. Pillay Michael (ed.), Ude George (ed.), Kole Chittaranjan (ed.). Enfield : Science Publishers, pp. 194-216. (Genetics, genomics and breeding of crop plants) ISBN 978-1-57808-788-4
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The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. D'Hont Angélique, Denoeud France, Aury Jean-Marc, Baurens Franc-Christophe, Carreel Françoise, Garsmeur Olivier, Noël Benjamin, Bocs Stéphanie, Droc Gaëtan, Rouard Mathieu, Da Silva Corinne, Jabbari Kamel, Cardi Céline, Poulain Julie, Souquet Marlène, Labadie Karine, Jourda Cyril, Lengellé Juliette, Rodier-Goud Marguerite, Alberti Adriana, Bernard Maria, Correa Margot, Ayyampalayam Saravanaraj, Mckain Michael R, Leebens-Mack Jim, Burgess Diane, Freeling Mike, Mbéguié-A-Mbéguié Didier, Chabannes Matthieu, Wicker Thomas, Panaud Olivier, Barbosa Jose, Hribova Eva, Heslop Harrison Pat, Habas Rémy, Rivallan Ronan, François Philippe, Poiron Claire, Kilian Andrzej, Burthia Dheema, Jenny Christophe, Bakry Frédéric, Brown Spencer, Guignon Valentin, Kema Gert H.J., Dita Miguel A., Waalwijk Cees, Joseph Steeve, Dievart Anne, Jaillon Olivier, Leclercq Julie, Argout Xavier, Lyons Eric, Almeida Ana, Jeridi Mouna, Dolezel Jaroslav, Roux Nicolas, Risterucci Ange-Marie, Weissenbach Jean, Ruiz Manuel, Glaszmann Jean-Christophe, Quetier Francis, Yahiaoui Nabila, Wincker Patrick. 2012. Nature, 488 (7410) : pp. 213-217.
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A high-resolution map of the Nile tilapia genome: A resource for studying cichlids and other percomorphs. Guyon Richard, Rakotomanga Michelle, Azzouzi Naoual, Coutanceau Jean-Pierre, Bonillo Céline, D'Cotta Helena, Pepey Elodie, Soler Lucile, Rodier-Goud Marguerite, D'Hont Angélique, Conte Matthieu, Van Bers Nikkie, Penman David J., Hitte Christophe, Crooijmans Richard, Kocher Thomas D., Ozouf-Costaz Catherine, Baroiller Jean-François, Galibert Francis. 2012. BMC Genomics, 13 (222), 17 p.
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A novel cassava-infecting begomovirus from Madagascar: cassava mosaic Madagascar virus. Harimalala Mireille Aurélie, Lefeuvre Pierre, De Bruyn Alexandre, Tiendrebeogo Fidèle, Hoareau Murielle, Villemot Julie, Ranomenjanahary Sahondramalala, Andrianjaka Alice, Reynaud Bernard, Lett Jean-Michel. 2012. Archives of Virology, 157 (10) : pp. 2027-2030.
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A novel maize-infecting mastrevirus from La Réunion Island. Pande Daniel, Kraberger Simona, Lefeuvre Pierre, Lett Jean-Michel, Shepherd Dionne Natalie, Varsani Arvind, Martin Darren Patrick. 2012. Archives of Virology, 157 (8) : pp. 1617-1621.
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2011

Complete genome sequence of a dahlia common mosaic virus isolate from New Zealand. Hadfield James, Linderme Daphné, Shepherd Dionne Natalie, Bezuidenhout Marion, Lefeuvre Pierre, Martin Darren Patrick, Varsani Arvind. 2011. Archives of Virology, 156 (12) : pp. 2297-2301.
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Endogenous viral sequences in plant genomes. Teycheney Pierre-Yves, Geering Andrew D.. 2011. In : Recent advances in plant virology. Caranta Carole (ed.), Aranda Miguel A. (ed.), Tepfer Mark (ed.), Lopez-Moya Juan José (ed.). Norfolk : Caister Academic Press, pp. 343-362. ISBN 978-1-904455-75-2
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Etudes d'associations pan-génomiques chez la canne à sucre (Saccharum spp.) : Analyse de la résistance à l'échaudure des feuilles (Xanthomonas albilineans) et à la maladie de la feuille jaune (Sugarcane Yellow Leaf Virus). Rocher Solen. 2011. Montpellier : UM2, 120 p. Thèse de doctorat : Systèmes intégrés en biologie, agronomie, géosciences, hydrosciences, environnement (SIBAGHE). Biochimie et biologie moléculaire : Université Montpellier 2
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GNPAnnot community annotation system applied to sugarcane bac clone sequences (W572). Guignon Valentin, Droc Gaëtan, Garsmeur Olivier, Charron Carine, D'Hont Angélique, Bocs Stéphanie. 2011. In : Abstracts of Plant and Animal Genomes XIXth Conference, San Diego, CA (USA), January 15-19, 2011. s.l. : s.n., Résumé Plant and Animal Genomes Conference. 19, San Diego, États-Unis, 15 January 2011/19 January 2011.
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Genetic diversity and population structure of the secondary symbiont of tsetse flies, sodalis glossinidius, in sleeping sickness foci in Cameroon. Farikou Oumarou, Thevenon Sophie, Njiokou Flobert, Allal François, Cuny Gérard, Geiger Anne. 2011. PLoS Neglected Tropical Diseases, 5 (8):e1281, 9 p.
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High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane. Garsmeur Olivier, Charron Carine, Bocs Stéphanie, Jouffe Vincent, Samain Sylvie, Couloux Arnaud, Droc Gaëtan, Zini Cyrille, Glaszmann Jean-Christophe, Van Sluys Marie-Anne, D'Hont Angélique. 2011. New Phytologist, 189 (2) : pp. 629-642.
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Hétérois et variétés hybrides chez un Allotetraploïde pérenne (Coffea arabica). Bertrand Benoît. 2011. Montpellier : UM2, 73 p. Habilitation à diriger des recherches : Université Montpellier 2
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Leucine-Rich repeat receptor kinases are sporadically distributed in eukaryotic genomes. Dievart Anne, Gilbert Nicolas, Droc Gaëtan, Attard Agnès, Gourgues Mathieu, Guiderdoni Emmanuel, Perin Christophe. 2011. BMC Evolutionary Biology, 11 (367), 9 p.
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Sequencing the coffee genome (W152). Wincker Patrick, Albert Victor A., Andrade Alan A., Argout Xavier, Bertrand Benoît, De Kochko Alexandre, Giuliano Giovanni, Graziosi Giorgio, Henry Robert, Jayarama Jayarama, Lashermes Philippe, Ming Ray, Nagai Chifumi, Rounsley Steve, Sankoff David. 2011. In : Abstracts of Plant and Animal Genomes XIXth Conference, San Diego, CA (USA), January 15-19, 2011. s.l. : s.n., Résumé Plant and Animal Genomes Conference. 19, San Diego, États-Unis, 15 January 2011/19 January 2011.
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Two new complete genome sequences offer Insight into host and tissue specificity of plant Pathogenic Xanthomonas spp. Bogdanove Adam J., Koebnik Ralf, Lu Hong, Furutani Ayako, Angiuoli Samuel V., Patil Prabhu B., Van Sluys Marie-Anne, Ryan Robert P., Meyer Damien, Han Sang-Wook, Aparna Gudlur, Rajaram Misha, Delcher Arthur L., Phillippy Adam M., Puiu Daniela, Schatz Michael C., Shumway Martin, Sommer Daniel D., Trapnell Cole, Benahmed Faiza, Dimitrov George, Madupu Ramana, Radune Diana, Sullivan Steven, Jha Gopaljee, Ishihara Hiromichi, Lee Sang-Won, Pandey Alok, Sharma Vikas, Sriariyanun Malinee, Szurek Boris, Vera-Cruz Casiana M., Dorman Karin S., Ronald Pamela C., Verdier Valérie, Dow J. Maxwell, Sonti Ramesh V., Tsuge Seiji, Brendel Volker P., Rabinowicz Pablo D., Leach Jan E., White Frank F., Salzberg Steven L.. 2011. Journal of Bacteriology, 193 (19) : pp. 5450-5464.
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The coupling hypothesis: why genome scans may fail to map local adaptation genes. Bierne Nicolas, Welch John, Loire Etienne, Bonhomme François, David Patrice. 2011. Molecular Ecology, 20 (10) : pp. 2044-2072.
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The sugarcane genome challenge: Strategies for sequencing a highly complex genome. Mendes Souza Glaucia, Berges Hélène, Bocs Stéphanie, Casu Rosanne, D'Hont Angélique, Ferreira João Eduardo, Henry Robert, Ming Ray, Potier Bernard, Van Sluys Marie-Anne, Vincentz Michel, Paterson Andrew H.. 2011. Tropical Plant Biology, 3 (3-4) : pp. 145-156.
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2010

Brachypodium distachyon as a model system for studying genes involved in cell wall synthesis. Bouchabke-Coussa Oumaya, Bouvier d'Ivoire Madeleine, Darracq Olivier, Antelme Sébastien, Sibout Richard, Jouanin Lise, Pollet Brigitte, Lapierre Catherine, Dalmais Marion, Pannetier Catherine, Chupeau Yves. 2010. In Vitro Cellular and Developmental Biology. Animal, 46, suppl.1 : S201-S201. IAPB Congress 2010. 12, Saint-Louis, États-Unis, 6 June 2010/11 June 2010.
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Chado Controller a database monitor for confidentiality, quality and tracking of genomic annotations. Guignon Valentin, Droc Gaëtan, Poiron Claire, Lengellé Juliette, Garsmeur Olivier, Baurens Franc-Christophe, Bocs Stéphanie. 2010. In : Journées ouvertes biologie informatique mathématique (JOBIM), Montpellier, France, 07-09 septembre 2010. s.l. : s.n., Résumé, 1 p. Journées ouvertes biologie informatique mathématique, Montpellier, France, 7 September 2010/9 September 2010.
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Comparative physical maps derived from BAC end sequences of tilapia (Oreochromis niloticus). Soler Lucile, Conte Matthew A., Katagiri Takayuki, Howe Aimée E., Lee Bo-Young, Amemiya Chris, Stuart Andrew, Dossat Carole, Poulain Julie, Johnson Jeremy, Di Palma Frederica, Lindblad-Toh Kerstin, Baroiller Jean-François, D'Cotta Helena, Ozouf-Costaz Catherine, Kocher Thomas D.. 2010. BMC Genomics, 11 (636), 8 p.
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An EST resource for tilapia based on 17 normalized libraries and assembly of 116,899 sequence tags. Lee Bo-Young, Howe Aimée E., Conte Matthew A., D'Cotta Helena, Pepey Elodie, Baroiller Jean-François, Di Palma Frederica, Carleton Karen L., Kocher Thomas D.. 2010. BMC Genomics, 11:278, 10 p.
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Evolution of endogenous sequences of Banana Streak Virus: what can we learn from banana (Musa sp.) evolution? Gayral Philippe, Blondin Laurence, Guidolin Olivier, Carreel Françoise, Hippolyte Isabelle, Perrier Xavier, Iskra Caruana Marie-Line. 2010. Journal of Virology, 84 (14) : pp. 7346-7359.
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Mechanisms of haplotype divergence at the RGA08 nucleotide-binding leucine-rich repeat gene locus in wild banana (Musa balbisiana). Baurens Franc-Christophe, Bocs Stéphanie, Rouard Mathieu, Matsumoto Takashi, Miller Roberto Neil Gerard, Rodier-Goud Marguerite, Mbéguié-A-Mbéguié Didier, Yahiaoui Nabila. 2010. BMC Plant Biology, 10 (149), 16 p.
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Micropropagation by tissue culture triggers differential expression of infectious endogenous Banana streak virus sequences (eBSV) present in the B genome of natural and synthetic interspecific banana plantains. Côte François-Xavier, Galzi Serge, Folliot Michel, Lamagnère Yannick, Teycheney Pierre-Yves, Iskra Caruana Marie-Line. 2010. Molecular Plant Pathology, 11 (1) : pp. 137-144.
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Oil palm biotechnologies are definitely out of infancy. Rival Alain, Jaligot Estelle. 2010. OCL. Oléagineux Corps gras Lipides, 17 (6) : pp. 368-374.
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Variable number of tandem repeat markers in the genome sequence of Mycosphaerella fijiensis, the causal agent of black leaf streak disease of banana (Musa spp). Garcia S.A.L., Van der Lee Theo A.J., Ferreira Claudia Fortes, Te Lintel Hekkert B., Zapater Marie-Françoise, Goodwin Stephen B., Kema Gert H.J., Souza M.T.. 2010. Genetics and Molecular Research, 9 (4) : pp. 2207-2212.
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Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity. Morelli Giovanna, Song Yajun, Mazzoni Camila J., Eppinger Mark, Roumagnac Philippe, Wagner David.M., Feldkamp Mirjam, Kusecek Barica, Vogler Amy. J., Li Yanjun, Cui Yujun, Thomson Nicholas R, Jombart Thibaut, Leblois Raphaël, Lichtner Peter, Rahalison Lila, Petersen Jeannine M, Balloux François, Keim Paul, Wirth Thierry, Ravel Jacques, Yang Ruifu, Carniel Elisabeth, Achtman Mark. 2010. Nature Genetics, 42 (12) : pp. 1140-1143.
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The classification and nomenclature of endogenous viruses of the family Caulimoviridae. Geering Andrew D., Scharaschkin Tanya, Teycheney Pierre-Yves. 2010. Archives of Virology, 155 (1) : pp. 123-131.
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A four-partner plant-virus interaction: enemies can also come from within. Iskra Caruana Marie-Line, Baurens Franc-Christophe, Gayral Philippe, Chabannes Matthieu. 2010. Molecular Plant-Microbe Interactions, 23 (11) : pp. 1394-1402.
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A grapevine Shaker inward K+ channel activated by the calcineurin B-like calcium sensor 1-protein kinase CIPK23 network is expressed in grape berries under drought stress conditions. Cuellar Térésa, Pascaud François, Verdeil Jean-Luc, Torregrosa Laurent, Adam-Blondon Anne-Françoise, Thibaud Jean-Baptiste, Sentenac Hervé, Gaillard Isabelle. 2010. Plant Journal, 61 (1) : pp. 58-69.
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A high-throughput data mining of single nucleotide polymorphisms in Coffea species expressed sequence tags suggests differential homeologous gene expression in the allotetraploid Coffea arabica 1[W]. Vidal Ramon Oliveira, Mondego Jorge M.C., Pot David, Batista Ambrosio Alinne, Carvalho Andrade Alan, Protasio Pereira Luiz Filipe, Colombo Carlos Augusto, Vieira Luiz Gonzaga Esteves, Carazzolle Marcelo Falsarella, Guimarães Pereira Gonçalo Amarante. 2010. Plant Physiology, 154 (3) : pp. 1053-1066.
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A saturated SSR/DArT linkage map of Musa acuminata addressing genome rearrangements among bananas. Hippolyte Isabelle, Bakry Frédéric, Seguin Marc, Gardes Laëtitia, Rivallan Ronan, Risterucci Ange-Marie, Jenny Christophe, Perrier Xavier, Carreel Françoise, Argout Xavier, Piffanelli Pietro, Khan Imtiaz A., Miller Roberto Neil Gerard, Pappas Junior Georgios, Mbéguié-A-Mbéguié Didier, Matsumoto Takashi, De Bernardinis Véronique, Huttner Eric, Kilian Andrzej, Baurens Franc-Christophe, D'Hont Angélique, Côte François-Xavier, Courtois Brigitte, Glaszmann Jean-Christophe. 2010. BMC Plant Biology, 10 (65), 18 p.
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2009

Histoire évolutive d'intégrations virales infectieuses chez les bananiers M. balbisiana. Gayral Philippe, Guidolin Olivier, Blondin Laurence, Hippolyte Isabelle, Perrier Xavier, Iskra Caruana Marie-Line. 2009. In : 12èmes Rencontres de virologie végétale, Aussois du 18 au 22 janvier 2009. Brault Véronique (ed.), Ziegler-Graff Véronique (ed.), Revers Frédéric (ed.). SFP. Paris : CNRS, Résumé, p. 4. Rencontres de virologie végétale. 12, Aussois, France, 18 January 2009/22 January 2009.
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How to control and prevent the spread of banana streak disease when the origin could be viral sequences integrated in banana genome? Iskra Caruana Marie-Line, Gayral Philippe, Galzi Serge, Laboureau Nathalie. 2009. In : Proceedings of the international symposium on recent advances in banana crop protection for sustainable production and improved livelihoods, White River, South Africa, September 10-14, 2007. Jones David R. (ed.), Van den Bergh Inge (ed.). ISHS. Louvain : ISHS [Belgique], pp. 77-84. (Acta Horticulturae, 828) ISBN 978-90-6605-488-2 International Symposium on recent advances in banana crop protection for sustainable production and improved livelihoods. 1, White River, Afrique du Sud, 10 September 2007/14 September 2007.
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OryGenesDB 2008 update: Database interoperability for functional genomics of rice. Droc Gaëtan, Perin Christophe, Fromentin Sébastien, Larmande Pierre. 2009. Nucleic Acids Research, 37, suppl. 1, D992-D995
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Plusieurs types d'insertions virales dans le génome des bananiers peuvent conduire à une infection. Gayral Philippe, Guidolin Olivier, Blondin Laurence, Laboureau Nathalie, Royer Monique, Iskra Caruana Marie-Line. 2009. In : 12èmes Rencontres de virologie végétale, Aussois du 18 au 22 janvier 2009. Brault Véronique (ed.), Ziegler-Graff Véronique (ed.), Revers Frédéric (ed.). SFP. Paris : CNRS, Résumé, p. 64. Rencontres de virologie végétale. 12, Aussois, France, 18 January 2009/22 January 2009.
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Plusieurs types d'insertions virales dans le génome des bananiers peuvent conduire à une infection. Gayral Philippe, Guidolin Olivier, Blondin Laurence, Laboureau Nathalie, Royer Monique, Iskra Caruana Marie-Line. 2009. In : 12èmes Rencontres de virologie végétale, Aussois du 18 au 22 janvier 2009. SFP. s.l. : s.n., 1 p. Rencontres de virologie végétale. 12, Aussois, France, 18 January 2009/22 January 2009.

2008

Analyse, fonction et diversité des génomes viraux des plantes et élaboration de stratégies de lutte. Teycheney Pierre-Yves. 2008. Pointe-à-Pitre : UAG, 53 p. Habilitation à diriger des recherches : Université des Antilles et de la Guyane
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Analysis of genome-wide linkage disequilibrium in the highly polyploid sugarcane. Raboin Louis-Marie, Pauquet Jérôme, Butterfield Mike, D'Hont Angélique, Glaszmann Jean-Christophe. 2008. Theoretical and Applied Genetics, 116 (5) : pp. 701-714.
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BAC libraries construction from the ancestral diploid genomes of the allotetraploid cultivated peanut. Guimarães Patricia M., Garsmeur Olivier, Proite Karina, Leal-Bertioli Soraya C.M., Seijo Guilhermo, Chaine Christian, Bertioli David J., D'Hont Angélique. 2008. BMC Plant Biology, 8 (14), 8 p.
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Balayage du génome et évaluation du déséquilibre de liaison chez le sorgho à l'échelle mondiale et à l'échelle régionale du Mali. Bouchet Sophie. 2008. Montpellier : UM2, 178 p. Thèse de doctorat : Evolution, écologie, ressources génétiques, paléontologie : Université Montpellier 2

"Candidatus cloacamonas acidaminovorans": Genome sequence reconstruction provides a first glimpse of a new bacterial division. Pelletier Eric, Kreimeyer Annett, Bocs Stéphanie, Rouy Zoe, Gyapay Gabor, Chouari Rakia, Rivière Delphine, Ganesan Akila, Daegelen Patrick, Sghir Abdelghani, Cohen Georges N., Medigue Claudine, Weissenbach Jean, Le Paslier Denis. 2008. Journal of Bacteriology, 190 (7) : pp. 2572-2579.
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Construction of bacterial artificial chromosome (BAC) libraries of banana (Musa acuminata and Musa balbisiana). Piffanelli Pietro, Vilarinhos Alberto Duarte, Safar Jan, Sabau Xavier, Dolezel Jaroslav. 2008. Fruits, 63 (6) : pp. 375-379.
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Differential strain-specific diagnosis of the heartwater agent: Ehrlichia ruminantium. Vachiery Nathalie, Maganga Gaël Darren, Lefrançois Thierry, Kandassamy Yane, Stachurski Frédéric, Adakal Hassane, Ferraz Conchita, Morgat Anne, Bensaïd Albert, Coissac Eric, Boyer Frédéric, Demaille Jacques, Viari Alain, Martinez Dominique, Frutos Roger. 2008. Infection, Genetics and Evolution, 8 (4) : pp. 459-466. International Congress on Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases. 8, Bangkok, Thaïlande, 30 October 2006/2 November 2006.
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Evidence of infection by H5N2 highly pathogenic avian influenza viruses in healthy wild waterfowl. Gaidet Nicolas, Cattoli Giovanni, Hammoumi Saliha, Newman Scott, Hagemeijer Ward, Takekawa John Y., Cappelle Julien, Dodman Tim, Joannis Tony M., Gil Patricia, Monne Isabella, Fusaro Alice, Capua Ilaria, Manu Shiiwuua, Micheloni Pierfrancesco, Ottosson Ulf, Mshelbwala John H., Lubroth Juan, Domenech Joseph, Monicat François. 2008. PLoS Pathogens, 4 (8) : pp. 1-9.
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First complete chromosomal organization of a protozoan plant parasite (Phytomonas spp.). Marin Clotilde, Alberge Blandine, Dollet Michel, Pagès Michel, Bastien Patrick. 2008. Genomics, 91 (1) : pp. 88-93.
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Fungi have three tetraspanin families with distinct functions. Lambou Karine, Tharreau Didier, Kohler Annegret, Sirven Catherine, Marguerettaz Mélanie, Barbisan Crystel, Sexton Adrienne C., Kellner Ellen M., Martin Francis, Howlett Barbara J., Orbach M., Lebrun Marc-Henri. 2008. BMC Genomics, 9 (63), 14 p.
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Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A. Salzberg Steven L., Sommer Daniel D., Schatz Michael C., Phillipy Adam M., Rabinowicz Pablo D., Tsuge Seiji, Furutani Ayako, Ochiai Hirokazu, Delcher Arthur L., Kelley David, Madapu Ramana, Puiu Daniela, Radune Diana, Shumway Martin, Trapnell Cole, Aparna Gudlur, Jha Gopaljee, Pandey Alok, Patil Prabhu B., Hishihara Hiromichi, Szurek Boris, Meyer Damien. 2008. BMC Genomics, 9 (204), 16 p.
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A Genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance. Ballini Elsa, Morel Jean-Benoit, Droc Gaëtan, Price Adam H., Courtois Brigitte, Nottéghem Jean-Loup, Tharreau Didier. 2008. Molecular Plant-Microbe Interactions, 21 (7) : pp. 859-868.
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GreenPhylDB : a database for plant comparative genomics. Conte Matthieu, Gaillard Sylvain, Lanau Nadège, Rouard Mathieu, Perin Christophe. 2008. Nucleic Acids Research, 36, D991-D998
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High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi. Holt Kathryn E., Parkhill Julian, Mazzoni Camila J., Roumagnac Philippe, Weill François-Xavier, Goodhead Ian, Rance Richard, Baker Stephen, Maskell Duncan J., Wain John, Dolecek Christiane, Achtman Mark, Dougan Gordon. 2008. Nature Genetics, 40 (8) : pp. 987-993.
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Insights into the Musa genome : Syntenic relationships to rice and between Musa species. Lescot Magali, Piffanelli Pietro, Ciampi Ana, Ruiz Manuel, Blanc Guillaume, Leebens-Mack Jim, Da Silva Felipe, Santos Candice M.R., D'Hont Angélique, Garsmeur Olivier, Vilarinhos Alberto Duarte, Kanamori Hiroyuki, Matsumoto Takashi, Ronning Catherine, Cheung Foo, Haas Brian, Althoff Ryan, Arbogast Tammy, Hine Erin, Pappas Junior Georgios, Sasaki Takuji, Souza Manoel, Miller Roberto Neil Gerard, Glaszmann Jean-Christophe, Town Christopher. 2008. BMC Genomics, 9 (58), 20 p.
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Journées Jean Chevaugeon, VIIe rencontres de phytopathologie - mycologie de la Societé française de phytopathologie, du 20 au 24 janvier 2008 [Résumés]. Fernandez Diana (ed.), Carlier Jean (ed.), Tharreau Didier (collab.). 2008. Montpellier : CIRAD, 145 p. Journées Jean Chevaugeon, Rencontres de phytopathologie-mycologie. 7, Aussois, France, 20 January 2008/24 January 2008.

Natural polyploidy in Vanilla planifolia (Orchidaceae). Bory Séverine, Catrice Olivier, Brown Spencer, Leitch Ilia J., Gigant Rodolphe, Chiroleu Frédéric, Grisoni Michel, Duval Marie-France, Besse Pascale. 2008. Genome (Ottawa), 51 (10) : pp. 816-826.
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Novel sugarcane streak and sugarcane streak Reunion mastreviruses from southern Africa and La Réunion. Shepherd Dionne Natalie, Varsani Arvind, Windram Oliver P., Lefeuvre Pierre, Monjane Adérito Luis, Owor Betty E., Martin Darren Patrick. 2008. Archives of Virology, 153 (3) : pp. 605-609.
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Panicum streak virus diversity is similar to that observed for maize streak virus. Varsani Arvind, Oluwafemi Sunday, Windram Oliver P., Shepherd Dionne Natalie, Monjane Adérito Luis, Owor Betty E., Rybicki Edward P., Lefeuvre Pierre, Martin Darren Patrick. 2008. Archives of Virology, 153 (3) : pp. 601-604.
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Pathogeno-proteomics: Toward a new approach of host-vector-pathogen interactions. Holzmuller Philippe, Grébaut Pascal, Brizard Jean-Paul, Berthier David, Chantal Isabelle, Bossard Géraldine, Bucheton Bruno, Vezilier Frédéric, Chuchana Paul, Bras-Gonçalves Rachel, Lemesre Jean-Loup, Vicendeau Philippe, Cuny Gérard, Frutos Roger, Biron David George. 2008. Annals of the New York Academy of Sciences, 1149 : pp. 66-70. Biennial Conference of the Society for Tropical Veterinary Medicine. 9, Mexico, Mexique, 17 June 2007/22 June 2007.
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Phylogenomics of plant genomes : A methodology for genome-wide searches for orthologs in plants. Conte Matthieu, Gaillard Sylvain, Droc Gaëtan, Perin Christophe. 2008. BMC Genomics, 9 (183), 16 p.
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Recombination, decreased host specificity and increased mobility may have driven the emergence of maize streak virus as an agricultural pathogen. Varsani Arvind, Shepherd Dionne Natalie, Monjane Adérito Luis, Owor Betty E., Erdmann Julia B., Rybicki Edward P., Peterschmitt Michel, Briddon Rob W., Markham Peter G., Oluwafemi Sunday, Windram Oliver P., Lefeuvre Pierre, Lett Jean-Michel, Martin Darren Patrick. 2008. Journal of General Virology, 89 (9) : pp. 2063-2074.
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Transcriptional responses of the black-chinned tilapia Sarotherodon melanotheron to salinity extremes. Tine Mabye, De Lorgeril Julien, D'Cotta Helena, Pepey Elodie, Bonhomme François, Baroiller Jean-François, Durand Jean-Dominique. 2008. Marine Genomics, 1 (2) : pp. 37-46.
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Utilisation d'une séquence complète du génome d'une souche de Mycoplasma mycoides Subsp. Mycoides LC pour la mise au point de tests de diagnostic, application à l'expression de gènes héérologues. Salah Woubit. 2008. Toulouse : INPT, 192 p. Thèse de doctorat : Science vétérinaire : Institut national polytechnique de Toulouse

A protocol for the rapid isolation of full geminivirus genomes from dried plant tissue. Shepherd Dionne Natalie, Martin Darren Patrick, Lefeuvre Pierre, Monjane Adérito Luis, Owor Betty E., Rybicki Edward P., Varsani Arvind. 2008. Journal of Virological Methods, 149 (1) : pp. 97-102.
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A single Banana Streak Virus integration event in the banana genome as the origin of infectious endogenous pararetrovirus. Gayral Philippe, Noa-Carrazana Juan Carlos, Lescot Magali, Lheureux Fabrice, Lockhart Benham E.L., Matsumoto Takashi, Piffanelli Pietro, Iskra Caruana Marie-Line. 2008. Journal of Virology, 82 (13) : pp. 6697-6710.
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2007

Adding value to cocoa (Theobroma cacao L.) germplasm information with domestication history and admixture mapping. Marcano Maria, Pugh Tatiana, Cros Emile, Morales Sonia, Portillo Elvis, Courtois Brigitte, Glaszmann Jean-Christophe, Engels Johannes M.M., Phillips Wilbert, Astorga Carlos, Risterucci Ange-Marie, Fouet Olivier, Gonzalez Ventura, Rosenberg Kai, Vallat Isabelle, Dagert Manuel, Lanaud Claire. 2007. Theoretical and Applied Genetics, 114 (5) : pp. 877-884.

Avoidance of protein fold disruption in natural virus recombinants. Lefeuvre Pierre, Lett Jean-Michel, Reynaud Bernard, Martin Darren Patrick. 2007. PLoS Pathogens, 3 (11) : pp. 1782-1789.
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Begomovirus melting pot in the south-west Indian Ocean islands: Molecular diversity and evolution through recombination. Lefeuvre Pierre, Martin Darren Patrick, Hoareau Murielle, Naze Florence, Delatte Hélène, Thierry Magalie, Varsani Arvind, Becker Nathalie, Reynaud Bernard, Lett Jean-Michel. 2007. Journal of General Virology, 88 (12) : pp. 3458-3468.
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CIRAD - Sugarcane annual report 2005-2006. Goebel François-Régis (collab.). 2007. Montpellier : CIRAD, 88 p.

Caractérisation des translocations dans le génome de la banane par cytogénétique moléculaire. Bakry Frédéric, D'Hont Angélique. 2007. In : La plate-forme de recherches avancées Agropolis : génomique et biotechnologie. Savidan Yves (ed.). Agropolis. Montpellier : Agropolis, pp. 23-27. (Les dossiers d'Agropolis International, 5)

Caractérisation, au cours de croisement génétiques, de l'expression de séquences pathogènes du Banana streak virus intégrées dans le génome du bananier. Le Provost Grégoire, Lheureux Fabrice, Dielen Anne Sophie, Laboureau Nathalie, Teycheney Pierre-Yves, Iskra Caruana Marie-Line. 2007. In : 11 èmes Rencontres de virologie végétale, Aussois, 28 janvier au 1er février 2007. s.l. : s.n., Résumé, 1 p. Rencontres de virologie végétale. 11, Aussois, France, 28 January 2007/1 February 2007.
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Characterization of necrosis and ethylene-inducing proteins (NEP) in the basidiomycete Moniliophthora perniciosa, the causal agent of witches' broom in Theobroma cacao. Garcia Odalys, Macêdo Joci Neuby Alves, Tiburcio Ricardo, Zaparoli Gustavo, Rincones Johana, Bittencourt Livia Maria Cabral, Ceita Geruza Oliveira, Micheli Fabienne, Gesteira Abelmon, Mariano Andréa Cristina, Schiavinato Marlène A., Medrano Francisco J., Meinhardt Lyndel W., Pereira Gonçalo Amarante Guimarães, Cascardo Julio Cezar M.. 2007. Mycological Research, 111 (4) : pp. 443-455.
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Characterization of the expression of pathogenic Banana streak virus sequences integrated in the genome of banana during genetic crosses. Le Provost Grégoire, Lheureux Fabrice, Dielen Anne Sophie, Laboureau Nathalie, Teycheney Pierre-Yves, Iskra Caruana Marie-Line. 2007. In : First ISHS : ProMusa ProMusa Symposium: Recent advances in banana crop protection for sustainable production and improved livelihoods, White River, South Africa, 10-14 september 2007. ISHS. Montpellier : Cirad, Résumé, 1 p. International Symposium on recent advances in banana crop protection for sustainable production and improved livelihoods. 1, White River, Afrique du Sud, 10 September 2007/14 September 2007.
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Diversité de Vanilla planifolia G. Jackson dans l'Océan Indien et de ses espèces apparentées : aspects génétiques, cytogénétiques et épigénétiques. Bory Séverine. 2007. Saint-Denis : Université de la Réunion, 175 p. Thèse de doctorat : Sciences. Génétique : Université de la Réunion
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Ehrlichia ruminantium : genomic and evolutionary features. Frutos Roger, Viari Alain, Vachiery Nathalie, Boyer Frédéric, Martinez Dominique. 2007. Trends in Parasitology, 23 (9) : pp. 414-419.
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Epidémio-surveillance des vanilleraies de Mayotte et des Comores : rapport technique. Grisoni Michel, Abdoul-Karime Anli Liachouroutu. 2007. Mamoudzou : CIRAD, 48 p.
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Evidence for a founder effect after introduction of Tomato yellow leaf curl virus mild in an insular environment. Delatte Hélène, Holota Hélène, Moury Benoit, Reynaud Bernard, Lett Jean-Michel, Peterschmitt Michel. 2007. Journal of Molecular Evolution, 65 (1) : pp. 112-118.
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Evolution of hazardous integrations of Banana streak virus in the genome of the wild banana (Musa balbisiana). Gayral Philippe, Laboureau Nathalie, Iskra Caruana Marie-Line. 2007. In : 11th Evolutionary Biology Meeting, September 18-21, 2007, Marseilles. s.l. : s.n., Résumé, 1 p. Evolutionary Biology Meeting. 11, Marseille, France, 18 September 2007/21 September 2007.
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Genetic diversity in Coffea genus using microsatellites Loci. Cubry Philippe, Pot David, De Bellis Fabien, Musoli Chungason Pascal, Aluka P., Legnaté Hyacinthe, Dufour Magali, Leroy Thierry. 2007. In : 21st International Conference on Coffee Science, Montpellier (France), 11th - 15th September 2006 = 21ème Colloque scientifique international sur le café ; 21. Internationales Wissenshaftliches Kolloquium über Kaffee ; 21e Coloquio Cientifico Internacional sobre el Café. ASIC. Montpellier : ASIC, pp. 916-921. ISBN 2-900212-20-0 Colloque Scientifique International sur le Café. 21, Montpellier, France, 11 September 2006/15 September 2006.

Genetic diversity within Coffea canephora germplasm maintained in RCI using SSR markers, results and future prospects. Cubry Philippe, Musoli Chungason Pascal, Legnaté Hyacinthe, Aluka P., Dufour Magali, Pot David, De Bellis Fabien, Leroy Thierry. 2007. In : 21st International Conference on Coffee Science, Montpellier (France), 11th - 15th September 2006 = 21ème Colloque scientifique international sur le café ; 21. Internationales Wissenshaftliches Kolloquium über Kaffee ; 21e Coloquio Cientifico Internacional sobre el Café. ASIC. Montpellier : ASIC, pp. 912-915. ISBN 2-900212-20-0 Colloque Scientifique International sur le Café. 21, Montpellier, France, 11 September 2006/15 September 2006.

Genetic maps of clementine mandarin and intergeneric hybrid clementine X poncirus using genomic and EST microsatellite markers. Luro François, Costantino Gilles, Billot Claire, Froelicher Yann, Morillon Raphaël, Ollitrault Patrick, Terol Javier F., Talon Manuel, Gmitter Frederick G. Jr., Chen Chunxian. 2007. In : Abstracts of Plant and Animal Genomes XVth Conference, San Diego, CA (USA), January 13-17, 2007. s.l. : s.n., Résumé Plant and Animal Genomes Conference. 15, San Diego, États-Unis, 13 January 2007/17 January 2007.

Histoire évolutive d'une intégration virale pathogène : les EPRV du Banana streak virus chez les bananiers Musa balbisiana. Gayral Philippe, Laboureau Nathalie, Iskra Caruana Marie-Line. 2007. In : 11 èmes Rencontres de virologie végétale, Aussois, 28 janvier au 1er février 2007. s.l. : s.n., Résumé, 1 p. Rencontres de virologie végétale. 11, Aussois, France, 28 January 2007/1 February 2007.
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Importance de l'origine endogène du BSV dans l'émergence et le maintien d'épidémies. Laboureau Nathalie, Iskra Caruana Marie-Line, Blondin Laurence, Muller Emmanuelle. 2007. In : 11 èmes Rencontres de virologie végétale, Aussois, 28 janvier au 1er février 2007. s.l. : s.n., Résumé, 1 p. Rencontres de virologie végétale. 11, Aussois, France, 28 January 2007/1 February 2007.
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Legumes symbioses : Absence of Nod genes in photosynthetic bradyrhizobia. Giraud Eric, Moulin Lionel, Vallenet David, Barbe Valérie, Cytryn Eddie, Avarre Jean-Christophe, Jaubert Marianne, Simon Damien, Cartieaux Fabienne, Prin Yves, Béna Gilles, Hannibal Laure, Fardoux Joël, Kojadinovic Mila, Vuillet Laurie, Lajus Aurélie, Cruveiller Stéphane, Rouy Zoe, Mangenot Sophie, Segurens Béatrice, Dossat Carole, Franck William L., Chang Woo-Suk, Saunders Elizabeth, Bruce David, Richardson Paul, Normand Philippe, Dreyfus Bernard, Pignol David, Stacey Gary, Emerich David, Vermeglio André, Medigue Claudine, Sadowsky Michael. 2007. Science, 316 (5829) : pp. 1307-1312.

Molecular analysis of Banana streak virus (BSV) in the nuclear genome of Musa balbisiana. Noa-Carrazana Juan Carlos, Lescot Magali, Piffanelli Pietro, Safar Jan, Dolezel Jaroslav, Matsumoto Takashi, Silva-Rosales Laura, Lheureux Fabrice, Teycheney Pierre-Yves, Sasaki Takuji, Iskra Caruana Marie-Line. 2007. In : First ISHS : ProMusa ProMusa Symposium: Recent advances in banana crop protection for sustainable production and improved livelihoods, White River, South Africa, 10-14 september 2007. ISHS. Montpellier : Cirad, Résumé, 1 p. International Symposium on recent advances in banana crop protection for sustainable production and improved livelihoods. 1, White River, Afrique du Sud, 10 September 2007/14 September 2007.
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Molecular characterization of a pathogenic integration of the Golfinger Gf species of banana streak virus in the genome of Musa balbisiana. Gayral Philippe, Laboureau Nathalie, Iskra Caruana Marie-Line. 2007. In : First ISHS : ProMusa ProMusa Symposium: Recent advances in banana crop protection for sustainable production and improved livelihoods, White River, South Africa, 10-14 september 2007. ISHS. Montpellier : Cirad, Résumé, 1 p. International Symposium on recent advances in banana crop protection for sustainable production and improved livelihoods. 1, White River, Afrique du Sud, 10 September 2007/14 September 2007.
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Novel insights into the genomics of rice root adaptive development. Perin Christophe, Rebouillat Julia, Brasileiro Ana Christina Miranda, Dievart Anne, Gantet Pascal, Breitler Jean-Christophe, Johnson Alexander A.T., Courtois Brigitte, Ahmadi Nourollah, De Raïssac Marcel, Luquet Delphine, Conte Matthieu, This Dominique, Pati Pratap K., Le Q.H., Meynard Donaldo, Verdeil Jean-Luc, Guiderdoni Emmanuel. 2007. In : Rice genetics V : Proceedings of the fifth international rice genetics symposium, Manila, Philippines, 19-23 November 2005. Brar Darshan S. (ed.), Mackill David J. (ed.), Hardy Bill (ed.). IRRI. Londres : World Scientific, pp. 117-141. ISBN 981-270-772-7 International Rice Genetics Symposium. 5, Manille, Philippines, 19 November 2005/23 November 2005.
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Orthologous comparison in a gene-rich region among grasses reveals stability in the sugarcane polyploid genome. Jannoo Nazeema, Grivet Laurent, Chantret Nathalie, Garsmeur Olivier, Glaszmann Jean-Christophe, Arruda Paulo, D'Hont Angélique. 2007. Plant Journal, 50 (4) : pp. 574-585.
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Toward sequencing cotton (Gossypium) genomes. Chen Z. Jeffrey, Scheffler Brian, Dennis Elizabeth, Triplett Barbara .A., Zhang Tianzhen, Guo Wangzhen, Chen Xiaoqian, Stelly David M., Rabinowicz Pablo D., Town Christopher, Arioli Tony, Brubaker Curt, Cantrell Roy G., Lacape Jean-Marc, Ulloa Mauricio, Chee Peng, Gingle Alan R., Haigler Candace H., Percy Richard, Saha Sukumar, Wilkins Thea, Wright Robert J., Van Deynze Allen, Zhu Yuxian, Yu Shuxun, Abdurakhmonov Ibrokhim, Katageri Ishwarappa, Kumar P. Ananda, Mehboob-ur-Rahman, Zafar Yusuf, Yu John Z., Kohel Russell J., Wendel Jonathan F., Paterson Andrew H.. 2007. Plant Physiology, 145 : pp. 1303-1310.
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Utilization of chromosome painting as a complementary Tool for introgression analysis and chromosome identification in coffee. Herrera Juan Carlos, D'Hont Angélique, Lashermes Philippe. 2007. In : 21st International Conference on Coffee Science, Montpellier (France), 11th - 15th September 2006 = 21ème Colloque scientifique international sur le café ; 21. Internationales Wissenshaftliches Kolloquium über Kaffee ; 21e Coloquio Cientifico Internacional sobre el Café. ASIC. Montpellier : ASIC, pp. 660-664. ISBN 2-900212-20-0 Colloque Scientifique International sur le Café. 21, Montpellier, France, 11 September 2006/15 September 2006.

The exploration of the pathosystem BSV/Musa sp. : How does it work? Gayral Philippe, Lheureux Fabrice, Noa-Carrazana Juan Carlos, Lescot Magali, Piffanelli Pietro, Carreel Françoise, Jenny Christophe, Iskra Caruana Marie-Line. 2007. In : First Biosafenet Seminar, 6-8 June 2007, Venice, Italy. ICGEB. s.l. : s.n., Résumé, 1 p. Biosafenet Seminar. 1, Venise, Italie, 6 June 2007/8 June 2007.
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2006

Abscence de gènes nod chez certaines souches de Bradyrhizobium photosynthétiques révélée par l'analyse de la séquence de leurs génomes. Moulin L., Avarre Jean-Christophe, Jaubert Marianne, Barbe Valérie, Béna Gilles, Cartiaux F., Delajudie P., Dreyfus Bernard, Elmerich D., Fardoux Joël, Hannibal L., Kojadinovic Mila, Lajus Aurélie, Mangenot S.G., Medigue Claudine, Pignol David, Prin Yves, Rouy Zoe, Stacey Gary, Sadowsky Michael, Vallenet D., Vermeglio André, Vuillet Laurie, Giraud E.. 2006. In : 7èmes Rencontres plantes-bactéries, 20-23 mars 2006, Aussois, France. Résumés. SFP. Angers : INRA, Résumé, p. 39. Rencontres plantes-bactéries. 7, Aussois, France, 20 March 2006/24 March 2006.

Annual report 2004: sugarcane. Goebel François-Régis (collab.). 2006. Montpellier : CIRAD, 72 p.

CIRAD - Rapport annuel Canne à sucre 2005. Goebel François-Régis (collab.). 2006. Montpellier : CIRAD-CA, 72 p.

Compte-rendu de mission au Brésil, 25/03/2006 au 7/04/2006. Leroy Thierry, Marraccini Pierre, Pot David. 2006. Montpellier : CIRAD-CP, 20 p. N° de rapport : CP_DIC 1949
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Des virus dans le génome des plantes : l'ennemi intérieur. Iskra Caruana Marie-Line. 2006. In : 8ème Journées francophones de virologie, Paris, 20-21 avril 2006. s.l. : s.n., Résumé, 1 p. Journées francophones de virologie. 8, Paris, France, 20 April 2006/21 April 2006.
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Diversity arrays technology (DArT) : An efficient plateform for whole-genome profiling of crops. Wongtiem Prapit, Perera Chandrika, Risterucci Ange-Marie, Xia Ling, Patarapuwadol Sujin, Carlig Jason, Caig Vanessa, Evers Margaret, Uszynski Grzegorz, Wenzl Peter, Huttner Eric, Fregene Martin, De Vicente M. Carmen, Glaszmann Jean-Christophe, Kilian Andrzej. 2006. In : XIV Conference Plant and Animal Genome Conference, San Diego, Etats-Unis, 14-18 january 2006. s.l. : s.n., Diaporama, (21 vues) Plant and Animal Genomes Conference. 14, San Diego, États-Unis, 14 January 2006/18 January 2006.

Genotyping of Sugarcane yellow leaf virus in Colombia, Guadeloupe and Reunion. Abu Ahmad Youssef, Royer Monique, Costet Laurent, Daugrois Jean-Heinrich, Lett Jean-Michel, Victoria Jorge I., Rott Philippe. 2006. In : VIIIth ISSCT Pathology Workshop Petit-Bourg, Guadeloupe (FWI), 23-27 January 2006, programme and abstracts. Daugrois Jean-Heinrich. ISSCT, CIRAD-CA. Réduit : ISSCT, Résumé ISSCT Pathology Workshop. 8, Petit-Bourg, Guadeloupe, 23 January 2006/27 January 2006.
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Le décryptage des origines et de la diversité génétique du riz cultivé. Second Gérard, Glaszmann Jean-Christophe, Panaud Olivier. 2006. In : La France et le CGIAR : delivering scientific results for agricultural development = France and the CGIAR : delivering scientific results for agricultural development. Rocchi Daniel (ed.), Despréaux Denis (ed.), Frison Emile A. (ed.), Hubert Bernard (ed.), Lantin Manuel M. (ed.). Washington : CGIAR, pp. 11-14.

Le regard de la génomique sur la diversité naturelle des plantes cultivées. David Jacques, Loudet Olivier, Glaszmann Jean-Christophe. 2006. Biofutur (266) : pp. 22-27.

MADS Box Genes in Oil Palm (Elaeis guineensis) : Patterns in the Evolution of the SQUAMOSA, DEFICIENS, GLOBOSA, AGAMOUS, and SEPALLATA Subfamilies. Adam Hélène, Jouannic Stefan, Morcillo Fabienne, Richaud Frédérique, Duval Yves, Tregear James. 2006. Journal of Molecular Evolution, 62 (1) : pp. 15-31.
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Molecular biology of the morbilliviruses. Barrett Thomas, Banyard Ashley C., Diallo Adama. 2006. In : Rinderpest and peste des petits ruminants : virus plagues of large and small ruminants. Barrett Thomas (ed.), Pastoret Paul-Pierre (ed.), Taylor William P. (ed.). Londres : Academic Press, pp. 31-67. (Biology of animal infections, 2) ISBN 978-0-12-088385-1

OryGenesDB: A database for rice reverse genetics. Droc Gaëtan, Ruiz M., Larmande Pierre, Pereira Andy, Piffanelli Pietro, Morel Jean-Benoit, Dievart Anne, Courtois Brigitte, Guiderdoni Emmanuel, Perin Christophe. 2006. Nucleic Acids Research, 34 : pp. 736-740.
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Rapport annuel 2004 : canne à sucre. Goebel François-Régis (collab.). 2006. Montpellier : CIRAD, 72 p.

Un graal moléculaire : recherche de marqueurs microsatellites chez les champignons. Dutech Cyril, Fournier Elisabeth, Enjalbert Jérôme, Delmotte François, Barrès Benoit, Carlier Jean, Tharreau Didier, Giraud Tatiana. 2006. In : Journées Jean Chevaugeon : VIe rencontres de phytopathologie - mycologie de la Societé française de phytopathologie du 15 au 19 janvier 2006 [Résumés]. Fernandez Diana (ed.), Carlier Jean (ed.), Tharreau Didier (ed.). CIRAD, INRA, IRD, Bayer cropscience, SFP. Montpellier : CIRAD, Résumé, p. 22. Journées Jean Chevaugeon, Rencontres de phytopathologie-mycologie. 6, Aussois, France, 15 January 2006/19 January 2006.

Validation of diversity arrays technology (DArT) as a plateform for whole-genome profiling in orphan crops. Wongtiem Prapit, Perera Chandrika, Risterucci Ange-Marie, Xia Ling, Patarapuwadol Sujin, Carlig Jason, Caig Vanessa, Evers Margaret, Uszynski Grzegorz, Huttner Eric, Wenzl Peter, Fregene Martin, De Vicente M. Carmen, Glaszmann Jean-Christophe, Kilian Andrzej. 2006. In : XIV Conference Plant and Animal Genome Conference, 2006-01. 14-18, San Diego, Etats-Unis. s.l. : s.n., 1 p. Plant and Animal Genomes Conference. 14, San Diego, États-Unis, 14 January 2006/18 January 2006.

2005

AFLP and SSR polymorphism in a Coffea interspecific backcross progeny ((Coffea heterocalyx x C. canephora) x C. canephora). Hamon Perla, Coulibaly Issa, Revol Benoît, Noirot Michel, Poncet Valérie, Lorieux Mathias, Carasco-Lacombe Catherine, Minier Jérôme, Dufour Magali, Hamon Serge. 2005. In : 20th International Conference on Coffee Science, 11-15 October 2004, Bangalore, India = 20ème Colloque Scientifique International sur le Café ; 20. Internationales Wissenshaftliches Kolloquium über Kaffee ; 20e Coloquio Cientifico Internacional sobre el Café. ASIC. Paris : ASIC, pp. 699-701. ISBN 2-900212-19-7 Colloque Scientifique International sur le Café. 20, Bangalore, Inde, 11 October 2004/15 October 2004.

Analysis of the Musa genome from BAC sequencing and its comparison with rice. Piffanelli Pietro, Ciampi Ana, Ruiz Manuel, Rodrigues da Silva Felipe, Lescot Magali, Papas Georgios J., Ronning Catherine, Haas Brian, Wortman Jennifer, Frison Emile A., Roux Nicolas, Miller Roberto Neil Gerard, Côte François-Xavier, D'Hont Angélique, Souza Manoel, Glaszmann Jean-Christophe, Town Christopher. 2005. In : Abstracts of Plant and Animal Genomes XIIIth Conference, San Diego, CA (USA), January 15-19, 2005. s.l. : s.n., Résumé Plant and Animal Genomes Conference. 13, San Diego, États-Unis, 15 January 2005/19 January 2005.

Banana virus x (BVX), a novel flexivirus harbouring defective RNAS, definies a new genus within the Flexiviridae family. Teycheney Pierre-Yves, Marais Armelle, Svanella-Dumas Laurence, Candresse Thierry. 2005. In : Microbes in a changing world = XIIIth International Congress of Virology, San Fransisco (USA), July 23-28, 2005. s.l. : s.n., 2 p. International Congress of Virology. 13, San Francisco, États-Unis, 23 July 2005/28 July 2005.
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Biodiversity of mycoplasmas and molecular epidemiology. Thiaucourt François, Roger François. 2005. In : Mycoplasmas: molecular biology, pathogenicity and Ssrategies for control. Section 3: pathogenicity and control. Eds. A. Blanchard, G. Browning. Norfolk : Horizon Bioscience, pp. 415-437.
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Caractérisation de la diversité génétique des Begomovirus responsables de la maladie de la mosaïque du manioc dans les archipels des Comores et des Seychelles. Villar Emilie. 2005. Paris : Université Pierre et Marie Curie, 39 p. Mémoire de master : Pathologie et protection intégrée : Université Pierre et Marie Curie

Construction and characterization of a Coffea canephora BAC library to study the organization of sucrose biosynthesis genes. Leroy Thierry, Marraccini Pierre, Dufour Magali, Montagnon Christophe, Lashermes Philippe, Sabau Xavier, Ferreira Lucia Pires, Jourdan Isabelle, Pot David, Andrade Alan Carvalho, Glaszmann Jean-Christophe, Vieira Luiz Gonzaga Esteves, Piffanelli Pietro. 2005. Theoretical and Applied Genetics, 111 (6) : pp. 1032-1041.
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Identification de marqueurs moléculaires associés à la recrudescence de l'échaudure des feuilles de la canne à sucre causée par Xanthomonas albilineans. Champoiseau Patrice, Renier Adeline, Daugrois Jean-Heinrich, Royer Monique, Rott Philippe. 2005. In : Société française de phytopathologie, VIème congrés, 23-24-25 février 2005, Toulouse : programme et résumés des communications. SFP, INRA, CNRS, ENSAT-INP, UPS, IFR FR40. Paris : Société française de phytopathologie, Résumé, p. 30. Congrès de la Société française de phytopathologie. 6, Toulouse, France, 23 February 2005/25 February 2005.

Molecular characterization of banana virus X (BVX), a novel member of the Flexiviridae family. Teycheney Pierre-Yves, Marais Armelle, Svanella-Dumas Laurence, Dulucq M.J., Candresse Thierry. 2005. Archives of Virology, 150 (9) : pp. 1715-1727.
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South West Indian Ocean islands tomato begomovirus populations represent a new major monopartite begomovirus group. Delatte Hélène, Martin Darren Patrick, Naze Florence, Goldbach Rob, Reynaud Bernard, Peterschmitt Michel, Lett Jean-Michel. 2005. Journal of General Virology, 86 (5) : pp. 1533-1542.
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Toward an integrated physical map of the coffee genome. Lashermes Philippe, Noir S., Combes Marie-Christine, Ansaldi C., Bertrand Benoît, Anthony François. 2005. In : 20th International Conference on Coffee Science, 11-15 October 2004, Bangalore, India = 20ème Colloque Scientifique International sur le Café ; 20. Internationales Wissenshaftliches Kolloquium über Kaffee ; 20e Coloquio Cientifico Internacional sobre el Café. ASIC. Paris : ASIC, pp. 554-559. ISBN 2-900212-19-7 Colloque Scientifique International sur le Café. 20, Bangalore, Inde, 11 October 2004/15 October 2004.

Transposition of MINE, a composite retrotransposon, in the avirulence gene ACE1 of the rice blast fungus Magnaporthe grisea. Fudal Isabelle, Böhnert Heidi U., Tharreau Didier, Lebrun Marc-Henri. 2005. Fungal Genetics and Biology, 42 (9) : pp. 761-772.
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Use of cpSSRs for the characterisation of yam phylogeny in Benin. Chaïr Hâna, Perrier Xavier, Agbangla Clément, Marchand Jean-Leu, Dainou O., Noyer Jean-Louis. 2005. Genome (Ottawa), 48 : pp. 674-684.
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A framework for genetic diversity analysis in the generation Cp. Glaszmann Jean-Christophe. 2005. In : Abstracts of Plant and Animal Genomes XIIIth Conference, San Diego, CA (USA), January 15-19, 2005. s.l. : s.n., Résumé Plant and Animal Genomes Conference. 13, San Diego, États-Unis, 15 January 2005/19 January 2005.

The genome of the heartwater agent Ehrlichia ruminantium contains multiple tandem repeats of actively variable copy number. Collins Nicola E., Liebenberg Junita, De Villiers Etienne P., Brayton Kelly A., Louw Elmarié, Pretorius Alri, Faber F. Erika, Van Heerden Henriette, Josemans Antoinette, Van Kleef Mirinda, Steyn Helena C., Van Strijp M. Fransie, Zweygarth Erich, Jongejan Frans, Maillard Jean-Charles, Berthier David, et al.. 2005. Proceedings of the National Academy of Sciences of the United States of America, 102 (3) : pp. 838-843.
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The map-based sequence of the rice genome. Burr Benjamin, Sasaki Takuji, D'Hont Angélique, et al.. 2005. Nature, 436 : pp. 793-800.
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2004

Biologie et épidémiologie de Xanthomonas sp. pv. Mangiferae indicae. Pruvost Olivier. 2004. In : Réunion annuelle Flhor, Montpellier, 5-9 juillet 2004. CIRAD-FLHOR-ARF. Montpellier : CIRAD, 23 p. Réunion annuelle FLHOR, Montpellier, France, 5 July 2004/9 July 2004.

Biotechnology in tropical crop plants. Billotte Norbert. 2004. In : Abstracts of the International LINK2PALM 2004 Symposium on application of biotechnology to coconut and oil palm, April 19-21, 2004, Manila, Philippines. MPIZ, PCA, PCA-ARC. Cologne : MPIZ, 2 p. International LINK2PALM 2004 Symposium on Application of Biotechnology to Coconut and Oil Palm, Manille, Philippines, 19 April 2004/21 April 2004.

Canne à sucre et cannes sauvages : origine et structure des génomes. D'Hont Angélique. 2004. Comptes Rendus des Séances de l'Académie d'Agriculture de France, 90 (3) : p. 23. Séance de l'Académie d'Agriculture de France "La canne à sucre : origine, génétique et amélioration variétale", Paris, France, 24 March 2004.

Cartographie génétique de Coffea canephora et premières analyses du déséquilibre de liaison dans onze populations. Avia Komlan. 2004. Rennes : Université de Rennes I, 34 p. Mémoire DEA : Génétique, adaptation et productions végétales : Université de Rennes I

Comparative analysis of Musa and rice genome structure and organization. Piffanelli Pietro, Ciampi Ana, Ruiz Manuel, Rodrigues da Silva Felipe, Papas Georgios J., Ronning Catherine, Haas Brian, Wortman Jennifer, Frison Emile A., Roux Nicolas, Miller Roberto Neil Gerard, Côte François-Xavier, D'Hont Angélique, Souza Manoel, Glaszmann Jean-Christophe, Town Christopher. 2004. In : First International congress on #Musa#: harnessing research for improved livelihoods, 6-9 July 2004, Penang, Malaysia. Abstract guide. Picq Claudine (ed.), Vézina Anne (ed.). INIBAP, MARDI, BAPNET, University of Malaya, University of Putra, IPGRI. Montpellier : INIBAP, Résumé, p. 21. International Congress on Musa: Harnessing Research for Improved Livelihoods. 1, Penang, Malaisie, 6 July 2004/9 July 2004.

Creation of BAC genomic for cocoa (Theobroma cacao L.) for physical mapping of RGA containing BAC clones. Clément Didier, Lanaud Claire, Sabau Xavier, Fouet Olivier, Le Cunff Loïc, Ruiz E., Risterucci Ange-Marie, Glaszmann Jean-Christophe, Piffanelli Pietro. 2004. Theoretical and Applied Genetics, 108 (8) : pp. 1627-1634.

Creation of a BAC resource to study the structure and evolution of the banana (Musa balbisiana) genome. Safar Jan, Noa-Carrazana Juan Carlos, Vrana Jan, Bartos Jan, Alkhimova Olena, Sabau Xavier, Simkova Hana, Lheureux Fabrice, Caruana Marie-Line, Dolezel Jaroslav, Piffanelli Pietro. 2004. Genome (Ottawa), 47 (6) : pp. 1182-1191.

Elaboration et gestion de la qualité. Bachelier Bruno. 2004. In : Recherche pour une production cotonnière durable et compétitive : session de formation du 22 au 26 novembre 2004, Montpellier. CIRAD-CA-COTON. Montpellier : CIRAD, Diaporama, 1 diaporama Session de formation sur la recherche pour une production cotonnière durable et compétitive, Montpellier, France, 22 November 2004/26 November 2004.

Etude de l'hérédité des composés d'arôme chez les hybrides somatiques d'agrumes. Gancel Anne Laure. 2004. In : Réunion annuelle Flhor, Montpellier, 5-9 juillet 2004. CIRAD-FLHOR-ARF. Montpellier : CIRAD, 19 p. Réunion annuelle FLHOR, Montpellier, France, 5 July 2004/9 July 2004.

Etude à échelle locale, aux Antilles et au Cameroun, de la structure génétique des populations de Mycosphaerella musicola, agent de la maladie de Sigatoka des bananiers. Schmaltz Barbara. 2004. Pointe-à-Pitre : UAG, 35 p. Mémoire DEA : Environnement tropical et valorisation de la biodiversité : Université des Antilles et de la Guyane

Genetic maps of RAPD, AFLP and ISSR markers in Ananas bracteatus and A. comosus using the pseudo-testcross strategy. Carlier Jorge D., Reis A., Duval Marie-France, Coppens D'Eeckenbrugge Géo, Leitão José Manuel. 2004. Plant Breeding, 123 (2) : pp. 186-192.
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Génétique d'une graminée hautement polyploïde : apports de la génomique. Glaszmann Jean-Christophe. 2004. Comptes Rendus des Séances de l'Académie d'Agriculture de France, 90 (3) : p. 24. Séance de l'Académie d'Agriculture de France "La canne à sucre : origine, génétique et amélioration variétale", Paris, France, 24 March 2004.

Inter and intraspecific variations revealed by Randon Amplified Microsatellites in Phytophthora isolates fro citrus in Corsica. Cohen Séverine, Allasia Valérie, Venard Paul, Notter Sylvia, Dubois Albert, Raffanel B., Vernière Christian, Panabières Franck. 2004. In : Réunion annuelle Flhor, Montpellier, 5-9 juillet 2004. CIRAD-FLHOR-ARF. Montpellier : CIRAD, 1 p. Réunion annuelle FLHOR, Montpellier, France, 5 July 2004/9 July 2004.

Maize yellow stripe : Maize yellow stripe virus (Possible member of the Tenuivirus genus). Ammar El-Desouky, Peterschmitt Michel. 2004. In : Viruses and virus diseases of Poaceae (Gramineae). Lapierre Hervé (ed.), Signoret Pierre A. (ed.). Paris : INRA, pp. 682-687. (Mieux comprendre) ISBN 2-7380-1088-1

Maladie du Huanglongbing des agrumes : diversité de l'agent causal Candidatus liberibacter par l'étude d'un gène codant une protéine de la membrane externe (OMP). Bastianel C., Eveillard S., Garnier-Semancik M.. 2004. In : Réunion annuelle Flhor, Montpellier, 5-9 juillet 2004. CIRAD-FLHOR-ARF. Montpellier : CIRAD, 1 p. Réunion annuelle FLHOR, Montpellier, France, 5 July 2004/9 July 2004.

Meager genetic variability of the human malaria agent Plasmodium vivax. Leclerc Marie Claude, Durand Patrick Y., Gauthier Catherine, Patot S., Billotte Norbert, Menegon Michela, Severini Carlo, Ayala F.J., Renaud François. 2004. Proceedings of the National Academy of Sciences of the United States of America, 101 (40) : pp. 14454-14460.
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Molecular analysis of banana streak virus integrants in the nuclear genome of Musa balbisiana. Piffanelli Pietro, Noa-Carrazana Juan Carlos, Benabdelmouna Abdellah, Matsumoto Takashi, Silva-Rosales Laura, Lheureux Fabrice, Teycheney Pierre-Yves, Geering Andrew D., D'Hont Angélique, Frison Emile A., Roux Nicolas, Côte François-Xavier, Glaszmann Jean-Christophe, Sasaki Takuji, Caruana Marie-Line. 2004. In : First International congress on #Musa#: harnessing research for improved livelihoods, 6-9 July 2004, Penang, Malaysia. Abstract guide. Picq Claudine (ed.), Vézina Anne (ed.). INIBAP, MARDI, BAPNET, University of Malaya, University of Putra, IPGRI. Montpellier : INIBAP, Résumé, p. 36. International Congress on Musa: Harnessing Research for Improved Livelihoods. 1, Penang, Malaisie, 6 July 2004/9 July 2004.
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Présentation des activités INRA Bordeaux. Jagoueix-Eveillard Sandrine. 2004. In : Réunion annuelle Flhor, Montpellier, 5-9 juillet 2004. CIRAD-FLHOR-ARF. Montpellier : CIRAD, 31 p. Réunion annuelle FLHOR, Montpellier, France, 5 July 2004/9 July 2004.

Rapport annuel 2003 : canne à sucre. CIRAD-CA-Canne à sucre - FRA. 2004. Montpellier : CIRAD-CA, 79 p. ISBN 2-87614-588-X

Research on sugarcane at CIRAD. Domaingue Robert. 2004. International Sugar Journal, 106 (1272) : pp. 673-675.

Sugarcane streak virus diseases : Sugarcane streak mastrevirus, sugarcane streak Egypt mastrevirus, sugarcane streak Mauritius mastrevirus. Peterschmitt Michel, Rott Philippe. 2004. In : Viruses and virus diseases of Poaceae (Gramineae). Lapierre Hervé (ed.), Signoret Pierre A. (ed.). Paris : INRA, pp. 711-714. (Mieux comprendre) ISBN 2-7380-1088-1

TropGENE-DB, a multi-tropical crop formation system. Ruiz Manuel, Rouard Mathieu, Raboin Louis-Marie, Lartaud Marc, Lagoda Pierre, Courtois Brigitte. 2004. Nucleic Acids Research, 32, D364-D367
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Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers. Nguyen Trung-Bieu, Giband Marc, Brottier Philippe, Risterucci Ange-Marie, Lacape Jean-Marc. 2004. Theoretical and Applied Genetics, 109 (1) : pp. 167-175.

A new cacao linkage map based on codominant markers : development and integration of 201 new microsatellite markers. Pugh Tatiana, Fouet Olivier, Risterucci Ange-Marie, Brottier Philippe, Abouladze M., Delettrez Claire, Courtois Brigitte, Clément Didier, Larmande Pierre, N'Goran Jeanne A.K., Lanaud Claire. 2004. Theoretical and Applied Genetics, 108 (6) : pp. 1151-1161.

2003

Application of cleaved amplified polymorphic sequence method for analysis of cytoplasmic genome among Aurantioideae intergeneric somatic hybrids. Lotfy Samia, Luro François, Carreel Françoise, Froelicher Yann, Rist Delphine, Ollitrault Patrick. 2003. Journal of the American Society for Horticultural Science, 128 (2) : pp. 225-230.
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Asian rice. Glaszmann Jean-Christophe, Grivet Laurent, Courtois Brigitte, Noyer Jean-Louis, Luce Claude, Jacquot Michel, Albar Laurence, Ghesquière Alain, Second Gérard. 2003. In : Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 77-98. ISBN 1-57808-264-1
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Banana. Jenny Christophe, Carreel Françoise, Tomekpé Kodjo, Perrier Xavier, Dubois Cécile, Horry Jean-Pierre, Tézenas Du Montcel Hugues. 2003. In : Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 99-124. ISBN 1-57808-264-1
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Biochemical and molecular markers. Grivet Laurent, Noyer Jean-Louis. 2003. In : Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 1-29. ISBN 1-57808-264-1
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Cacao. Lanaud Claire, Motamayor Juan Carlos, Sounigo Olivier. 2003. In : Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 125-156. ISBN 1-57808-264-1
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Characterization of the first Coffea canephora BAC library [S04-17]. Leroy Thierry, Dufour Magali, Montagnon Christophe, Lashermes Philippe, Noirot Michel, Marraccini Pierre, Glaszmann Jean-Christophe, Piffanelli Pietro. 2003. In : 7th International Congress of Plant Molecular Biology, ISPMB 2003, Barcelona (Spain), June 23-28. Book of abstracts. ISPMB. Barcelone : ISPMB Office, Résumé, p. 62. International Congress of Plant Molecular Biology. 7, Barcelone, Espagne, 23 June 2003/28 June 2003.
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Citrus. Ollitrault Patrick, Jacquemond Camille, Dubois Cécile, Luro François. 2003. In : Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 193-217. ISBN 1-57808-264-1
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Creation of bac genomic for cocoa (Theobroma cacao L.) [S04-15). Clément Didier, Lanaud Claire, Glaszmann Jean-Christophe, Piffanelli Pietro. 2003. In : 7th International Congress of Plant Molecular Biology, ISPMB 2003, Barcelona (Spain), June 23-28. Book of abstracts. ISPMB. Barcelone : ISPMB Office, Résumé, p. 61. International Congress of Plant Molecular Biology. 7, Barcelone, Espagne, 23 June 2003/28 June 2003.

Diversité génétique du virus de la mosaïque en tirets du bananier (BSV). Teycheney Pierre-Yves. 2003. In : 9ème Rencontres de virologie végétale, du 2 au 6 février 2003, Aussois, France. Pierre Yot ; CNRS. Strasbourg : CNRS Rencontres de virologie végétale. 9, Aussois, France, 2 February 2003/6 February 2003.

Etude de la biologie et de la diversité du sugarcane bacilliform virus. Dupuy Virginie. 2003. Pau : UPPA, 32 p. Mémoire DESS : Protection et valorisation du végétal : Université de Pau et des Pays de l'Adour

Evoquer la disparition programmée de la banane n'est pas réaliste. Lescot Thierry, Côte François-Xavier, Masbou Olivier (collab.). 2003. FLD Magazine : pp. 33-36.

Exploration du génome de la canne à sucre par séquençage EST : [2001-02]. Grivet Laurent, D'Hont Angélique. 2003. In : Le Cirad au Brésil : rapport d'activités 2001-2002. Hainzelin Etienne (ed.). CIRAD. Brasilia : CIRAD, pp. 16-17.

Exploração do genoma da cana-de-açucar por seqüenciamento EST : [2001-02]. Grivet Laurent, D'Hont Angélique. 2003. In : O Cirad no Brasil : relatorio de atividades 2001-2002. Hainzelin Etienne (ed.). CIRAD. Brasilia : CIRAD, pp. 16-17.

Genome distribution and characterization of sugarcane resistance gene analogs. Rossi Magdalena, Araujo Paula G., Garsmeur Olivier, Dias Viviane M., Paulet Florence, Chen Hui, Van Sluys Marie-Anne, D'Hont Angélique. 2003. . s.l. : s.n., Résumé Plant and Animal Genomes Conference. 11, San Diego, États-Unis, 11 January 2003/15 January 2003.

Genomic distribution and characterization of EST-derived resistance gene analogs (RGAs) in sugarcane. Rossi Magdalena, Araujo Paula G., Paulet Florence, Garsmeur Olivier, Dias Viviane M., Chen Hui, Van Sluys Marie-Anne, D'Hont Angélique. 2003. Molecular Genetics and Genomics, 269 (3) : pp. 406-419.

Genomic sequencing in sugarcane; first insight into the physical organization of the genome and microsynteny with other grasses. Jaunoo Nazeema, Grivet Laurent, D'Hont Angélique, Arruda Paulo. 2003. . s.l. : s.n., Résumé Plant and Animal Genomes Conference. 11, San Diego, États-Unis, 11 January 2003/15 January 2003.

Genomic sequencing in sugarcane; first insight into the physical organization of the genome and microsynteny with other grasses. Jaunoo Nazeema, Grivet Laurent, D'Hont Angélique, Arruda Paulo. 2003. In : IVth Molecular biology workshop, Montpellier, France, 7-11 April 2003 [Abstracts]. ISSCT, Languedoc-Roussillon-Conseil régional, CIRAD-CA. Montpellier : CIRAD-CA, Résumé, p. 5. Molecular Biology Workshop. 4, Montpellier, France, 7 April 2003/11 April 2003.

Identification et localisation de QTL associés à la plasticité phénotypique du système racinaire chez des lignées recombinantes de riz issues du croisement d'IR64 (indica) et d'Azucena (Japonica). Rahantaharimanana Fanjavola. 2003. Paris : INA-PG, 34 p. Mémoire DEA : Sciences agronomiques : Institut national agronomique Paris-Grignon

Integration patterns of Banana streak virus into banana nuclear genome [S25-10]. Noa-Carrazana Juan Carlos, Vilarinhos Alberto Duarte, Caruana Marie-Line, Lheureux Fabrice, Teycheney Pierre-Yves, Sabau Xavier, Glaszmann Jean-Christophe, Dolezel Jaroslav, Piffanelli Pietro. 2003. In : 7th International Congress of Plant Molecular Biology, ISPMB 2003, Barcelona (Spain), June 23-28. Book of abstracts. ISPMB. Barcelone : ISPMB Office, Résumé, p. 361. International Congress of Plant Molecular Biology. 7, Barcelone, Espagne, 23 June 2003/28 June 2003.

Le bananier et le BSV : réveil d'un virus dormant. Lheureux Fabrice, Carreel Françoise, Jenny Christophe, Lockhart Benham E.L., Iskra Caruana Marie-Line. 2003. In : 9ème Rencontres de virologie végétales, 2-6 février 2003, Aussois. s.l. : s.n., 1 p. Rencontres de virologie végétale. 9, Aussois, France, 2 February 2003/6 February 2003.

Les pararétrovirus endogènes (EPRV), voie nouvelle de transmission des virus de plantes. Caruana Marie-Line, Lheureux Fabrice, Teycheney Pierre-Yves. 2003. Virologie, 7 (4) : pp. 255-265.

Les séquences pararétrovirales endogènes des plantes : nouvelle voie d'émergence du virus de mosaïque en tirets des bananiers. Iskra Caruana Marie-Line, Lheureux Fabrice, Dallot Sylvie. 2003. In : 5ème Journées francophones de virologie, 10-11 avril 2003, Paris. s.l. : s.n., Résumé, 1 p. Journées francophones de virologie. 5, Paris, France, 10 April 2003/11 April 2003.

Molecular evidence for sugarcane evolution and domestication. Grivet Laurent, Glaszmann Jean-Christophe, D'Hont Angélique. 2003. In : IVth Molecular biology workshop, Montpellier, France, 7-11 April 2003 [Abstracts]. ISSCT, Languedoc-Roussillon-Conseil régional, CIRAD-CA. Montpellier : CIRAD-CA, Résumé, p. 1. Molecular Biology Workshop. 4, Montpellier, France, 7 April 2003/11 April 2003.

Rapport annuel 2002 : canne à sucre. CIRAD-CA-Canne à sucre - FRA. 2003. Montpellier : CIRAD-CA, 83 p. ISBN 2-87614-557-X

Research on genetic resources and the genome : A need for regional partnership. The example of sugar cane. Raboin Louis-Marie. 2003. In : Actes des assises de la recherche dans l'Océan Indien : 3-5 juin 2003, Saint-Denis, La Réunion = Meeting for the advancement of research in the Indian Ocean. Réunion-Conseil régional, Université de la Réunion, CIRAD, IFREMER, INRA, IRD. Saint-Denis : Région Réunion, Diaporama, (9 vues) Assises de la recherche dans l'Océan Indien. 1, Saint-Denis, Réunion, 3 June 2003/5 June 2003.
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Rubber tree (Hevea brasiliensis). Seguin Marc, Flori Albert, Legnaté Hyacinthe, Clément-Demange André. 2003. In : Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 277-305. ISBN 1-57808-264-1
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Sugarcane genome analysis at CIRAD. Raboin Louis-Marie, D'Hont Angélique. 2003. In : International Seminar on Sugarcane Genomics and Genetic Transformation, 28th and 29th August, 2003. VSI. Maharashtra : Vasantdada Sugar Institute, pp. 1-5. International Seminar on Sugarcane Genomics and Genetic Transformation, Pune, Inde, 28 August 2003/29 August 2003.

Targeted introgression of cotton fiber quality QTLs using molecular markers. Lacape Jean-Marc, Nguyen Trung-Bieu, Hau Bernard, Giband Marc. 2003. In : International Workshop on Marker Assisted Selection: A Fast Track to Increase Genetic Gain in Plant and Animal Breeding ?, 17-18 October 2003, Turin, Italy. s.l. : s.n., 11 p. International Workshop on Marker Assisted Selection: A Fast Track to Increase Genetic Gain in Plant and Animal Breeding ?, Turin, Italie, 17 October 2003/18 October 2003.

Tropgene DB sugarcane. Raboin Louis-Marie. 2003. In : IVth Molecular biology workshop, Montpellier, France, 7-11 April 2003 [Abstracts]. ISSCT, Languedoc-Roussillon-Conseil régional, CIRAD-CA. Montpellier : CIRAD-CA, Résumé, p. 13. Molecular Biology Workshop. 4, Montpellier, France, 7 April 2003/11 April 2003.

Unstable balance of relation between parretrovirus and its host plant : the BSV-EPRV banana pathosystem. Iskra Caruana Marie-Line, Lheureux Fabrice, Noa-Carrazana Juan Carlos, Piffanelli Pietro, Carreel Françoise, Jenny Christophe, Laboureau Nathalie, Lockhart Benham E.L.. 2003. In : Abstracts : EMBO Workshop Genomic Approaches in Plant Virology, May 28-31, 2003, Keszthely, Hungary. s.l. : s.n., Résumé, p. 8. EMBO Workshop Genomic Approaches in Plant Virology, Keszthely, Hongrie, 28 May 2003/31 May 2003.

Using SD-AFLP and MSAP to assess CCGG methylation in the banana genome. Baurens Franc-Christophe, Bonnot François, Bienvenu David, Causse Sandrine, Legavre Thierry. 2003. Plant Molecular Biology Reporter, 21 : pp. 339-348.

Virologie : menace fantôme sur le bananier. Teycheney Pierre-Yves, Caruana Marie-Line. 2003. In : La science au présent 2003 : une année d'actualité scientifique et technique. Giuseppe Annoscia, Yves Gautier. Paris : Encyclopaedia Universalis, p. 83.

2002

Annual report 2001 : sugarcane. CIRAD-CA-Canne à sucre - FRA. 2002. Montpellier : CIRAD-CA, 83 p. ISBN 2-87614-524-3

Ascertaining maternal and paternal lineage within Musa by chloroplast and mitochondrial DNA RFLP analyses. Carreel Françoise, Gonzalez De Léon Diego, Lagoda Pierre, Lanaud Claire, Jenny Christophe, Horry Jean-Pierre, Tézenas Du Montcel Hugues. 2002. Genome (Ottawa), 45 (4) : pp. 679-692.

Bananier : l'ennemi intérieur. Teycheney Pierre-Yves, Iskra Caruana Marie-Line. 2002. La Recherche (353) : pp. 34-38.

Endogenous Banana streak virus sequences in Musa genome : a new risk for breeding program. Lheureux Fabrice, Carreel Françoise, Jenny Christophe, Laboureau Nathalie, Lockhart Benham E.L., Iskra Caruana Marie-Line. 2002. In : The world of microbes : XIIth International Congress of Virology, Paris, 27th July to 1st August 2002. SFM, IUMS. Paris : EDK, Résumé, p. 227. International Congress of Virology. 11, Paris, France, 27 July 2002/1 August 2002.

GENOPLANTE, a new program for plant genome analysis in France. Caboche Michel, Pelletier Georges. 2002. In : Journées Jean Chevaugeon : IVe rencontres de phytopathologie - mycologie du 13 au 17 mars 2002. [Résumés]. CIRAD-MIDEC, INRA, CNRS, SFP. Montpellier : CIRAD, Résumé, 1 p. Journées Jean Chevaugeon, Rencontres de phytopathologie-mycologie. 4, Aussois, France, 13 March 2002/17 March 2002.

Genetic dissection of a modern sugarcane cultivar (Saccharum spp.). II. Detection of QTLs for yield components. Hoarau Jean-Yves, Grivet Laurent, Offmann Bernard Gilles, Raboin Louis-Marie, Diorflar J.P., Payet Jacques, Hellmann Michel, D'Hont Angélique, Glaszmann Jean-Christophe. 2002. Theoretical and Applied Genetics, 105 : pp. 1027-1037.

Genetic diversity and population dynamics of weedy rice in France. Bres-Patry Cécile, Bangratz Martine, Ghesquière Alain. 2002. In : Rice genetic resources and breeding for Europe and other temperate areas : proceedings of Eurorice 2001 Symposium, Cirad, Ird, Ksau, Krasnodar Territory, Vniirisa, September, 3-8, 2001, Krasnodar, Russia. CIRAD, IRD, KSAU, Krasnodar. Montpellier : CIRAD ISBN 2-87614-504-9 Eurorice 2001 Symposium, Krasnodar, Russie, 3 September 2001/8 September 2001.

Highlights on pathogenic BSV EPRVs in Musa breeding programs. Lheureux Fabrice, Carreel Françoise, Jenny Christophe, Laboureau Nathalie, Lockhart Benham E.L., Caruana Marie-Line. 2002. In : 3nd International Symposium on the Molecular and Cellular Biology of Bananas, Belgique, Leuven, 09-11 September 2002. s.l. : s.n., Résumé, 1 p. International Symposium on the Molecular and Cellular Biology of Bananas. 3, Louvain, Belgique, 9 September 2002/11 September 2002.

Is DNA methylation underlying somaclonal variation in oil palm? Rival Alain, Jaligot Estelle, Laroche A., Beulé Thierry, Oakeley E.J., Verdeil Jean-Luc, Tregear James. 2002. In : Proceedings of the International Symposium on Tropical and Subtropical Fruits. Drew R.A. (ed.). ISHS. Wageningen : ISHS, pp. 47-59. (Acta Horticulturae, 575) ISBN 90-6605-885-4 International Symposium on Tropical and Subtropical Fruits, Cairns, Australie, 26 November 2000/1 December 2000.

Le riz au Cirad. CIRAD-CA-CALIM - FRA, CIRAD-TERA - FRA, CIRAD-EMVT - FRA, CIRAD-AMIS - FRA. 2002. Montpellier : CIRAD, 54 p.

Mapping genes for cotton fiber quality : Arabidopsis thaliana as a source of candidate genes. Giband Marc, Nguyen Trung-Bieu, Lacape Jean-Marc. 2002. Cotton Science, 14suppl. : p. 57. International Cotton Genome Initiative Workshop. 3, Nanjing, Chine, 3 June 2002/6 June 2002.

Molecular genetics at CIRAD-CA : example of a marker-assisted selection for fibre quality. Lacape Jean-Marc, Nguyen Trung-Bieu, Hau Bernard. 2002. In : Sustainable development of cotton production in South-East Asia: constraints and perspectives : Proceedings of the second South-East Asian cotton research consortium meeting, Ho Chi Minh City, November 20-22, 2001, Vietnam. Michel Bruno (ed.). DORAS, VCC, SEACRC. s.l. : s.n., pp. 87-91. South-East Asian Cotton Research Consortium Meeting. 2, Ho Chi Minh City, Viet Nam, 20 November 2001/22 November 2001.

Proposal for the creation of an "International working group on cocoa genome studies". Eskes Albertus. 2002. Ingenic Newsletter (7) : pp. 35-36.

QTL for agronomic traits in Theobroma cacao L. Clément Didier, Risterucci Ange-Marie, Glaszmann Jean-Christophe, Lanaud Claire. 2002. In : Plant, Animal and Microbe Genomes 10th Conference, January 12 - 16, 2002, San Diego, California. s.l. : s.n., 1 p. Plant, Animal and Microbe Genomes Conference. 10, San Diego, États-Unis, 12 January 2002/16 January 2002.

Quantitative trait loci for agronomic traits in several progenitors of Theobroma cacao L. Clément Didier, Risterucci Ange-Marie, Lanaud Claire. 2002. In : Plant, Animal and Microbe Genomes 10th Conference. Abstracts. New York : Scherago International Plant, Animal and Microbe Genomes Conference. 10, San Diego, États-Unis, 12 January 2002/16 January 2002.

Rapport annuel 2001 : canne à sucre. CIRAD-CA-Canne à sucre - FRA. 2002. Montpellier : CIRAD-CA, 83 p. ISBN 2-87614-481-6

Sugarcane genomics : depicting the complex genome of an important tropical crop. Grivet Laurent, Arruda Paulo. 2002. Current Opinion in Plant Biology, 5 (2) : pp. 122-127.
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Use of gene transfer for varietal improvement and functional genomics of rice: Results and prospects. Guiderdoni Emmanuel. 2002. In : Rice genetic resources and breeding for Europe and other temperate areas : proceedings of Eurorice 2001 Symposium, Cirad, Ird, Ksau, Krasnodar Territory, Vniirisa, September, 3-8, 2001, Krasnodar, Russia. CIRAD, IRD, KSAU, Krasnodar. Montpellier : CIRAD, Résumé ISBN 2-87614-504-9 Eurorice 2001 Symposium, Krasnodar, Russie, 3 September 2001/8 September 2001.

What comes next after the genome sequencing. Demaille Jacques. 2002. In : Second international symposium on Candidate Genes for Animal Health (C.G.A.H), Montpellier, France, August 16-18th 2002 : abstracts. CIRAD, INRA. Montpellier : CIRAD, Résumé, 1 p. International Symposium on Candidate Genes for Animal Health. 2, Montpellier, France, 16 August 2002/18 August 2002.

An integrated physical and genetic map of the rice genome. Chen Mingsheng, Presting Gernot, Barbazuk W. Brad, Goicoechea Jose Luis, Blackmon Barbara, Fang Guangchen, Kim Hyeran, Frisch David, Yu Yeisoo, Sun Shouhong, Higingbottom Stéphanie, Phimphilai John, Phimphilai Dao, Thurmond Scheen, Li Ping, Liu Jingdong, Hatfield Jamie, Main Dorrie, Farrar Kasey, Henderson Caroline, Barnett Laura, Costa Ravi, Williams Brian, Walser Suzanne, Atkins Michael, Hall Caroline, Budiman Muhammad A., Tomkins Jeffery P., Luo Meizhong, Bancroft Ian, Salse Jérôme, Regad Farid, Mohapatra Trilochan, Singh Nagendra K., Tyagi Akhilesh K., Soderlund Carol, Dean Ralph A., Wing Rod A.. 2002. Plant Cell, 14 : pp. 537-545.

A reference map of Cucumis melo based on two recombinant inbred line populations. Perin Christophe, Hagen L.S., De Conto V., Katzir Nurit, Danin-Poleg Y., Portnoy Vitali, Baudracco-Arnas S., Chadoeuf Joël, Dogimont Catherine, Pitrat Michel. 2002. Theoretical and Applied Genetics, 104 : pp. 1017-1034.
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2001

Cocoa. Eskes Albertus, Lanaud Claire. 2001. In : Tropical plant breeding. Charrier André (ed.), Jacquot Michel (ed.), Hamon Serge (ed.), Nicolas Dominique (ed.). Montpellier : CIRAD, pp. 78-105. (Repères) ISBN 2-87614-426-3
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Compte-rendu de congrès Eureopean Science Foundation workshop on the assessment of the impact of genetically modified plants (ESF-AIGM) : potential environmental impacts associated with virus-resistant transgenic plants. Versailles, 5 et 6 juin 2001. Teycheney Pierre-Yves. 2001. Montpellier : CIRAD, 4 p. Potential Environmental Impacts Assosied With Virus-Resistant Transgenic Plants, Versailles, France, 5 June 2001/6 June 2001.

Evidence that the proliferation stage of micropropagation procedure is determinant in the expression of Banana streak virus integrated into the genome of the FHIA 21 hybrid (Musa AAAB). Dallot Sylvie, Acuna Pablo, Rivera Carmen, Ramirez Pilar, Côte François-Xavier, Lockhart Benham E.L., Caruana Marie-Line. 2001. Archives of Virology, 146 (11) : pp. 2179-2190.

Exploration du génome de la canne à sucre par séquençage d'EST. Grivet Laurent. 2001. In : Le Cirad au Brésil : rapport d'activités 2000. CIRAD. Brasilia : CIRAD, pp. 18-19.
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Exploração do genoma da cana-de-açucar por sequenciamento d'EST. Grivet Laurent. 2001. In : O Cirad no Brasil : relatorio de atividades 2000. CIRAD. Brasilia : CIRAD, pp. 18-19.
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Implications of new insight into the genetic structure of Theobroma cacao L. for breeding strategies. Lanaud Claire, Motamayor Juan Carlos, Risterucci Ange-Marie. 2001. In : Proceedings of the International workshop on new technologies and cocoa breeding. Bekele Frances L. (ed.), End Michelle (ed.), Eskes Albertus (ed.). INGENIC. Reading : INGENIC, pp. 89-107. ISBN 1-900527-02-2 International Workshop on New Technologies and Cocoa Breeding. 3, Kota Kinabalu, Malaisie, 16 October 2000/17 October 2000.
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Oil palm biotechnology: progress and prospects. Rival Alain, Tregear James, Jaligot Estelle, Morcillo Fabienne, Aberlenc Frédérique, Billotte Norbert, Richaud Frédérique, Beulé Thierry, Borgel Alain, Duval Yves. 2001. OCL. Oléagineux Corps gras Lipides, 8 (4) : pp. 295-306.
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Participation au 6ème atelier de travail en amélioration variétale de l'ISSCT Barbade : rapport de mission du 13 au 17 novembre 2000. Oriol Philippe, D'Hont Angélique, Feldmann Philippe, Paulet Florence, Raboin Louis-Marie, Roques Danièle, Rott Philippe. 2001. Montpellier : CIRAD-CA, 35 p. ISSCT Breeding Workshop. 6, Bridgetown, Barbade, 13 November 2000/17 November 2000.
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Préparation au séquencage du chromosome 12 du riz. Regad Farid, Salses J., Cooke Richard, Presting Gernot, Lagoda Pierre, Delseny Michel. 2001. In : Des modèles biologiques à l'amélioration des plantes. Hamon Serge (ed.). AUF. Paris : IRD, p. 580. (Colloques et séminaires / IRD) ISBN 2-7099-1472-7 Journées scientifiques du réseau AUF "Biotechnologies végétales : amélioration des plantes et sécurité alimentaire". 7, Montpellier, France, 3 July 2000/5 July 2000.
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Quantitative trait loci for yield and yield components in an Oryza sativa x Oryza rufipogon BC2F2 population evaluated in an upland environment. Moncada P., Martinez C.P., Borrero Jaime, Châtel Marc, Gauch H., Guimaraes Elcio Perpetuo, Tohmé Joe, McCouch S.R.. 2001. Theoretical and Applied Genetics, 102 : pp. 41-52.

RFLP mapping of QTLs for photoperiod response in tropical sorghum. Chantereau Jacques, Trouche Gilles, Rami Jean-François, Deu Monique, Barro Clarisse, Grivet Laurent. 2001. Euphytica, 120 : pp. 183-194.

Rapport annuel 2000 : canne à sucre. CIRAD-CA-Canne à sucre - FRA. 2001. Montpellier : CIRAD-CA, 78 p. ISBN 2-87614-481-6

Rapport de mission en pathologie de la canne à sucre au Brésil du 11 au 20 mars 2001. Costet Laurent, Rott Philippe. 2001. Montpellier : CIRAD-CA, 26 p.
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Sequence polymorphism from EST data in surgarcane : a fine analysis of 6-phosphogluconate dehydrogenase genes. Grivet Laurent, Glaszmann Jean-Christophe, Arruda Paulo. 2001. Genetics and Molecular Biology, 24 (1-4) : pp. 161-167.
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A sugarcane genetic database. Raboin Louis-Marie, D'Hont Angélique. 2001. Proceedings of the Annual Congress of the South African Sugar Technologists' Association, 75 : p. 252. Annual Congress of the South African Sugar Technologists' Association (SASTA). 75, Durban, Afrique du Sud, 31 July 2001/3 August 2001.

The sugarcane genome: a synthesis of current understanding, and lessons for breeding and biotechnology. Butterfield M.K., D'Hont Angélique, Berding Nils. 2001. Proceedings of the Annual Congress of the South African Sugar Technologists' Association, 75 : pp. 1-5. Annual Congress of the South African Sugar Technologists' Association (SASTA). 75, Durban, Afrique du Sud, 31 July 2001/3 August 2001.

2000

Annual report 1999 : sugarcane. CIRAD-CA-Canne à sucre - FRA. 2000. Montpellier : CIRAD-CA, 84 p. ISBN 2-87614-424-7

Cartographie du génome de Theobroma cacao L. et localisation de QTLs codant pour la résistance à la pourriture des cabosses causée par Phytophthora palmivora à Trinidad. Sounigo Olivier, Motilal Lambert A., Thévenin Jean-Marc, Howell M.H., Pieretti Isabelle, Risterucci Ange-Marie, Lanaud Claire. 2000. In : Bases génétiques de la résistance des cacaoyers aux maladies à #Phytophthora# : Résumés des communications = Genetic basis of cocoa tree resistance to Phytophthora diseases. Abstracts. Cilas Christian (ed.). CIRAD, CAOBISCO, CNRA, UWI-CRU, IRAD. Montpellier : CIRAD, pp. 30-31. Scientific Closing Seminar of CAOBISCO / CIRAD / CNRA / CRU / IRAD Project, Montpellier, France, 19 September 2000/20 September 2000.

Compte rendu du sixième congrès international de biologie moléculaire des plantes, ISPMB, du 18 au 24 juin 2000, Québec. Montoro Pascal, Pujade-Renaud Valérie. 2000. Montpellier : CIRAD-CP, 51 p. N° de rapport : CP_SIC 1281
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DNA methylation and somaclonal variation in oil palm. Rival Alain, Jaligot Estelle, Beulé Thierry, Verdeil Jean-Luc, Tregear James. 2000. In : Proceedings of the international symposium on methods and markers for quality assurance in micropropagation. Cassells A.C. (ed.), Doyle B.M. (ed.), Curry R.F. (ed.). ISHS. Leuven : ISHS, pp. 447-454. (Acta Horticulturae, 530) ISBN 90-660-5992-3 International Symposium on Methods and Markers for Quality Assurance in Micropropagation, Cork, Irlande, 24 August 1999/27 August 1999.

DNA methylation is involed in somaclonal variation in oil palm. Jaligot Estelle, Rival Alain, Beulé Thierry, Verdeil Jean-Luc, Oakeley E.J.. 2000. In : Sixth International Congress of Plant Molecular Biology. ISPMB. Montpellier : CIRAD-CP, 1 p. International Congress of Plant Molecular Biology. 6, Québec, Canada, 18 June 2000/24 June 2000.
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Molecular breeding in coffee (Coffea arabica L.). Lashermes Philippe, Combes Marie-Christine, Topart Patrick, Graziosi Giorgio, Bertrand Benoît, Anthony François. 2000. In : Coffee biotechnology and quality : proceedings of the 3rd international seminar on biotechnology in the coffee agro-industry, Londrina, Brazil. Sera T. (ed.), Soccol Carlos Ricardo (ed.), Pandey Ashok (ed.), Roussos S. (ed.). IAPAR, IRD, UFPR. Dordrecht : Kluwer Academic Publishers, pp. 101-112. ISBN 0-7923-6582-8 International Seminar on Biotechnology in the Coffee Agroindustry. 3, Londrina, Brésil, 24 May 1999/28 May 1999.

Monsanto et le génome du riz : un cadeau empoisonné. Weil Alain. 2000. Le Courrier de l'Environnement de l'INRA (41) : pp. 87-90.
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Rapport annuel 1999 : canne à sucre. CIRAD-CA-Canne à sucre - FRA. 2000. Montpellier : CIRAD-CA, 84 p. ISBN 2-87614-423-9

Rapport de mission en Australie. Camberra du 13 au 20 février 2000. Giband Marc. 2000. Montpellier : CIRAD-CA, 14 p.

Recherche de marqueurs moléculaires AFLP et microsatellites du gène Sh chez le palmier à huile par analyse BSA (Bulked Segregant Analysis) et cartographie génétique. Frances Lisa. 2000. Toulouse : Université de Toulouse III, 40 p. Mémoire DUR (Diplôme universitaire de responsable) : Biotechnologies végétales : Université Paul Sabatier

Ressources génétiques : apport de l'hybridation somatique pour l'exploitation des ressources génétiques des agrumes. Ollitrault Patrick, Dambier Dominique, Froelicher Y., Carreel Françoise, D'Hont Angélique, Luro François, Bruyère Saturnin, Cabasson Cécile, Lotfy Samia, Joumaa Ali, Vanel Fanny, Maddi Franck, Treanton Karine, Grisoni Michel. 2000. Cahiers Agricultures, 9 (3) : pp. 223-236.
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Somaclonal variation in oil palm (Elaeis guineensis Jacq.): the DNA methylation hypothesis. Jaligot Estelle, Rival Alain, Beulé Thierry, Dussert Stéphane, Verdeil Jean-Luc. 2000. Plant Cell Reports, 19 (7) : pp. 684-690.

Structure de la population de Phytophthora pathogène des agrumes en plaine orientale Corse. Cohen S., Bisror M., Venard Paul, Vernière Christian, Panabiere F.. 2000. In : Journées Jean Chevaugeon : Rencontres de mycologie-phytopathologie. INRA, SFP, CIRAD, CNRS. Montpellier : CIRAD, 1 p. Journées Jean Chevaugeon, Rencontres de mycologie-phytopathologie, Aussois, France, 5 March 2000/9 March 2000.

Séquençage génomique et comparatif du riz. Lagoda Pierre. 2000. In : IXèmes Entretiens d'Agropolis : apport des outils biotechnologiques à l'amélioration variétale des plantes méditerranéennes et tropicales. Lundi 22 mai 2000, Montpellier. Agropolis. Montpellier : Agropolis, Résumé, p. 20. Entretiens d'Agropolis : Apport des outils biotechnologiques à l'amélioration variétale des plantes méditerranéennes et tropicales. 9, Montpellier, France, 22 May 2000.

The interspecific genome structure of cultivated banana, Musa sp. revealed by genomic DNA in situ hybridization. D'Hont Angélique, Paget Goy A., Escoute Jacques, Carreel Françoise. 2000. Theoretical and Applied Genetics, 100 : pp. 177-183.

1999

Annual report 1998 : sugarcane. CIRAD-CA-Canne à sucre - FRA. 1999. Montpellier : CIRAD-CA, 84 p. ISBN 2-87614-370-4

Aspects biologiques et moléculaires du virus de la peste des petits ruminants. Haffar Athman, Minet Cécile, Barbron Monique, Grillet Colette, Libeau Geneviève, Diallo Adama. 1999. Annales de Médecine Vétérinaire, 143 : pp. 393-402.

Biotechnology applied to the characterisation of the banana germplasm. Carreel Françoise, Jenny Christophe, D'Hont Angélique, Raboin Louis-Marie, Lagoda Pierre, Bakry Frédéric. 1999. In : The International symposium on the molecular and cellular biology of banana. Boyce Thompson Institute for Plant Research. New York : Boyce Thompson Institute for Plant Research, p. 44. International Symposium on the Molecular and Cellular Biology of Banana, Ithaca, États-Unis, 22 March 1999/25 March 1999.

DNA methylation and somaclonal variation in oil palm. Rival Alain, Jaligot Estelle, Beulé Thierry, Verdeil Jean-Luc, Tregear James. 1999. In : Abstracts of the ISHS conference on "Methods and markers for quality assurance in micropropagation". Doyle B.M. (ed.), Curry R.F. (ed.), Cassells A.C. (ed.); ISHS. Cork : National University of Ireland, pp. 94-95. International Symposium on Methods and Markers for Quality Assurance in Micropropagation, Cork, Irlande, 24 August 1999/27 August 1999.

Developing near-isogenic lines of IR64 introgressed with QTLs for deeper and thicker roots through marker-aided selection. Shen L., Courtois Brigitte, McNally K., McCouch Susan, Li Z.. 1999. In : Genetic improvement of rice for water-limited environments. Ito O. (ed.), O'Toole J. (ed.), Hardy Bill (ed.). IRRI. Los Banos : IRRI, pp. 275-289. ISBN 971-220-138-4 Workshop on Genetic Improvement of Rice for Water-Limited Environments, Los Banos, Philippines, 1 December 1998/3 December 1998.

Developments in the field of biotechnology and their applications to oil palm breeding. Meunier Jacques. 1999. In : Proceedings of the Symposium on the Science of Oil Palm Breeding, 30 June 1992 - 2 July 1992, Montpellier, France. Rajanaidu Nookiah (ed.), Jalani B.S. (ed.). ISOPB, PORIM, CIRAD-IRHO. Kuala Lumpur : PORIM, pp. 1-7. ISBN 9679610799 Symposium on the Science of Oil Palm Breeding, Montpellier, France, 30 June 1992/2 July 1992.

Etude de la structure du génome des bananiers cultivés (Musa spp.) à l'aide de la cytométrie en flux, de l'hybridation in situ d'ADN génomique et de l'analyse de séquences répétées. D'Hont Angélique, Paget Goy A., Jenny Christophe, Noyer Jean-Louis, Baurens Franc-Christophe, Lagoda Pierre, Carreel Françoise. 1999. Infomusa (Ed. Française), 8 (1) : p. 5. International Symposium on the Molecular and Cellular Biology of Banana, Ithaca, États-Unis, 22 March 1999/25 March 1999.

Flow cytometric analysis of nuclear DNA content in Musa. Lysak M.A., Dolezelova M., Horry Jean-Pierre, Swennen Rony, Dolezel Jaroslav. 1999. Theoretical and Applied Genetics, 98 (8) : pp. 1344-1350.

Genetic mapping of favorable traits in sugarcane cultivars. D'Hont Angélique, Grivet Laurent, Hoarau Jean-Yves, Paulet Florence, Asnaghi Carole, Kaye Claudia, Jannoo Nazeema, Alix Karine, Offmann Bernard Gilles, Girard Jean-Claude, Raboin Louis-Marie, Rott Philippe, Glaszmann Jean-Christophe. 1999. In : Proceedings of the XXIII ISSCT Congress : 22-26 February 1999, New Delhi, India. Singh V. (ed.), Kumar Vinay (ed.). ISSCT. New Delhi : Sugar Technologists' Association of India, pp. 273-276. ISBN 81-85871-30-2 ISSCT Congress. 23, New Delhi, Inde, 22 February 1999/26 February 1999.

Genome analysis of sugarcane cultivar R570 (Saccharum spp) by AFLP in order to mark favorable traits. Hoarau Jean-Yves, Offmann Bernard Gilles, Grivet Laurent, Payet Jacques, D'Hont Angélique, Glaszmann Jean-Christophe. 1999. . s.l. : s.n., Résumé Plant and Animal Genomes Conference. 7, San Diego, États-Unis, 17 January 1999/21 January 1999.

Investigation of the complex genome structure of cultivated banana (Musa spp.) by flow cytometry, genomic DNA in situ hybridisation and repeated sequence analysis. D'Hont Angélique, Paget Goy A., Jenny Christophe, Noyer Jean-Louis, Baurens Franc-Christophe, Lagoda Pierre, Carreel Françoise. 1999. In : The International symposium on the molecular and cellular biology of banana. Boyce Thompson Institute for Plant Research. New York : Boyce Thompson Institute for Plant Research, p. 9. International Symposium on the Molecular and Cellular Biology of Banana, Ithaca, États-Unis, 22 March 1999/25 March 1999.

L'hévéa. Seguin Marc, Flori Albert, Legnaté Hyacinthe, Clément-Demange André. 1999. In : Diversité génétique des plantes tropicales cultivées = Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 241-269. ISBN 2-87614-344-8
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La connaissance et l'exploitation du génome pour les pays du Sud. Weil Alain. 1999. OCL. Oléagineux Corps gras Lipides, 6 (2) : pp. 160-165.
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La variation somaclonale "mantled" chez le palmier à huile (Elaeis guineensis Jacq.) : étude de la méthylation de l'ADN génomique. Jaligot Estelle. 1999. Montpellier : Université de Montpellier 2, 31 p. Mémoire DEA : Bases de la production végétale : Université des sciences et techniques du Languedoc

Le cacaoyer. Lanaud Claire, Motamayor Juan Carlos, Sounigo Olivier. 1999. In : Diversité génétique des plantes tropicales cultivées = Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 141-173. ISBN 2-87614-344-8
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Le riz asiatique. Glaszmann Jean-Christophe, Grivet Laurent, Courtois Brigitte, Noyer Jean-Louis, Luce Claude, Jacquot Michel, Albar Laurence, Ghesquière Alain, Second Gérard. 1999. In : Diversité génétique des plantes tropicales cultivées = Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 327-350. ISBN 2-87614-344-8
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Les agrumes. Ollitrault Patrick, Jacquemond Camille, Dubois Cécile, Luro François. 1999. In : Diversité génétique des plantes tropicales cultivées = Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 89-111. ISBN 2-87614-344-8
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Les bananiers. Jenny Christophe, Carreel Françoise, Tomekpé Kodjo, Perrier Xavier, Dubois Cécile, Horry Jean-Pierre, Tézenas Du Montcel Hugues. 1999. In : Diversité génétique des plantes tropicales cultivées = Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 113-139. ISBN 2-87614-344-8
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Les méthodes de marquage biochimique et moléculaire. Grivet Laurent, Noyer Jean-Louis. 1999. In : Diversité génétique des plantes tropicales cultivées = Genetic diversity of cultivated tropical plants. Hamon Perla (ed.), Seguin Marc (ed.), Perrier Xavier (ed.), Glaszmann Jean-Christophe (ed.). Montpellier : CIRAD, pp. 13-41. ISBN 2-87614-344-8
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Notice de travaux présentée pour obtenir le diplôme de : Habilitation à diriger les recherches en sciences de l'Université Paris XI Orsay. Guiderdoni Emmanuel. 1999. Orsay : Université de Paris-Sud, 2 vol. (61-[350] p.). Habilitation à diriger des recherches : Sciences : Université de Paris-Sud

Productivité et qualité des grains de sorgho pour le tô en Afrique de l'Ouest : les nouvelles voies d'amélioration. Trouche Gilles, Fliedel Geneviève, Chantereau Jacques, Barro Clarisse. 1999. Agriculture et Développement (23) : pp. 94-107.
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Rapport annuel 1998 : canne à sucre. CIRAD-CA-Canne à sucre - FRA. 1999. Montpellier : CIRAD, 84 p. ISBN 2-87614-366-6

Signalling pathways and DNA methylation vs. somaclonal variation in embryogenic in vitro cultures of oil palm. Rival Alain, Nato Aimé, Jaligot Estelle, Lavergne Danielle, Verdeil Jean-Luc, Tregear James. 1999. In : FEBS'99, 26th Meeting of the Federation of European Biochemical Societies, Nice, France, 19-24th June 1999. - Montpellier : CIRAD-CP, 1999. s.l. : s.n., 1 p. Meeting of the Federation of European Biochemical Societies (FEBS'99). 26, Nice, France, 19 June 1999/24 June 1999.

Towards a saturated sorghum map using RFLP and AFLP markers. Boivin Karine, Deu Monique, Rami Jean-François, Trouche Gilles, Hamon Perla. 1999. Theoretical and Applied Genetics, 98 : pp. 320-328.

The interspecific genome structure of cultivated banana, Musa spp. revealed by flow cytometry and genomic DNA in situ hybridisation. D'Hont Angélique, Paget Goy A., Jenny Christophe, Escoute Jacques, Layssac Marion, Glaszmann Jean-Christophe, Carreel Françoise. 1999. In : The international conference on the status of plant and animal genome research : Poster abstracts. Shearago International. New York : Scherago International, p. 86. Plant and Animal Genomes Conference. 7, San Diego, États-Unis, 17 January 1999/21 January 1999.

The study of the Musaceae : mapping and genomics. Lagoda Pierre, Baurens Franc-Christophe, Raboin Louis-Marie, Noyer Jean-Louis. 1999. In : The International symposium on the molecular and cellular biology of banana. Boyce Thompson Institute for Plant Research. New York : Boyce Thompson Institute for Plant Research, p. 6. International Symposium on the Molecular and Cellular Biology of Banana, Ithaca, États-Unis, 22 March 1999/25 March 1999.

1998

Canne à sucre : recherche fondamentale et développement agricole. Guillaume Patrice. 1998. In : Journée canne à sucre. Recueil des communications. AMADEPA, CTCS, Chambre d'agriculture de la Martinique. Le Lamentin : AMADEPA, pp. 8-11. Journée canne à sucre, Le Lamentin, Martinique, 9 July 1998.

Compte rendu de mission : Portugal, du 29 juin au 5 juillet 1998. Duval Marie-France. 1998. Montpellier : CIRAD-FLHOR, 10 p.

Cooperation in plant genomics at CIRAD. CIRAD-DG-Direction générale - FRA. 1998. Montpellier : CIRAD, 82 p. ISBN 2-87614-324-0
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Development and use of SCAR (sequence characterized amplified regions) to analyse populations of Magnaporthe grisea. Soubabère Olivier, Tharreau Didier, Dioh Waly, Lebrun Marc-Henri, Nottéghem Jean-Loup. 1998. In : ICPP98. Offered papers. Abstracts (themes 3, 4, 5 and miscellaneous). BSPP; ISPP. Birmingham : BSPP, p. 6. International Congress of Plant Pathology. 7, Edimbourg, Royaume-Uni, 9 August 1998/16 August 1998.

Estimation of nuclear DNA content in oil palm tissue cultures and seed derived plants. Rival Alain, Beulé Thierry, Noirot Michel. 1998. In : Société Française de Cytométrie. 5, Toulouse, France, 06-10 octobre 1988. Montpellier : CIRAD-CP, 1 p. Société française de cytométrie. 5, Toulouse, France, 6 October 1998/10 October 1998.

Etude de la diversité génétique du genre Elaeis (E. oleifera (Kunth) Cortés et E. guineensis Jacq.) par marqueurs moléculaires (RFLP et AFLP). Barcelos Edson. 1998. Montpellier : ENSAM, 159 p. Thèse de doctorat : Sciences Agronomiques. Amélioration des plantes : Ecole nationale supérieure agronomique de Montpellier

Genome mapping and genetic analysis of South American Leaf Blight resistance in rubber tree (Hevea brasiliensis). Seguin Marc, Lespinasse Denis, Rodier-Goud Marguerite, Legnaté Hyacinthe, Troispoux Valérie, Pinard Fabrice, Clément-Demange André. 1998. In : Proceedings of the third Asia-Pacific conference on agricultural biotechnology: Issues and choices = [Comptes-rendus de la troisième conférence Asie-Pacifique sur la biotechnologie en agriculture : résultats et choix]. BIOTEC. Bangkok : National Center for Genetic Engineering and Biotechnology, pp. 1-8. Asia-Pacific Conference on Agricultural Biotechnology. 3, Hua Hin, Thaïlande, 10 November 1996/15 November 1996.

Global DNA methylation rates and somaclonal variation in oil palm. Rival Alain, Jaligot Estelle, Beulé Thierry, Verdeil Jean-Luc, Tregear James. 1998. In : Curie Workshop on Epigenetics and DNA Methylation. Montpellier : CIRAD-CP, 1 p. Curie workshop on epigenetics and DNA methylation, Paris, France, 23 September 1998/26 September 1998.

La méthylation de l'ADN génomique chez les plantes. Mécanismes et rôles biologiques. Rival Alain. 1998. In : Séminaire UPRESA-CNRS sur les Signaux et Régulations lors du Développement chez les Végétaux. Montpellier : CIRAD-CP, 1 p. Séminaire UPRESA-CNRS sur les signaux et régulations lors du développement chez les végétaux, Rouen, France, 27 November 1998.

La structure complexe des génomes eucaryotes. Lagoda Pierre. 1998. In : Cycles de Conférences "Les Chercheurs Luxembourgeois à l'Etranger". Luxembourg : MNHN, 1 p. Cycles de conférences "les chercheurs luxembourgeois à l'etranger", Luxembourg, Luxembourg, 4 November 1997/5 December 1997.

Les séquences répétées de la canne à sucre : spécificités génomiques et apport aux programmes d'introgression. Alix Karine. 1998. Rennes : ENSAR, 156 p. Thèse de doctorat : Biologie et agronomie : Ecole nationale supérieure agronomique de Rennes

Molecular search for mRNA and genomic markers of the oil palm "mantled" somaclonal variation. Rival Alain, Tregear James, Verdeil Jean-Luc, Richaud Frédérique, Beulé Thierry, Duval Yves, Hartmann Caroline, Rode A.. 1998. In : Proceedings of the First International symposium on biotechnology of tropical and subtropical species, Brisbane, Queensland, Australia, September 29-October 3, 1997. Part 2. Drew R.A. (ed.). ISHS. Louvain : ISHS [Belgique], pp. 165-171. (Acta Horticulturae, 461) ISBN 978-90-66058-90-3 International Symposium on Biotechnology of Tropical and Subtropical Species. 1, Brisbane, Australie, 29 September 1997/3 October 1997.

PCR-RFLP analysis of the hrp genes of Ralstonia solanacearium, agent of bacterial wilt. Poussier Stéphane, Vandewalle P., Luisetti Jacques. 1998. In : ICPP98. Offered papers. Abstracts (themes 1 and 2). BSPP, ISPP. Birmingham : BSPP, p. 44. International Congress of Plant Pathology. 7, Edimbourg, Royaume-Uni, 9 August 1998/16 August 1998.

Progress in sugar cane genome analysis. D'Hont Angélique, Grivet Laurent, Asnaghi Carole, Paulet Florence, Roques Danièle, Jannoo Nazeema, Alix Karine, Piperidis George, Girard Jean-Claude, Daugrois Jean-Heinrich, Feldmann Philippe, Glaszmann Jean-Christophe. 1998. In : Efficiency of sugar cane breeding. Abstracts. MSIRI; ISSCT. Réduit : MSIRI, Résumé, p. 32. ISSCT Breeding and Germplasm Workshop. 4, Réduit, Maurice, 18 May 1998/22 May 1998.

Results of a Musa mapping project. Lagoda Pierre, Noyer Jean-Louis, Baurens Franc-Christophe, Grivet Laurent, Raboin Louis-Marie, Amson C., Aubert Georges, Costet Laurent, Lanaud Claire, Dambier Dominique, Ganry Jacky, Tézenas Du Montcel Hugues, Horry Jean-Pierre, Bakry Frédéric, Ollitrault Patrick, Carreel Françoise, Auboiron Erik, Fouré Eric, Jenny Christophe, Tomekpé Kodjo, Grapin Agnès, Faure A.S., Reschoeur F., Gonzales De Léon D.. 1998. In : Use of novel DNA fingerprinting techniques for the detection and characterization of genetic variation in vegetatively propagated crops. Proceedings. IAEA ; FAO. Vienna : IAEA, pp. 35-43. (IAEA, 1047) FAO/IAEA Final Research Co-ordination Meeting, Mumbai, Inde, 24 February 1997/28 February 1997.

Structure et dynamique du génome des cultivars modernes de canne à sucre (Saccharum spp) ; apports du marquage moléculaire (RFLP). Jannoo Nazeema. 1998. Paris : INA-PG, 105 p. Thèse de doctorat : Institut national agronomique Paris-Grignon

Sugarcane genome analysis by DNA in situ hybridization. D'Hont Angélique, Ison David, Chong Julie, Jannoo Nazeema, Piperidis George, Alix Karine, Glaszmann Jean-Christophe. 1998. . s.l. : s.n., Résumé Plant and Animal Genomes Conference. 6, San Diego, États-Unis, 18 January 1998/22 January 1998.

Towards a perennial upland and rice. McNally Kenneth L., Schmit Véronique, Courtois Brigitte. 1998. . s.l. : s.n., Résumé Plant and Animal Genomes Conference. 6, San Diego, États-Unis, 18 January 1998/22 January 1998.

The genome of modern sugarcane varieties. Glaszmann Jean-Christophe, D'Hont Angélique, Feldmann Philippe. 1998. In : Some insights into biotechnologicals issues and reports on variety development. Anon. s.l. : s.n., pp. 4-14. World Meeting of the Directors of Sugarcane Research Centers. 1, Guatemala City, Guatemala, 19 July 1998/25 July 1998.

The mantled floral variation in oil palm clones: hormonal and molecular approaches. Verdeil Jean-Luc, Rival Alain, Tregear James, Besse I., Maldiney R., Beulé Thierry, Richaud Frédérique, Duval Yves, Miginiac E.. 1998. In : Workshop on Advances on Somatic Embryogenesis in Forest Trees, EU-COST EUROSILVA. Montpellier : CIRAD-CP, 1 p. Workshop on advances on somatic embryogenesis in forest trees, Orléans, France, 2 December 1998/4 December 1998.

A satellite DNA family in the Saccharum complex. Alix Karine, Baurens Franc-Christophe, Glaszmann Jean-Christophe, D'Hont Angélique. 1998. . s.l. : s.n., Résumé Plant and Animal Genomes Conference. 6, San Diego, États-Unis, 18 January 1998/22 January 1998.

1997

Comparative genome analysis between several tropical grasses. Glaszmann Jean-Christophe, Dufour Philippe, Grivet Laurent, D'Hont Angélique, Deu Monique, Paulet Florence, Hamon Perla. 1997. Euphytica, 96 : pp. 13-21.

Compte-rendu de la réunion générale du programme international sur les biotechnologies du riz de la Fondation Rockfeller. Malacca-Malaisie, 15-19 septembre 1997. Guiderdoni Emmanuel, Breitler Jean-Christophe. 1997. Montpellier : CIRAD-CA, 9 p. Réunion générale du programme international sur les biotechnologies du riz de la fondation Rockfeller, Malacca, Malaisie, 15 September 1997/19 September 1997.

Contribution à l'analyse du génome de la canne à sucre par hybridation in situ. Ison David. 1997. s.l. : s.n., 45 p. Mémoire DAA : Sciences et techniques des productions végétales : Ecole nationale supérieure agronomique de Rennes

Identification de locus intervenant dans l'expression de caractères quantitatifs au CIRAD pour l'amélioration du sorgho. Dufour Philippe, Trouche Gilles, Fliedel Geneviève, Deu Monique, Rami Jean-François, Da Sansan, Chantereau Jacques, Glaszmann Jean-Christophe, Hamon Perla. 1997. In : Amélioration du sorgho et de sa culture en Afrique de l'Ouest et du Centre = Sorghum improvement in Western and Central Africa$ENG. Ratnadass Alain (ed.), Chantereau Jacques (ed.), Gigou Jacques (ed.). CIRAD, ICRISAT, CIRAD-CA, Programme conjoint sorgho ICRISAT-CIRAD. Montpellier : CIRAD, pp. 61-64. (Colloques) ISBN 2-87614-304-6 Atelier de restitution du programme conjoint sur le sorgho, Bamako, Mali, 17 March 1997/20 March 1997.
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Identification par PCR des espèces impliquées dans la composition génomique des cultivars des bananiers, à l'aide de séquences répétées. Baurens Franc-Christophe. 1997. Montpellier : CIRAD, 350 p. Thèse de doctorat : Sciences de la Vie et de la Santé : Université Paul Sabatier

Mapping avirulence genes in the rice blast fungus Magnaporthe grisea. Dioh Waly, Lebrun Marc-Henri, Tharreau Didier, Gomez R., Roumen E., Nottéghem Jean-Loup, Orbach M.. 1997. In : Maladies du riz en région méditerranéenne et les possibilités d'amélioration de sa résistance = Rice diseases in the Mediterranean region and breeding for resistance, 15-17 mai 1995, Montpellier, France. Montpellier : CIHEAM-IAMM, pp. 113-118. (Cahiers Options Méditerranéennes, 1022-1379, 15(3) Maladies du riz en région méditerranéenne et les possibilités d'amélioration de sa résistance, Montpellier, France, 15 May 1995/14 May 1995.

Molecular and cytological analysis of the "mantled" somaclonal variation in oil palm (Elaeis guineensis Jacq.). Rival Alain, Tregear James, Verdeil Jean-Luc, Beulé Thierry, Richaud Frédérique, Duval Yves. 1997. In : 5th International Congress of Plant Molecular Biology. ISPMB. Montpellier : CIRAD-CP, 1 p. International Congress of Plant Molecular Biology. 5, Singapour, Singapour, 21 September 1997/27 September 1997.

Molecular marker assisted analysis of the Musa genome complex. Ford Lloyd B.V., Kaemmer D., Kahl G., Lagoda Pierre. 1997. In : Annual report 1996 = [Rapport annuel 1996]. INIBAP. Montpellier : INIBAP, pp. 24-28.

Pourquoi des études génétiques sur la canne à sucre ? Girard Jean-Claude, Roques Danièle, Hoarau Jean-Yves, Payet Jacques. 1997. Magazine CIRAD Réunion (6) : pp. 6-7.

RAPD-based screening of genomic libraries for positional cloning. Dioh Waly, Tharreau Didier, Lebrun Marc-Henri. 1997. Nucleic Acids Research, 25 (24) : pp. 5130-5131.

Rapport annuel 1996 : filière canne à sucre. CIRAD-CA-Canne à sucre - FRA, CIRAD-Délégation de la Réunion - REU. 1997. Saint Denis : CIRAD, 80 p.

Utilisation des marqueurs RFLP et AFLP pour la cartographie génétique du sorgho (Sorghum bicolor L. Moench). Boivin Karine. 1997. Dijon : Université de Bourgogne, 31 p. Mémoire DSER (Diplôme supérieur d'étude et de recherche) : Université de Bourgogne

The genome of modern sugarcane varieties. Glaszmann Jean-Christophe, D'Hont Angélique, Feldmann Philippe. 1997. In : Medio siglo de investigaciones caneras en Cuba = Cinquantenaire de la recherche sur la canne à sucre à Cuba. INICA. Montpellier : CIRAD-CA, pp. 1-10. Medio Siglo de Investigaciones Caneras en Cuba, Jovellanos, Cuba, 23 June 1997/27 June 1997.

A saturated linkage map of Theobroma cacao. Risterucci Ange-Marie, Lanaud Claire, N'Goran Jeanne A.K., Pieretti Isabelle. 1997. In : Plant and Animal Genomes V Conference, January 12-16, 1997, San Diego, United States. Final program and abstracts guide. Washington : USDA, p. 138. Plant and Animal Genomes Conference. 5, San Diego, États-Unis, 12 January 1997/16 January 1997.

The saturated map of diploid banana (Musa acuminata). Noyer Jean-Louis, Dambier Dominique, Lanaud Claire, Lagoda Pierre. 1997. In : Plant and Animal Genomes V Conference, January 12-16, 1997, San Diego, United States. Final program and abstracts guide. Washington : USDA, p. 138. Plant and Animal Genomes Conference. 5, San Diego, États-Unis, 12 January 1997/16 January 1997.

1996

Biological, biochemical and molecular diversity of Radopholus similis. Sarah Jean-Louis, Fallas G.. 1996. In : New frontiers in resistance breeding for nematode, #Fusarium# and Sigatoka : Proceedings of the workshop, Kuala Lumpur, Malaysia, 2-5 October 1995. Frison Emile A. (ed.), Horry Jean-Pierre (ed.), De Waele Dirk (ed.). INIBAP, IPGRI, CIRAD-FLHOR, MARDI. Montpellier : INIBAP, pp. 50-51. ISBN 2-910810-07-0 New frontiers in resistance breeding for nematode, fusarium and sigatoka, Kuala Lumpur, Malaisie, 2 October 1995/5 October 1995.
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Caractérisation d'isolats du virus de la panachure jaune riz (RYMV) en Côte d'Ivoire. N'Guessan Koffi Placide, Fargette Denis, Sy A.A., Pinel A.. 1996. In : Première conférence internationale de virologie et de microbiologie. Société camerounaise de microbiologie, IUMS. Yaoundé : Société camerounaise de microbiologie, Résumé, p. 108. Conférence internationale de virologie et de microbiologie. 1, Yaoundé, Cameroun, 17 November 1996/23 November 1996.

Cartographie moléculaire du génome du sorgho (Sorghum bicolor L. Moench) : application en sélection variétale ; cartographie comparée chez les andropogonées. Dufour Philippe. 1996. Orsay : Université de Paris-Sud, 103 p. Thèse d'université : Université de Paris-Sud

Comparative genome analysis between several tropical grasses. Glaszmann Jean-Christophe, Dufour Philippe, Grivet Laurent, D'Hont Angélique, Deu Monique, Paulet Florence, Hamon Perla. 1996. In : Meeting on tropical plants : communications and posters. Montpellier : CIRAD, pp. 15-22. EUCARPIA meeting on tropical plants, Montpellier, France, 11 March 1996/15 March 1996.
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Competitive PCR assay of repeat sequence copy number in banana. Baurens Franc-Christophe, Lanaud Claire, Lagoda Pierre. 1996. In : Plant and animal genome IV = [Le génome des plantes et des animaux IV]. USDA. s.l. : s.n., p. 46. International Conference on the Status of Plant Genome Research. 4, San Diego, États-Unis, 14 January 1996/18 January 1996.

First step towards markings disease resistance and sugar yield component genes in a modern sugarcane cultivar. Grivet Laurent, D'Hont Angélique, Roques Danièle, Daugrois Jean-Heinrich, Paulet Florence, Glaszmann Jean-Christophe. 1996. In : Meeting on tropical plants : communications and posters. Montpellier : CIRAD, p. 265. EUCARPIA meeting on tropical plants, Montpellier, France, 11 March 1996/15 March 1996.
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Investigation of the complex genome structure of modern sugarcane cultivars, Saccharum spp., by DNA in situ hybridisation. D'Hont Angélique, Grivet Laurent, Feldmann Philippe, Rao P.S., Berding Nils, Glaszmann Jean-Christophe. 1996. In : Meeting on tropical plants : communications and posters. Montpellier : CIRAD, p. 264. EUCARPIA meeting on tropical plants, Montpellier, France, 11 March 1996/15 March 1996.
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La cartographie comparée des Andropogonées. Dufour Philippe, Grivet Laurent, D'Hont Angélique, Deu Monique, Hamon Perla, Glaszmann Jean-Christophe. 1996. In : Méribel 1995. INRA. s.l. : s.n., pp. 26-33. Réunion sur les Marqueurs Moléculaires chez les Végétaux, Méribel, France, 20 March 1995/24 March 1995.

Le génome des variétés modernes de canne à sucre. D'Hont Angélique, Grivet Laurent, Lu Y.H., Roques Danièle, Feldmann Philippe, Rao P.S., Daugrois Jean-Heinrich, Dufour Philippe, Berding Nils, Harnon P., Glaszmann Jean-Christophe. 1996. In : Proceedings XXII congress, 11th-15th September 1995, Cartagena, Colombia. Vol. 2. Cock J.H. (ed.), Brekelbaum T. (ed.); ISSCT. Cali : Tecnicana, pp. 363-367. ISSCT Congress. 22, Cartagena, Colombie, 11 September 1995/15 September 1995.

Molecular breeding in the Genus Musa : a strong case for STMS marker technology. Baurens Franc-Christophe, Grapin Agnès, Dambier Dominique, Noyer Jean-Louis, Lanaud Claire. 1996. In : Meeting on tropical plants : communications and posters. Montpellier : CIRAD, p. 89. EUCARPIA meeting on tropical plants, Montpellier, France, 11 March 1996/15 March 1996.
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RFLP mapping in cultivated sugarcane (Saccharum spp.): genome organization in a highly polyploid and aneuploid interspecific hybrid. Grivet Laurent, D'Hont Angélique, Roques Danièle, Feldmann Philippe, Lanaud Claire, Glaszmann Jean-Christophe. 1996. Genetics, 142 : pp. 987-1000.

Variabilité du clump de l'arachide (PCV). Dollet Michel, Vezian Katia. 1996. In : Rapport d'activités 1994-1995 du LPRC. CIRAD-CP; ORSTOM; LPRC. CIRAD-CP, ORSTOM, CIRAD-LPRC. Montpellier : ORSTOM, pp. 23-25.

The cassava biotechnology network and biotechnologies for improving the processing quality of cassava. Thro Ann Marie, Roca William M., Henry Guy. 1996. In : Cassava flour and starch : progress in research and development. Dufour Dominique (ed.), O'Brien Gerard M. (ed.), Best Rupert (ed.). CIRAD-SAR. Cali : CIAT, pp. 10-15. (CIAT Publication, 271) ISBN 958-9439-88-8 International Meeting on Cassava Flour and Starch, Cali, Colombie, 11 January 1994/15 January 1994.

A genetic linkage map of Theobroma cacao L. based on isozymes, RFLPs, and RAPDs markers. Lanaud Claire, Risterucci Ange-Marie, N'Goran Jeanne A.K., Clément Didier, Flament Marie-Henriette, Laurent V.. 1996. In : Meeting on tropical plants : communications and posters. Montpellier : CIRAD, p. 268. EUCARPIA meeting on tropical plants, Montpellier, France, 11 March 1996/15 March 1996.
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1995

Abundance and distribution of simple sequence repeats in the Musaceae family. Microsatellite markers to map the banana genome. Lagoda Pierre, Noyer Jean-Louis, Dambier Dominique, Baurens Franc-Christophe, Lanaud Claire. 1995. In : Induced mutations and molecular techniques for crop improvement = [Mutations induites et techniques moléculaires pour l'amélioration des plantes de culture]. IAEA; FAO. Vienne : IAEA, pp. 287-295. International Symposium on the Use of Induced Mutations and Molecular Techniques for Crop Improvement, Vienne, Autriche, 19 June 1995/23 June 1995.

Assessment of genomic variability in Xanthomonas campestris pv. mangiferaeindicae. Gagnevin Lionel, Pruvost Olivier. 1995. Phytopathology, 85 (10) : p. 1163. APS Annual Meeting, Pittsburg, États-Unis, 12 August 1995/16 August 1995.

Cartographie du génome des agrumes à l'aide des marqueurs moléculaires et distorsions de ségrégation. Luro François, Lorieux Mathias, Laigret Frédéric, Bové Joseph M., Ollitrault Patrick. 1995. In : Techniques et utilisations des marqueurs moléculaires. Bervillé A. (ed.), Tersac M. (ed.). INRA-, CIRAD. Versailles : INRA, pp. 69-82. (Les colloques, n. 72) ISBN 2-7380-0614-0 Colloque sur les techniques et utilisation des marqueurs moléculaires, Montpellier, France, 29 March 1994/31 March 1994.
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Genomic clones encoding 11S globulins in oats (Avena sativa L.). Tanchak M.A., Giband Marc, Potier Bernard, Schernthaner J.P., Dukiandjiev S., Altosaar Illimar. 1995. Genome (Ottawa) (38) : pp. 627-634.

Le sorgho. Création variétale et étude de la diversité génétique : synthèse des travaux effectués par le CIRAD-CA 1961-1994. Luce Claude. 1995. Montpellier : CIRAD-CA, 72 p. (Documents de travail du CIRAD-CA, 5-95)

Les graminées à la carte. Delseny Michel, Glaszmann Jean-Christophe. 1995. Biofutur (146) : pp. 52-56.

Marquage moléculaire chez la canne à sucre (Saccharum spp.) : décomposition d'une structure génétique complexe et application à l'amélioration variétale. Grivet Laurent. 1995. Orsay : Université de Paris-Sud, 120 p. Thèse d'université : Sciences : Université de Paris-Sud

Mitochondrial DNA polymorphism and phylogenetic relationships in Hevea brasiliensis. Hong Luo, Van Coppenolle B., Seguin Marc, Boutry M.. 1995. Molecular Breeding, 1 : pp. 51-63.

Progress in genome comparison between sugarcane, sorghum and maize. Dufour Philippe, Grivet Laurent, D'Hont Angélique, Deu Monique, Hamon Perla, Glaszmann Jean-Christophe. 1995. In : 3rd International conference on the status of plant genome research,San Diego, january 9-15 1995. New York : Scherago International, Résumé, p. 35. International Conference on the Status of Plant Genome Research. 3, San Diego, États-Unis, 15 January 1995/19 January 1995.

RFLP analysis of cytoplasmic and nuclear genomes used for Citrus taxonomy. Luro François, Laigret Frédéric, Bové Joseph M., Ollitrault Patrick. 1995. In : Mandarines : développements scientifiques récents, résumés oraux et posters. CIRAD-FLHOR, INRA. San Nicolao : CIRAD-FLHOR, pp. 12-13. Symposium méditerranéen sur mandarines, San Nicolao, France, 5 March 1995/11 March 1995.

Séquence du génome d'un clone infectieux de Maize Streak Virus (MSV) de la Réunion, génétiquement distinct des isolats africains. Peterschmitt Michel, Granier Martine, Frutos Roger, Isnard Muriel, Reynaud Bernard. 1995. In : Rencontres de virologies végétale. Centre du CAES du CNRS à Aussois (Savoie). Strasbourg : CNRS, p. 80. Rencontres de virologie végétale. 5, Aussois, France, 23 January 1995/27 January 1995.

Séquence du génome d'un clone infectieux de maize streak virus (MSV) de la Réunion, génétiquement distinct des isolats africains. Peterschmitt Michel, Granier Martine, Frutos Roger, Isnard Muriel, Reynaud Bernard. 1995. In : Agronomie = ISSN 0249-5627. (1995)vol.15 : s.n., p. 497. Conférence sur les maladies virales des poacées en Europe. 7, Versailles, France, 15 May 1995/18 May 1995.

Variations of nuclear genome size in the genus Citrus. Ollitrault Patrick, Dambier Dominique, Luro François. 1995. In : Mandarines : développements scientifiques récents, résumés oraux et posters. CIRAD-FLHOR, INRA. San Nicolao : CIRAD-FLHOR, 1 p. Symposium méditerranéen sur mandarines, San Nicolao, France, 5 March 1995/11 March 1995.

1994

Analyse du génome du cacao swollen shoot virus et mise au point d'une méthode d'infection du cacaoyer. Hagen L.S.. 1994. Paris : Université Pierre et Marie Curie, 193 p. Thèse d'université : Université Pierre et Marie Curie

Application of flow cytometry for citrus genetic and breeding. Ollitrault Patrick, Michaux-Ferrière Nicole. 1994. In : Proceedings of the 7th International Citrus Congress. Taxonomy, breeding and varieties, rootstocks and propagation, plant physiology and ecology. Tribulato E., Gentile A., Reforgiato G.. ISC. Riverside : ISC, pp. 193-198. International Citrus Congress. 7, Acireale, Italie, 8 March 1992/13 March 1992.

Aspects statistiques de la cartographie des marqueurs moléculaires. Lorieux Mathias. 1994. Montpellier : CIRAD, 49 p. (Documents de travail de la mission biométrie, n. 1)

Biotechnologies au CIRAD CA. Compte-rendu des communications. CIRAD-CA - FRA. 1994. Montpellier : CIRAD-CA, 117 p. Biotechnologies au CIRAD CA, Montpellier, France, 5 September 1994/6 September 1994.

Caractérisation des ressources génétiques des ignames africaines (Dioscorea spp.) : utilisation potentielle pour l'amélioration. Zounjihekpon J., Hamon Perla, Hamon Serge, Tio Touré Bakary. 1994. In : Evaluation and exploitation of genetic resources pre-breeding : Proceedings of the genetic resources section, meeting of EUCARPIA, 15-18 March 1994, Clermont-Ferrand, France. Balfourier F. (ed.), Perretant M.R. (ed.). INRA, GEVES. Wageningen : EUCARPIA, pp. 303-304. EUCARPIA Genetic Resources Section Meeting, Clermont-Ferrand, France, 15 March 1994/18 March 1994.

Cartographie comparée du génome chez les graminées ; la canne à sucre au sein de la tribu des Andropogonées. Grivet Laurent, D'Hont Angélique, Hamon Perla, Glaszmann Jean-Christophe. 1994. In : Techniques et utilisations des marqueurs moléculaires = [Techniques and uses of molecular markers]. INRA. Paris : INRA, pp. 95-100. Colloque sur les techniques et utilisation des marqueurs moléculaires, Montpellier, France, 29 March 1994/31 March 1994.
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Cartographie du génome d'un hybride intergénérique d'agrume à l'aide de marqueurs moléculaires. Luro François, Lorieux Mathias, Laigret Frédéric, Bové Joseph M., Ollitrault Patrick. 1994. Fruits, 49 (5-6) : pp. 404-408. Journées FLHOR vergers tropicaux, Montpellier, France, 30 August 1993/5 September 1993.

Cartographie intégrée du génome du cacaoyer à l'aide de marqueurs biochimiques et moléculaires. Lanaud Claire, Risterucci Ange-Marie, N'Goran Jeanne A.K., Sounigo Olivier. 1994. In : 11. Conférence internationale sur la recherche cacaoyère. Actes = 11. International cocoa research conference. Proceedings$ENG. Lagos : Cocoa Producers' Alliance, pp. 349-355. ISBN 0-9507691-OX Conférence internationale sur la recherche cacaoyère. 11, Yamoussoukro, Côte d'Ivoire, 18 July 1993/24 July 1993.
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Comparative genome mapping of sugar cane with other species within the Andropogoneae tribe. Grivet Laurent, D'Hont Angélique, Dufour Philippe, Hamon Perla, Roques Danièle, Glaszmann Jean-Christophe. 1994. Heredity, 73 : pp. 500-508.

Intérêts et limites des marqueurs RAPD pour la cartographie du génome de Theobroma cacao L. N'Goran Jeanne A.K., Lanaud Claire, Risterucci Ange-Marie, Sounigo Olivier. 1994. In : 11. Conférence internationale sur la recherche cacaoyère. Actes = 11. International cocoa research conference. Proceedings$ENG. Lagos : Cocoa Producers' Alliance, pp. 335-336. ISBN 0-9507691-OX Conférence internationale sur la recherche cacaoyère. 11, Yamoussoukro, Côte d'Ivoire, 18 July 1993/24 July 1993.
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La cartographie du génome du bananier (Musa spp.) au CIRAD-AGETROP. Lagoda Pierre, Noyer Jean-Louis. 1994. Infomusa (Ed. Française), 3 (2) : p. 4.

Maternal inheritance of chloroplast genome and paternal inheritance of mitochondrial genome in bananas (Musa acuminata). Fauré Sabine, Noyer Jean-Louis, Carreel Françoise, Horry Jean-Pierre, Bakry Frédéric, Lanaud Claire. 1994. Current Genetics, 25 (3) : pp. 265-269.

Résistance génétique à la cowdriose. Pépin L., Maillard Jean-Charles, Ruff G., Vaiman D., Kemp S., Camus Emmanuel, Bensaïd Albert. 1994. In : Biotechnologies du diagnostic et de la prévention des maladies animales. EL Hassane Diop P., Kaeckenbeeck A.. Paris : John libbey eurotext, pp. 305-311. ISBN 2-7420-0074-7 Journées scientifiques du réseau biotechnologies animales de l'UREF. 2, Liège, Belgique, 13 October 1993/15 October 1993.

Variation de la taille du génome nucléaire dans le genre Citrus. Ollitrault Patrick, Dambier Dominique, Luro François, Duperray C.. 1994. Fruits, 49 (5-6) : pp. 390-393. Journées FLHOR vergers tropicaux, Montpellier, France, 30 August 1993/5 September 1993.

A molecular approach to unraveling the genetics of sugarcane, a complex polyploid of the Andropogoneae tribe. D'Hont Angélique, Lu Y.H., Gonzalez De Léon Diego, Grivet Laurent, Feldmann Philippe, Lanaud Claire, Glaszmann Jean-Christophe. 1994. Genome (Ottawa), 37 : pp. 222-230.

1993

Application of RFLPs to Musa sp. : a preliminary study of genetic diversity. Carreel Françoise, Fauré Sabine, Horry Jean-Pierre, Noyer Jean-Louis, Gonzalez De Léon Diego. 1993. In : Breeding banana and plantain for resistance to diseases and pests. Ganry Jacky (ed.). CIRAD-FLHOR. Montpellier : CIRAD-FLHOR, p. 373. ISBN 2-87614-108-6 International symposium on genetic improvement of bananas for resistance to diseases and pests, Montpellier, France, 7 September 1992/9 September 1992.
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Cartographie du génome des agrumes et analyse des ségrégations non mendéliennes. Luro François. 1993. In : Journées FLHOR vergers tropicaux = FLHOR seminar on tropical orchards$ENG. CIRAD-FLHOR. Montpellier : CIRAD-FLHOR, pp. 61-62. Réunion annuelle CIRAD-FLHOR, Montpellier, France, 30 August 1993/5 September 1993.
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Comparaison des polymorphismes entre espèces de ruminants. Pépin L., Vaiman D., N'Guyen T.C., Kemp S.J., Bensaïd Albert. 1993. In : Ressources génétiques animales et végétales, méthodologies d'étude et de gestion : colloque BRG/INRA, Montpellier (France), 28-30/09/1993. Résumés des communications et posters. BRG, INRA. Montpellier : INRA, Résumé, p. 75. Colloque national BRG/INRA. 1, Montpellier, France, 28 September 1993/30 September 1993.

Etude de l'organisation génétique des sorghos sauvages et cultivés par l'analyse des génomes cytoplasmiques. Deu Monique. 1993. Montpellier : Université de Montpellier 2, 36 p. Mémoire DEA : Fin d'Etudes en Evolution et Ecologie : Université des sciences et techniques du Languedoc

Etude de la variabilité du virus du rabougrissement de l'arachide "peanut clump" virus (PCV). Manohar S.K.. 1993. Montpellier : UM2, 183 p. Thèse de doctorat : Physiologie : Université Montpellier 2

Genetic mapping of the banana diploid genome : toward an integrated approach to the study of the Musa genome and the use of molecular marker technologies in Musa breeding. Gonzalez De Léon Diego, Fauré Sabine. 1993. In : Biotechnology applications for banana and plantain improvement : proceedings = [Applications des biotechnologies à l'amélioration des bananiers et plantains]. INIBAP. Montpellier : INIBAP, pp. 29-51. Workshop on Biotechnology Applications for Banana and Plantain Improvement, San José, Costa Rica, 27 January 1992/31 January 1992.
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Genetic mapping of the diploid genome of bananas (Musa acuminata). Fauré Sabine, Noyer Jean-Louis, Horry Jean-Pierre, Bakry Frédéric, Lanaud Claire, Gonzalez De Léon Diego. 1993. In : Breeding banana and plantain for resistance to diseases and pests. Ganry Jacky (ed.). CIRAD-FLHOR. Montpellier : CIRAD-FLHOR, pp. 55-63. ISBN 2-87614-108-6 International symposium on genetic improvement of bananas for resistance to diseases and pests, Montpellier, France, 7 September 1992/9 September 1992.
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Genome similarity between sugarcane, maize and sorghum, three members of the Andropogoneae tribe. D'Hont Angélique, Lu Y.H., Gonzalez De Léon Diego, Grivet Laurent, Dufour Philippe, Hamon Perla, Glaszmann Jean-Christophe. 1993. In : Breeding and molecular biology : accomplishments and future promises = [Sélection et biologie moléculaire : réalisations et espoirs futurs]. Bianchi A. (ed.), Lupotto E. (ed.), Motto M. (ed.); EUCARPIA. Wageningen : EUCARPIA, pp. 107-113. EUCARPIA Conference. 16, Bergame, Italie, 6 June 1993/9 June 1993.

Nucleotide sequence and genomic organization of cacao swollen shoot virus. Hagen L.S., Jacquemond M., Lépingle A., Lot H., Tepfer Mark. 1993. Virology, 196 : pp. 619-628.

Ribosomal DNA variations in wild and cultivated rubber tree (Hevea brasiliensis). Besse Pascale, Seguin Marc, Lebrun Patricia, Lanaud Claire. 1993. Genome (Ottawa), 36 : pp. 1049-1057.

Stratégies de sélection et de lutte génétique contre les phytoparasites. Vales Michel. 1993. In : Interactions plantes - microorganismes : Compte rendu du séminaire régional organisé par l'IFS et l'ORSTOM, Dakar, Sénégal, 17-22 février 1992 = Interactions between plants and microorganisms. IFS, ORSTOM. Stockholm : IFS, pp. 353-370. ISBN 91-85798-31-2 Séminaire régional sur les interactions plantes-microorganismes, Dakar, Sénégal, 17 February 1992/22 February 1992.

Use of microsatellites as genomic markers to study resistance to cowdriosis. Pépin L., Camus Emmanuel, Matheron Gérard, Bensaïd Albert. 1993. Revue d'Elevage et de Médecine Vétérinaire des Pays Tropicaux, 46 (1-2) : p. 209. Biennial Conference of the Society for Tropical Veterinary Medicine. 2, Saint-François, Guadeloupe, 2 February 1993/6 February 1993.
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Variation de la taille du génôme nucléaire dans le genre Citrus. Ollitrault Patrick, Dambier Dominique, Duperray C.. 1993. In : Journées FLHOR vergers tropicaux = FLHOR seminar on tropical orchards$ENG. CIRAD-FLHOR. Montpellier : CIRAD-FLHOR, pp. 63-64. Réunion annuelle CIRAD-FLHOR, Montpellier, France, 30 August 1993/5 September 1993.
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A molecular marker-based linkage map of diploid bananas (Musa acuminata). Fauré Sabine, Noyer Jean-Louis, Horry Jean-Pierre, Bakry Frédéric, Lanaud Claire, Gonzalez De Léon Diego. 1993. Theoretical and Applied Genetics, 87 (4) : pp. 517-526.
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1992

Application of flow cytometry for citrus genetic and breeding. Ollitrault Patrick, Michaux-Ferrière Nicole. 1992. In : International Citrus Congress. 7. Acireale : International Society of Citriculture, 20 p. International Citrus Congress. 7, Acireale, Italie, 8 March 1992/13 March 1992.

Cartographie du génome et caractères quantitatifs : l'approche biométrique et les contraintes biologiques des agrumes. Perrier Xavier, Ollitrault Patrick, Dubois Cécile. 1992. Fruits, 47 (spéc. Agrumes) : pp. 135-144.

Estimation de la quantité d'ADN nucléaire chez Theobroma cacao L. par cytofluorimétrie en flux. Lanaud Claire, Hamon Perla, Duperray C.. 1992. Café, Cacao, Thé, 36 (1) : pp. 3-8.

Etude critique de la technique de cytométrie en flux appliquée à l'amélioration des plantes : résultats obtenus pour quelques agrumes. Ollitrault Patrick, Michaux-Ferrière Nicole. 1992. Fruits, 47, numéro spécial Agrumes : pp. 195-203.

Etude de la diversité du maize streak virus. Peterschmitt Michel, Reynaud Bernard. 1992. In : Réunion bisannuelle du programme maïs de l'IRAT - première partie : compte-rendu ; deuxième partie : communications. CIRAD-IRAT-Programme mais. Montpellier : CIRAD-IRAT, pp. 74-79. Réunion bisannuelle du programme maïs de l'IRAT, Montpellier, France, 3 September 1991/6 September 1991.

Genetic mapping of the diploid banana genome using molecular markers. Fauré Sabine, Noyer Jean-Louis, Horry Jean-Pierre, Bakry Frédéric, Lanaud Claire, Gonzales De Léon D.. 1992. In : Plant Genome I. Montpellier : CIRAD-BIOTROP, 5 p. International Conference on the Plant Genome. 1, San Diego, États-Unis, 9 November 1992/11 November 1992.

Progrès récents des biotechnologies du riz. Guiderdoni Emmanuel. 1992. L'Agronomie Tropicale (1975), 46 (2) : pp. 137-153.

Variation of ribosomal gene spacer length among wild and cultivated banana. Lanaud Claire, Tézenas Du Montcel Hugues, Jolivot M.P., Glaszmann Jean-Christophe, Gonzalez De Léon Diego. 1992. Heredity, 68 (2) : pp. 147-156.

1991

RFLP analyses in the bananas (Musa spp.). Fauré Sabine, Carreel Françoise, Amson C., Aubert Georges, Horry Jean-Pierre, Gonzalez De Léon Diego, Lanaud Claire. 1991. In : EUCARPIA Symposium on Genetic Manipulation in Plant Breeding - Molecular Biology : Breeding Interface. Tarragona : EUCARPIA, 5 p. EUCARPIA Symposium on Genetic Manipulation in Plant Breeding - Molecular Biology / Breeding Interface, Tarragona, Espagne, 1991.

Sugarcane and maize : resolving the genome of a complex polyploid with DNA probes of a distant diploid relative. D'Hont Angélique, Gonzalez De Léon Diego, Feldmann Philippe, Grivet Laurent, Glaszmann Jean-Christophe. 1991. In : Plant Genome I. Official program and abstracts. Scherago International. Jersey City : Scherago International, p. 17. International Conference on the Plant Genome. 1, San Diego, États-Unis, 9 November 1992/11 November 1992.

1990

Isozyme markers in rice : genetic analysis and linkage relationships. Pham Jean Louis, Glaszmann Jean-Christophe, Sano R., Barbier P., Ghesquière Alain, Second Gérard. 1990. Genome (Ottawa), 33 (3) : pp. 348-359.

Morbillivirus group : genome organisation and proteins. Diallo Adama. 1990. Veterinary Microbiology, 23 (1-4) : pp. 155-163.

1989

Biotechnologie du maïs. Glaszmann Jean-Christophe. 1989. In : Réunion bisannuelle du programme maïs de l'IRAT. 1e partie : compte-rendu. 2e partie : communications. CIRAD-IRAT. Montpellier : CIRAD-IRAT, pp. 137-142. Réunion bisannuelle du programme maïs de l'IRAT, Montpellier, France, 4 September 1989/8 September 1989.

Organisation génomique du complexe majeur d'histocompatibilité du bovin. Bensaïd Albert, Kaushal A., Young J.R., Kemp S.J., Teale A.J.. 1989. Annales de Recherches Vétérinaires, 20 : pp. 389-394. ILRAD Laboratoire international pour la recherche sur les maladies animales, Nairobi, Kenya, 27 September 1987/1 October 1987.

1988

Etude comparée des génomes de procaryotes intracellulaires obligatoires à cycle chlamydien, agents pathogènes d'hôtes invertébrés et vertébrés. Frutos Roger. 1988. Montpellier : USTL, 129 p. Thèse de doctorat : Sciences Biologiques : Université des sciences et techniques du Languedoc

1987

Quelques résultats sur la culture in vitro du bananier et du plantain dans le cadre d'un programme d'amélioration génétique. Teisson Claude. 1987. In : ACORBAT 85 - Compte-rendu de la VIIe Réunion = ACORBAT 85 - Memorias VII Reunion. Galindo J.J. (ed.), Jaramillo Ramiro (ed.). ACORBAT, CATIE-Departamento de Produccion Vegetal. Turrialba : CATIE, pp. 71-74. (Boletin Tecnico CATIE Serie Tecnica, 121) ISBN 9957-57-028-0 Reunion ACORBAT. 7, San José, Costa Rica, 23 September 1985/27 September 1985.

1984

Etude du polymorphisme enzymatique chez le cacaoyer. I. Mise au point d'une méthode d'extraction et mise en évidence d'un locus spécifiant une estérase. Amefia Y.K., Cilas Christian, Djiekpor E.K., Partiot Michel. 1984. Café, Cacao, Thé, 28 (2) : pp. 89-94.

1982

1980

Examen du groupe de liaison III du cotonnier Gossypium hirsutum : description d'un nouveau phénotype cluster et localisation des gènes. Hau Bernard, Koto E., Schwendiman Jacques. 1980. Coton et Fibres Tropicales, 35 (4) : pp. 359-367.
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1965

Etude des relations génétiques et caryologiques entre génomes voisins du genre Gossypium. Kammacher P.. 1965. Paris : IRCT-France, 133 p. Thèse de doctorat : Sciences : Université de Paris

1960

Cytogénétique. Sur les affinités caryologiques entre les espèces cultivées. Le cotonnier tétraploïdes et l'espèce sauvage diploïde Gossypium raimondii. Kammacher P., Heim R.. 1960. Comptes Rendus des Séances de l'Académie des Sciences. Série 3, Sciences de la Vie : pp. 2745-2747.

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