Development of 14 minisatellite markers for the citrus canker bacterium, Xanthomonas citri pv. citri

Bui Thi Ngoc Lan, Vernière Christian, Vital Karine, Guérin Fabien, Gagnevin Lionel, Brisse Sylvain, Ah-You Nathalie, Pruvost Olivier. 2009. Development of 14 minisatellite markers for the citrus canker bacterium, Xanthomonas citri pv. citri. Molecular Ecology Resources, 9 (1) : pp. 125-127.

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Quartile : Q3, Sujet : ECOLOGY / Quartile : Q4, Sujet : BIOCHEMISTRY & MOLECULAR BIOLOGY / Quartile : Q4, Sujet : EVOLUTIONARY BIOLOGY

Abstract : We screened the genome of Xanthomonas citri pv. citri strain 306 for tandem repeats. A multiplex polymerase chain reaction protocol was used to assess the genetic diversity of 239 strains of X. citri pv. citri from Asia. The total number of alleles per locus ranged from three to 20. Using pooled data sets, 223 different haplotypes were identified. Successful amplifications were obtained at most loci for seven other X. citri pathovars. This typing scheme is expected to be useful at different spatial scales for population studies of pathovars of X. citri, several of which cause plant diseases of economic importance. (Résumé d'auteur)

Mots-clés Agrovoc : Xanthomonas campestris citri

Mots-clés géographiques Agrovoc : Asie

Mots-clés complémentaires : Xanthomonas citri pv citri

Classification Agris : H20 - Plant diseases

Champ stratégique Cirad : Axe 1 (2005-2013) - Intensification écologique

Auteurs et affiliations

  • Bui Thi Ngoc Lan, CIRAD-BIOS-UMR PVBMT (REU)
  • Vernière Christian, CIRAD-BIOS-UMR PVBMT (REU) ORCID: 0000-0002-2312-2073
  • Vital Karine, CIRAD-BIOS-UMR PVBMT (REU)
  • Guérin Fabien, Université de la Réunion (REU)
  • Gagnevin Lionel, CIRAD-BIOS-UMR PVBMT (REU)
  • Brisse Sylvain, Institut Pasteur (FRA)
  • Ah-You Nathalie, Université de la Réunion (REU)
  • Pruvost Olivier, CIRAD-BIOS-UMR PVBMT (REU)

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