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A class-wide phylogenetic assessment of Dothideomycetes

Schoch C.L, Crous P.W., Groenewald Johannes Z., Boehm E.W.A., Burgess T.I., De Gruyter J., De Hoog G.S., Dixon L.J., Grube M., Gueidan C., Harada Y., Hatakeyama S., Hirayama K., Hosoya T., Huhndorf S.M., Hyde Kevin D., Jones E.B.G., Kohlmeyer J., Kruys Å., Li Y.M., Lücking R., Lumbsch H.T., Marvanová L., Mbatchou J.S., McVay A.H., Miller A.N., Mugambi G.K., Muggia L., Nelsen M.P., Nelson P., Owensby C.A., Phillips A.J.L., Phongpaichit S., Pointing S.B., Pujade-Renaud Valérie, Raja H.A., Rivas Plata E., Robbertse B., Ruibal C., Sakayaroj J., Sano T., Selbmann L., Shearer C.A., Shirouzu T., Slippers Bernard, Suetrong S., Tanaka K., Volkmann-Kohlmeyer B., Wingfield M.J., Wood A.R., Woudenberg J.H.C., Yonezawa H., Zhang Y.. 2009. A class-wide phylogenetic assessment of Dothideomycetes. Studies in Mycology (64) : pp. 1-15.

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Quartile : Outlier, Sujet : MYCOLOGY

Abstract : We present a comprehensive phylogeny derived from 5 genes, nucSSU, nucLSU rDNA, TEF1, RPB1 and RPB2, for 356 isolates and 41 families (six newly described in this volume) in Dothideomycetes. All currently accepted orders in the class are represented for the first time in addition to numerous previously unplaced lineages. Subclass Pleosporomycetidae is expanded to include the aquatic order Jahnulales. An ancestral reconstruction of basic nutritional modes supports numerous transitions from saprobic life histories to plant associated and lichenised modes and a transition from terrestrial to aquatic habitats are confirmed. Finally, a genomic comparison of 6 dothideomycete genomes with other fungi finds a high level of unique protein associated with the class, supporting its delineation as a separate taxon. (Résumé d'auteur)

Classification Agris : H20 - Plant diseases

Champ stratégique Cirad : Axe 4 (2005-2013) - Santé animale et maladies émergentes

Auteurs et affiliations

  • Schoch C.L, NIH (USA)
  • Crous P.W., CBS (NLD)
  • Groenewald Johannes Z., CBS (NLD)
  • Boehm E.W.A., Kean University (USA)
  • Burgess T.I., Murdoch University (AUS)
  • De Gruyter J., CBS (NLD)
  • De Hoog G.S., CBS (NLD)
  • Dixon L.J., USDA (USA)
  • Grube M., Karl-Franzens-Universität Graz (AUT)
  • Gueidan C., CBS (NLD)
  • Harada Y., Hirosaki University (JPN)
  • Hatakeyama S., Hirosaki University (JPN)
  • Hirayama K., Hirosaki University (JPN)
  • Hosoya T., National Museum of Nature and Science (JPN)
  • Huhndorf S.M., Muséum Field (USA)
  • Hyde Kevin D., Mae Fah Luang University (THA)
  • Jones E.B.G., BIOTEC [National Center for Genetic Engineering and Biotechnology] (THA)
  • Kohlmeyer J., University of North Carolina (USA)
  • Kruys Å., Uppsala University (SWE)
  • Li Y.M., Chinese Academy of Forestry (CHN)
  • Lücking R., Muséum Field (USA)
  • Lumbsch H.T., Muséum Field (USA)
  • Marvanová L., Masaryk University (CZE)
  • Mbatchou J.S., Muséum Field (USA)
  • McVay A.H., Oregon State University (USA)
  • Miller A.N., University of Illinois (USA)
  • Mugambi G.K., National Museums of Kenya (KEN)
  • Muggia L., Karl-Franzens-Universität Graz (AUT)
  • Nelsen M.P., Muséum Field (USA)
  • Nelson P., University of Minnesota (USA)
  • Owensby C.A., Oregon State University (USA)
  • Phillips A.J.L., Universidade Nova de Lisboa (PRT)
  • Phongpaichit S., Prince of Songkla University (THA)
  • Pointing S.B., University of Hong Kong (CHN)
  • Pujade-Renaud Valérie, CIRAD-BIOS-UMR DAP (FRA)
  • Raja H.A., University of Illinois (USA)
  • Rivas Plata E., Muséum Field (USA)
  • Robbertse B., NIH (USA)
  • Ruibal C., Universidad Politécnica de Madrid (ESP)
  • Sakayaroj J., BIOTEC [National Center for Genetic Engineering and Biotechnology] (THA)
  • Sano T., Hirosaki University (JPN)
  • Selbmann L., Università degli studi della Tuscia (ITA)
  • Shearer C.A., University of Illinois (USA)
  • Shirouzu T., Tottori University (JPN)
  • Slippers Bernard, University of Pretoria (ZAF)
  • Suetrong S., BIOTEC [National Center for Genetic Engineering and Biotechnology] (THA)
  • Tanaka K., Hirosaki University (JPN)
  • Volkmann-Kohlmeyer B., University of North Carolina (USA)
  • Wingfield M.J., FABI (ZAF)
  • Wood A.R., Plant Protection Research Institute (ZAF)
  • Woudenberg J.H.C., CBS (NLD)
  • Yonezawa H., Hirosaki University (JPN)
  • Zhang Y., University of Hong Kong (CHN)

Source : Cirad-Agritrop (https://agritrop.cirad.fr/579599/)

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