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sPlotOpen – An environmentally balanced, open‐access, global dataset of vegetation plots

Sabatini Francesco Maria, Lenoir Jonathan, Hattab Tarek, Arnst Elise Aimee, Chytrý Milan, Dengler Jürgen, De Ruffray Patrice, Hennekens Stephan M., Jandt Ute, Jansen Florian, Jiménez‐Alfaro Borja, Kattge Jens, Levesley Aurora, Pillar Valério D., Purschke Olivier, Sandel Brody, Sultana Fahmida, Aavik Tsipe, Aćić Svetlana, Acosta Alicia T.R., Agrillo Emiliano, Alvarez Miguel, Apostolova Iva, Arfin Khan Mohammed A. S., Arroyo Luzmila, Attorre Fabio, Aubin Isabelle, Banerjee Arindam, Bauters Marijn, Bergeron Yves, Bergmeier Erwin, Biurrun Idoia, Bjorkman Anne D., Bonari Gianmaria, Bondareva Viktoria, Brunet Jörg, Carni Andraz, Casella Laura, Cayuela Luis, Cerný Tomás, Chepinoga Victor, Csiky János, Ćušterevska Renata, De Bie Els, De Gasper André Luis, De Sanctis Michele, Dimopoulos Panayotis, Dolezal Jiri, Dziuba Tetiana, El‐Sheikh Mohamed Abd El‐Rouf Mousa, Enquist Brian, Ewald Jörg, Fazayeli Farideh, Field Richard, Finckh Manfred, Gachet Sophie, Galán‐de‐Mera Antonio, Garbolino Emmanuel, Gholizadeh Hamid, Giorgis Melisa, Golub Valentin, Alsos Inger Greve, Grytnes John-Arvid, Guerin Gregory Richard, Gutiérrez Alvaro G., Haider Sylvia, Hatim Mohamed Z., Herault Bruno, et al.. 2021. sPlotOpen – An environmentally balanced, open‐access, global dataset of vegetation plots. Global Ecology and Biogeography, 30 (9) : 1740-1764.

Article de revue ; Article de recherche ; Article de revue à facteur d'impact
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Url - jeu de données - Entrepôt autre : https://github.com/fmsabatini/sPlotOpen_Code / Url - jeu de données - Entrepôt autre : https://github.com/fmsabatini/sPlotOpen_Manuscript

Quartile : Q1, Sujet : ECOLOGY / Quartile : Q1, Sujet : GEOGRAPHY, PHYSICAL

Liste HCERES des revues (en SHS) : oui

Thème(s) HCERES des revues (en SHS) : Géographie-Aménagement-Urbanisme-Architecture

Résumé : Motivation: Assessing biodiversity status and trends in plant communities is critical for understanding, quantifying and predicting the effects of global change on ecosystems. Vegetation plots record the occurrence or abundance of all plant species co-occurring within delimited local areas. This allows species absences to be inferred, information seldom provided by existing global plant datasets. Although many vegetation plots have been recorded, most are not available to the global research community. A recent initiative, called 'sPlot', compiled the first global vegetation plot database, and continues to grow and curate it. The sPlot database, however, is extremely unbalanced spatially and environmentally, and is not open-access. Here, we address both these issues by (a) resampling the vegetation plots using several environmental variables as sampling strata and (b) securing permission from data holders of 105 local-to-regional datasets to openly release data. We thus present sPlotOpen, the largest open-access dataset of vegetation plots ever released. sPlotOpen can be used to explore global diversity at the plant community level, as ground truth data in remote sensing applications, or as a baseline for biodiversity monitoring. Main types of variable contained: Vegetation plots (n = 95,104) recording cover or abundance of naturally co-occurring vascular plant species within delimited areas. sPlotOpen contains three partially overlapping resampled datasets (c. 50,000 plots each), to be used as replicates in global analyses. Besides geographical location, date, plot size, biome, elevation, slope, aspect, vegetation type, naturalness, coverage of various vegetation layers, and source dataset, plot-level data also include community-weighted means and variances of 18 plant functional traits from the TRY Plant Trait Database. Spatial location and grain Global, 0.01–40,000 m². Time period and grain: 1888–2015, recording dates. Major taxa and level of measurement: 42,677 vascular plant taxa, plot-level records. Software format: Three main matrices (.csv), relationally linked.

Mots-clés Agrovoc : parcelle, couverture végétale, biodiversité, végétation, communauté végétale, biogéographie, impact sur l'environnement, diffusion de l'information, données ouvertes

Mots-clés complémentaires : jeu de données

Mots-clés libres : Big data, Biodiversity, Biogeography, Database, Functional traits, Macroecology, Vascular plants, Vegetation plots

Classification Agris : F70 - Taxonomie végétale et phytogéographie

Champ stratégique Cirad : CTS 1 (2019-) - Biodiversité

Auteurs et affiliations

  • Sabatini Francesco Maria, iDiv (DEU) - auteur correspondant
  • Lenoir Jonathan, UPJV (FRA)
  • Hattab Tarek, CNRS (FRA)
  • Arnst Elise Aimee, Manaaki Whenua (NZL)
  • Chytrý Milan, Masaryk University (CZE)
  • Dengler Jürgen, iDiv (DEU)
  • De Ruffray Patrice, CNRS (FRA)
  • Hennekens Stephan M., Wageningen Environmental Research (NLD)
  • Jandt Ute, iDiv (DEU)
  • Jansen Florian, University of Rostock (DEU)
  • Jiménez‐Alfaro Borja, Universidad de Oviedo (ESP)
  • Kattge Jens, Max Planck Institut für Biogeochemie (DEU)
  • Levesley Aurora, University of Leeds (GBR)
  • Pillar Valério D., FURG (BRA)
  • Purschke Olivier, Martin Luther University (DEU)
  • Sandel Brody, Santa Clara University (USA)
  • Sultana Fahmida, Shahjalal University of Science and Technology (BGD)
  • Aavik Tsipe, University of Tartu (EST)
  • Aćić Svetlana, University of Belgrade (SRB)
  • Acosta Alicia T.R., Universita Roma Tre (ITA)
  • Agrillo Emiliano, ISPRA (ITA)
  • Alvarez Miguel, Universität Bonn (DEU)
  • Apostolova Iva, Bulgarian Academy of Science (BGR)
  • Arfin Khan Mohammed A. S., Shahjalal University of Science and Technology (BGD)
  • Arroyo Luzmila, UAGRM (BOL)
  • Attorre Fabio, Universita di Roma La Sapienza (ITA)
  • Aubin Isabelle, Natural Resources Canada (CAN)
  • Banerjee Arindam, University of Illinois (USA)
  • Bauters Marijn, Ghent University (BEL)
  • Bergeron Yves, Université de Québec (CAN)
  • Bergmeier Erwin, Georg-August University of Göttingen (DEU)
  • Biurrun Idoia, University of the Basque Country (ESP)
  • Bjorkman Anne D., University of Gothenburg (CHE)
  • Bonari Gianmaria, Free University of Bolzano-Bozen (ITA)
  • Bondareva Viktoria, Institute of Ecology of the Volga River Basin (RUS)
  • Brunet Jörg, Swedish University of Agricultural Sciences (SWE)
  • Carni Andraz, Center of the Slovenian Academy of Sciences and Arts (SVN)
  • Casella Laura, ISPRA (ITA)
  • Cayuela Luis, Universidad Rey Juan Carlos (ESP)
  • Cerný Tomás, CZU (CZE)
  • Chepinoga Victor, Central Siberian Botanical Garden (RUS)
  • Csiky János, University of Pécs (HUN)
  • Ćušterevska Renata, Ss. Cyril and Methodius University in Skopje (MKD)
  • De Bie Els, INBO (BEL)
  • De Gasper André Luis, Universidade Regional de Blumenau (BRA)
  • De Sanctis Michele, Universita di Roma La Sapienza (ITA)
  • Dimopoulos Panayotis, University of Patras (GRL)
  • Dolezal Jiri, ASCR (CZE)
  • Dziuba Tetiana, National Academy of Sciences of Ukraine (UKR)
  • El‐Sheikh Mohamed Abd El‐Rouf Mousa, King Saud University (SAU)
  • Enquist Brian, University of Arizona (USA)
  • Ewald Jörg, Hochschule Weihenstephan-Triesdorf (DEU)
  • Fazayeli Farideh, University of Minnesota (USA)
  • Field Richard, University of Nottingham (GBR)
  • Finckh Manfred, Universität Hamburg (DEU)
  • Gachet Sophie, IMBE (FRA)
  • Galán‐de‐Mera Antonio, Universidad CEU San Pablo (ESP)
  • Garbolino Emmanuel, Nova Sophia (FRA)
  • Gholizadeh Hamid, Mazandaran University (IRN)
  • Giorgis Melisa, CONICET (ARG)
  • Golub Valentin, Institute of Ecology of the Volga River Basin (RUS)
  • Alsos Inger Greve, The Arctic University of Norway (NOR)
  • Grytnes John-Arvid, University of Bergen (NOR)
  • Guerin Gregory Richard, University of Adelaide (AUS)
  • Gutiérrez Alvaro G., Universidad de Chile (CHL)
  • Haider Sylvia, Martin Luther University (DEU)
  • Hatim Mohamed Z., Wageningen University (NLD)
  • Herault Bruno, CIRAD-ES-UPR Forêts et sociétés (CIV) ORCID: 0000-0002-6950-7286
  • et al.

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