A demo-genetic individual-based model for Atlantic salmon populations: Model structure, parameterization and sensitivity

Piou Cyril, Prévost Etienne. 2012. A demo-genetic individual-based model for Atlantic salmon populations: Model structure, parameterization and sensitivity. Ecological Modelling, 231 : 37-52.

https://doi.org/10.1016/j.ecolmodel.2012.01.025

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Quartile : Q2, Sujet : ECOLOGY

Liste HCERES des revues (en SHS) : oui

Thème(s) HCERES des revues (en SHS) : Economie-gestion

Résumé : Predicting the persistence and adaptability of natural populations to climate change is a challenging task. Mechanistic models that integrate biological and evolutionary processes are helpful toward this aim. Atlantic salmon, Salmo salar (L.), is a good candidate to assess the effect of environmental change on a species with a complex life history through an integrative modelling approach due to (i) a large amount of knowledge concerning its biology and (ii) extensive historical data sets that can be used for model validation. This paper presents an individual-based demo-genetic model developed to simulate S. salar population dynamics in southern European populations: IBASAM (Individual-Based Atlantic SAlmon Model). The model structure is described thoroughly. A parameterization exercise was conducted to adjust the model to an extensive set of demographic data collected over 15 years on the Scorff River, Brittany, France. A sensitivity analysis showed that two parameters determining mean and variability of juvenile growth rates were crucial in structuring the simulated populations. Additionally, realistic microevolutionary patterns of different aspects of life history were predicted by the model, reproducing general knowledge on S. salar population biology. The integration into IBASAM of a demo-genetic structure coupled with the explicit representation of individual variability and complex life histories makes it a cohesive and novel tool to assess the effect of potential stressors on evolutionary demography of Atlantic salmon in further studies.

Mots-clés Agrovoc : modèle de simulation, modélisation environnementale, changement climatique, dynamique des populations, écologie animale, génétique animale, étude de cas, Salmo salar, adaptabilité

Mots-clés géographiques Agrovoc : Europe, Bretagne, France

Classification Agris : U10 - Informatique, mathématiques et statistiques
L10 - Génétique et amélioration des animaux
L20 - Écologie animale
P01 - Conservation de la nature et ressources foncières

Champ stratégique Cirad : Hors axes (2005-2013)

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