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Some ethylene biosynthesis and AP2/ERF genes reveal a specific pattern of expression during somatic embryogenesis in Hevea brasiliensis

Piyatrakul Piyanuch, Putranto Riza Arief, Martin Florence, Rio Maryannick, Dessailly Florence, Leclercq Julie, Dufayard Jean-François, Lardet Ludovic, Montoro Pascal. 2012. Some ethylene biosynthesis and AP2/ERF genes reveal a specific pattern of expression during somatic embryogenesis in Hevea brasiliensis. BMC Plant Biology, 12 (244), 20 p.

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Quartile : Q1, Sujet : PLANT SCIENCES

Abstract : Background: Ethylene production and signalling play an important role in somatic embryogenesis, especially for species that are recalcitrant in in vitro culture. The AP2/ERF superfamily has been identified and classified in Hevea brasiliensis. This superfamily includes the ERFs involved in response to ethylene. The relative transcript abundance of ethylene biosynthesis genes and of AP2/ERF genes was analysed during somatic embryogenesis for callus lines with different regeneration potential, in order to identify genes regulated during that process. Results: The analysis of relative transcript abundance was carried out by real-time RT-PCR for 142 genes. The transcripts of ERFs from group I, VII and VIII were abundant at all stages of the somatic embryogenesis process. Forty genetic expression markers for callus regeneration capacity were identified. Fourteen markers were found for proliferating calli and 35 markers for calli at the end of the embryogenesis induction phase. Sixteen markers discriminated between normal and abnormal embryos and, lastly, there were 36 markers of conversion into plantlets. A phylogenetic analysis comparing the sequences of the AP2 domains of Hevea and Arabidopsis genes enabled us to predict the function of 13 expression marker genes. Conclusions: This first characterization of the AP2/ERF superfamily in Hevea revealed dramatic regulation of the expression of AP2/ERF genes during the somatic embryogenesis process. The gene expression markers of proliferating callus capacity to regenerate plants by somatic embryogenesis should make it possible to predict callus lines suitable to be used for multiplication. Further functional characterization of these markers opens up prospects for discovering specific AP2/ERF functions in the Hevea species for which somatic embryogenesis is difficult. (Résumé d'auteur)

Mots-clés Agrovoc : Hevea brasiliensis, Biosynthèse, Embryogénèse somatique, Éthylène, Facteur de transcription, Régulation physiologique, Expression des gènes, Marqueur génétique, Régénération in vitro, Substance de croissance végétale

Classification Agris : F30 - Plant genetics and breeding
F02 - Plant propagation
F60 - Plant physiology and biochemistry

Champ stratégique Cirad : Axe 1 (2005-2013) - Intensification écologique

Auteurs et affiliations

  • Piyatrakul Piyanuch, CIRAD-BIOS-UMR AGAP (FRA)
  • Putranto Riza Arief, CIRAD-BIOS-UMR AGAP (FRA)
  • Martin Florence, CIRAD-BIOS-UMR AGAP (FRA)
  • Rio Maryannick, CIRAD-BIOS-UMR AGAP (FRA) ORCID: 0000-0002-4573-1371
  • Dessailly Florence, CIRAD-BIOS-UMR AGAP (FRA) ORCID: 0000-0001-7873-3974
  • Leclercq Julie, CIRAD-BIOS-UMR AGAP (FRA) ORCID: 0000-0001-8110-3762
  • Dufayard Jean-François, CIRAD-BIOS-UMR AGAP (FRA)
  • Lardet Ludovic, CIRAD-BIOS-UMR AGAP (FRA)
  • Montoro Pascal, CIRAD-BIOS-UMR AGAP (FRA)

Source : Cirad - Agritrop (https://agritrop.cirad.fr/567226/)

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