Natural resistance of the diploid Musa balbisiana Pisang Klutuk Wulung (PKW) to banana streak virus is probably driven by transcriptional gene silencing

Duroy Pierre-Olivier, Seguin Jonathan, Rajendran Rajeswaran, Laboureau Nathalie, Pooggin Mikhail, Iskra Caruana Marie-Line, Chabannes Matthieu. 2013. Natural resistance of the diploid Musa balbisiana Pisang Klutuk Wulung (PKW) to banana streak virus is probably driven by transcriptional gene silencing. In : 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Marais Armelle (ed.), Revers Frédéric (ed.). SFP, INRA. Paris : SFP, Résumé, 36. Rencontres de Virologie Végétale. 14, Aussois, France, 13 Janvier 2013/17 Janvier 2013.

Résumé : The genome of banana (Musa sp.) harbours multiple integrations of Banana streak virus (eBSV), whereas this badnavirus does not require integration for the replication of its ds DNA genome. Some endogenous BSV sequences (eBSV), only existing in the Musa balbisiana genome, are infectious by releasing a functional viral genome following stresses such as those existing in in vitro culture and interspecific crosses context. The structure of these eBSV is much longer than a single BSV genome, composed of viral fragments duplicated and more or less extensively rearranged. Wild M. balbisiana diploid genotypes (BB) such as Pisang Klutuk Wulung (PKW) harbour such infectious eBSV belonging to three widespread species of BSV (Goldfinger -BSGFV, Imové - BSImV and Obino l'Ewai - BSOLV) but are nevertheless resistant to any multiplication of BSV without any visible virus particles. In collaboration with the group headed by M. Pooggin (Basel, Switzerland), a deep sequencing of total siRNAs of PKW was performed using the Illumina ultra-high-throughput technology. We obtained for the first time, experimental evidence of virus-derived small RNA (vsRNA) from eBSOLV, eBSGFV and eBSImV by blasting sequences against the 3 BSV species genomes. vsRNA are enriched in 24-nt class thus eBSV in PKW genome are likely silenced at the transcriptional level. Interestingly, we show that hot and cold spots of vsRNA generation do not target similar viral sequences from one eBSV species to the other but are directly correlated with the structure of the integration. All together, those data seem indicate these eBSV induce a natural resistance driven by gene silencing mechanisms based on their complex molecular re-arranged structure which could lead to dsRNA formation. (Texte intégral)

Classification Agris : F30 - Génétique et amélioration des plantes
H20 - Maladies des plantes

Auteurs et affiliations

• Duroy Pierre-Olivier
• Seguin Jonathan, University of Basel (CHE)
• Rajendran Rajeswaran, University of Basel (CHE)
• Laboureau Nathalie, CIRAD-BIOS-UMR BGPI (FRA) ORCID: 0000-0002-0105-3919
• Pooggin Mikhail, University of Basel (CHE)
• Iskra Caruana Marie-Line, CIRAD-BIOS-UMR BGPI (FRA) ORCID: 0000-0003-4486-2449
• Chabannes Matthieu, CIRAD-BIOS-UMR BGPI (FRA) ORCID: 0000-0001-5754-5982

Source : Cirad - Agritrop (https://agritrop.cirad.fr/567999/)

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