Gomes Vitor H.F., IJff Stéphanie D., Raes Niels, Amaral Iêda Leão, Salomão Rafael P., de Souza Coelho Luiz, de Almeida Matos Francisca Dionízia, Castilho Carolina V., de Andrade Lima Filho Diogenes, López Dairon Cárdenas, Guevara Juan Ernesto, Magnusson William E, Phillips Oliver L., Wittmann Florian, de Jesus Veiga Carim Marcelo, Pires Martins Maria, Irume Victória Irume, Sabatier Daniel, Molino Jean-François, Banki Olaf, da Silva Guimarães José Renan, Pitman Nigel C.A., Fernandez Piedade Maria Teresa, Mendoza Abel Monteagudo, Garcia Luize Bruno, Venticinque Eduardo Martins, Moraes de Leão Novo Evlyn Márcia, Vargas Percy Núñez, Silva Thiago Sanna Freire, Manzatto Angelo Gilberto, Terborgh John, Costa Reis Neidiane Farias, Montero Juan Carlos, Casula Katia Regina, Marimon Beatriz Schwantes, Marimon-Junior Ben Hur, Honorio Coronado Eurídice N., Feldpausch Ted R., Duque Alvaro, Zartman Charles Eugene, Castaño Arboleda Nicolás, Killeen Timothy J., Mostacedo Bonifacio, Vasquez Rodolfo, Schöngart Jochen, Assis Rafael L., Medeiros Marcelo Brilhante, Fragomeni Simon Marcelo, Andrade Ana, Laurance William F., Camargo Jose Luis C., Demarchi Layon O., Laurance Susan G.W., de Sousa Farias Emmanuelle, Mendonça Nascimento Henrique Eduardo, Cardenas Revilla Juan David, Quaresma Adriano, Costa Flávia R.C, Guimarães Vieira Ima Célia, Barçante Ladvocat Cintra Bruno, Castellanos Hernán, Brienen Roel, Stevenson Pablo R., Feitosa Yuri, Duivenvoorden Joost F., Aymard Corredor Gerardo A., Mogollón Hugo F., Targhetta Natalia, Comiskey James A., Vicentini Alberto, Lopes Aline, Damasco Gabriel, Davila Nallarett, García-Villacorta Roosevelt, Levis Carolina, Schietti Juliana, Souza Priscila, Emilio Thaise, Alonso Alfonso, Neill David, Dallmeier Francisco, Ferreira Leandro V., Araujo-Murakami Alejandro, Praia Daniel, do Amaral Dário Dantas, Carvalho Fernanda Antunes, de Souza Fernanda Coelho, Feeley Kenneth J., Arroyo Luzmila, Pansonato Marcelo Petratti, Gribel Rogerio, Villa Boris, Licona Juan Carlos, Fine Paul V.A., Cerón Carlos, Baraloto Christopher, Jimenez Eliana, Stropp Juliana, Engel Julien, Silveira Marcos, Peñuela Mora Maria Cristina, Petronelli Pascal, et al.. 2018. Species Distribution Modelling: Contrasting presence-only models with plot abundance data. Scientific Reports, 8:1003, 12 p.
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Quartile : Q1, Sujet : MULTIDISCIPLINARY SCIENCES
Résumé : Species distribution models (SDMs) are widely used in ecology and conservation. Presence-only SDMs such as MaxEnt frequently use natural history collections (NHCs) as occurrence data, given their huge numbers and accessibility. NHCs are often spatially biased which may generate inaccuracies in SDMs. Here, we test how the distribution of NHCs and MaxEnt predictions relates to a spatial abundance model, based on a large plot dataset for Amazonian tree species, using inverse distance weighting (IDW). We also propose a new pipeline to deal with inconsistencies in NHCs and to limit the area of occupancy of the species. We found a significant but weak positive relationship between the distribution of NHCs and IDW for 66% of the species. The relationship between SDMs and IDW was also significant but weakly positive for 95% of the species, and sensitivity for both analyses was high. Furthermore, the pipeline removed half of the NHCs records. Presence-only SDM applications should consider this limitation, especially for large biodiversity assessments projects, when they are automatically generated without subsequent checking. Our pipeline provides a conservative estimate of a species' area of occupancy, within an area slightly larger than its extent of occurrence, compatible to e.g. IUCN red list assessments.
Mots-clés Agrovoc : modélisation, distribution des populations, biodiversité, écologie des populations, écologie forestière, peuplement forestier
Mots-clés géographiques Agrovoc : Amazonie
Mots-clés libres : Biodiversity, Ecological modelling
Classification Agris : F70 - Taxonomie végétale et phytogéographie
K01 - Foresterie - Considérations générales
Champ stratégique Cirad : Axe 2 (2014-2018) - Valorisation de la biomasse
Auteurs et affiliations
- Gomes Vitor H.F., MPEG (BRA)
- IJff Stéphanie D., Naturalis Biodiversity Center (NLD)
- Raes Niels, Naturalis Biodiversity Center (NLD)
- Amaral Iêda Leão, INPA (BRA)
- Salomão Rafael P., UFPA (BRA)
- de Souza Coelho Luiz, INPA (BRA)
- de Almeida Matos Francisca Dionízia, INPA (BRA)
- Castilho Carolina V., EMBRAPA (BRA)
- de Andrade Lima Filho Diogenes, INPA (BRA)
- López Dairon Cárdenas, Instituto Amazonico de Investigaciones Cientificas SINCHI (COL)
- Guevara Juan Ernesto, UC (USA)
- Magnusson William E, INPA (BRA)
- Phillips Oliver L., University of Leeds (GBR)
- Wittmann Florian, Karlsruhe Institute of Technology (DEU)
- de Jesus Veiga Carim Marcelo, IEPA (BRA)
- Pires Martins Maria, INPA (BRA)
- Irume Victória Irume, INPA (BRA)
- Sabatier Daniel, IRD (FRA)
- Molino Jean-François, INPA (BRA)
- Banki Olaf, Naturalis Biodiversity Center (NLD)
- da Silva Guimarães José Renan, IEPA (BRA)
- Pitman Nigel C.A., Field Museum of Natural History (USA)
- Fernandez Piedade Maria Teresa, INPA (BRA)
- Mendoza Abel Monteagudo, Jardin Botanico de Missouri (PER)
- Garcia Luize Bruno, UNESP (BRA)
- Venticinque Eduardo Martins, FURG (BRA)
- Moraes de Leão Novo Evlyn Márcia, INPE (BRA)
- Vargas Percy Núñez, Universidad Nacional de San Antonio Abad del Cusco (PER)
- Silva Thiago Sanna Freire, UNESP (BRA)
- Manzatto Angelo Gilberto, UNIR (BRA)
- Terborgh John, Duke University (USA)
- Costa Reis Neidiane Farias, UNIR (BRA)
- Montero Juan Carlos, IBIF (BOL)
- Casula Katia Regina, UNIR (BRA)
- Marimon Beatriz Schwantes, UNEMAT (BRA)
- Marimon-Junior Ben Hur, UNEMAT (BRA)
- Honorio Coronado Eurídice N., IIAP (PER)
- Feldpausch Ted R., University of Exeter (GBR)
- Duque Alvaro, Universidad Nacional de Colombia (COL)
- Zartman Charles Eugene, INPA (BRA)
- Castaño Arboleda Nicolás, Instituto Amazonico de Investigaciones Cientificas SINCHI (COL)
- Killeen Timothy J., Agteca-Amazonica (BOL)
- Mostacedo Bonifacio, UAGRM (BOL)
- Vasquez Rodolfo, Jardin Botanico de Missouri (PER)
- Schöngart Jochen, INPA (BRA)
- Assis Rafael L., INPA (BRA)
- Medeiros Marcelo Brilhante, EMBRAPA (BRA)
- Fragomeni Simon Marcelo, EMBRAPA (BRA)
- Andrade Ana, INPA (BRA)
- Laurance William F., James Cook University (AUS)
- Camargo Jose Luis C., INPA (BRA)
- Demarchi Layon O., INPA (BRA)
- Laurance Susan G.W., James Cook University (AUS)
- de Sousa Farias Emmanuelle, Instituto Leônidas Maria Deane (BRA)
- Mendonça Nascimento Henrique Eduardo, INPA (BRA)
- Cardenas Revilla Juan David, INPA (BRA)
- Quaresma Adriano, INPA (BRA)
- Costa Flávia R.C, INPA (BRA)
- Guimarães Vieira Ima Célia, MPEG (BRA)
- Barçante Ladvocat Cintra Bruno, INPA (BRA)
- Castellanos Hernán, Universidad Nacional Experimental de Guayana (VEN)
- Brienen Roel, University of Leeds (GBR)
- Stevenson Pablo R., Universidad de los Andes (COL)
- Feitosa Yuri, INPA (BRA)
- Duivenvoorden Joost F., University of Amsterdam (NLD)
- Aymard Corredor Gerardo A., Herbario Universitario (VEN)
- Mogollón Hugo F., Endangered Species Coalition (USA)
- Targhetta Natalia, INPA (BRA)
- Comiskey James A., National Park Service (USA)
- Vicentini Alberto, INPA (BRA)
- Lopes Aline, INPA (BRA)
- Damasco Gabriel, UC (USA)
- Davila Nallarett, UNICAMP (BRA)
- García-Villacorta Roosevelt, University of Edinburgh (GBR)
- Levis Carolina, INPA (BRA)
- Schietti Juliana, INPA (BRA)
- Souza Priscila, INPA (BRA)
- Emilio Thaise, INPA (BRA)
- Alonso Alfonso, Smithsonian Conservation Biology Institute (USA)
- Neill David, Universidad Estatal Amazónica (ECU)
- Dallmeier Francisco, Smithsonian Conservation Biology Institute (USA)
- Ferreira Leandro V., MPEG (BRA)
- Araujo-Murakami Alejandro, Museo de Historia Natural Noel Kempff Mercado (BOL)
- Praia Daniel, INPA (BRA)
- do Amaral Dário Dantas, MPEG (BRA)
- Carvalho Fernanda Antunes, INPA (BRA)
- de Souza Fernanda Coelho, INPA (BRA)
- Feeley Kenneth J., University of Miami (USA)
- Arroyo Luzmila, UAGRM (BOL)
- Pansonato Marcelo Petratti, INPA (BRA)
- Gribel Rogerio, JBRJ (BRA)
- Villa Boris, INPA (BRA)
- Licona Juan Carlos, IBIF (BOL)
- Fine Paul V.A., UC (USA)
- Cerón Carlos, Universidad Central del Ecuador (ECU)
- Baraloto Christopher, ICTB (USA)
- Jimenez Eliana, Universidad Nacional de Colombia (COL)
- Stropp Juliana, Federal University of Alagoas (BRA)
- Engel Julien, CIRAD-BIOS-UMR AMAP (FRA)
- Silveira Marcos, UFAC (BRA)
- Peñuela Mora Maria Cristina, Universidad Regional Amazónica Ikiam (ECU)
- Petronelli Pascal, CIRAD-ES-UMR Ecofog (GUF)
- et al.
Source : Cirad-Agritrop (https://agritrop.cirad.fr/597715/)
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