Association mapping of biomass and cell wall related traits in sorghum

Pot David, Trouche Gilles, Vaksmann Michel, Clerget Benoît, Bastianelli Denis, Chantereau Jacques, Maleyrat Julien, Rivallan Ronan, Bonnal Laurent, Rami Jean-François, Barrière Yves. 2011. Association mapping of biomass and cell wall related traits in sorghum. In : Conference Book XXII Eucarpia Maize and Sorghum Conference. Agricultural Institute Osijek. Opatija : Agricultural Institute Osijek, Résumé, 33. ISBN 978-953-97114-8-9 EUCARPIA. Conference of Maize and Sorghum : "Resources in Maize and Sorghum Breeding". 22, Opatija, Croatie, 19 Juin 2011/22 Juin 2011.

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Résumé : In addition to being the fifth cereal in terms of grain production, the interest of sorghum as a feed and energy crop is increasingly underlined. Selection of sorghum genotypes for fodder and energy production relies on an in-depth understanding of stem tissue organization and cell wall characteristics variability. Although histological analyses of two genotypes harboring contrasting stem diameter revealed similar tissue organizations and cell sizes, their kinetics of biomass degradation when treated with enzymatic cocktails were different, the largest stem diameter genotype presenting a faster degradation with a lower percentage of monosaccharide solubilised, suggesting differences in soluble sugar content and cell wall polymer content and accessibility. According to these results we then focus our attention on the cell wall composition. From a previous characterization of 410 sorghum accessions using near infrared reflectance spectroscopy, a panel of 13 genotypes maximizing the diversity of cell wall properties were subjected to FTIR analyses, klason lignin and p-hydroxycinnamic acids contents measurement, and determination of lignin monomeric composition. In parallel, saccharification efficiency of the cell walls was evaluated. These analyses revealed a significant genetic variability of cell wall saccharification yield which has been associated with the variability of the lignin content in the cell wall, the S monomers content in the uncondensed lignin part and the concentration in esterified p-coumaric acid. Finally, addition of an Alkali pre-treatment before the enzymatic treatment showed significant improvement of cell wall saccharification yield but contrasting responses of the genotypes analyzed in terms of final yield and degree of improvement.

Mots-clés libres : Sorghum, Cell wall, GWAS, Biochemistry, Forage

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