Combining AMMI and BLUP analysis to select high-yielding soybean genotypes in Benin

Etchikinto Agoyi Eric, Essèdjlo Ahomondji Symphorien, Yemadje Pierrot Lionel, Ayi Sergino, Ranaivoson Lalaina Bakotiana, Torres Guilherme Martin, da Fonseca Santos Michelle, Boulakia Stéphane, Chigeza Godfree, Assogbadjo Achille Ephrem, Diers Brian W., Sinsin Brice Augustin. 2024. Combining AMMI and BLUP analysis to select high-yielding soybean genotypes in Benin. Agronomy Journal, 20 p.

Résumé : Thirty soybean [Glycine max (L.) Merr.] genotypes, along with three checks, were evaluated over three seasons across five communes in Benin. The experiments were laid out in an alpha lattice design with three replicates. Additive multiplicative mean interaction (AMMI) and best linear unbiased predictor (BLUP) analysis were combined to assess differential agronomic performance and yield stability among genotypes. There was significant variation (p < 0.001) between genotypes for all traits, with highly significant environmental and genotype × environment interaction (GEI) effects on soybean grain yield (p < 0.001). The likelihood ratio test indicated that both genotype and interaction effects were highly significant (p < 0.001). The low R2 (0.21) for GEI reflected the presence of high residual variation in the GEI component, in contrast to the AMMI analysis of variance, which explained a high proportion of the GEI through the first two interaction principal component axes (52%). The very high value of the predictive accuracy (0.89) confirmed the model's reliability in selecting superior genotypes. The low (0.33) genotypic correlation between environments indicated that it was difficult to select superior genotypes for each environment. Based on the superiority index (weighted average absolute scores from BLUP for yield) of BLUP, simultaneous selection led to the identification of Jenguma 2.67 ± 0.06 t ha−1 as the most stable and productive genotype across environments, followed by Favour 2.34 ± 0.08 t ha−1, and Afayak 2.46 ± 0.08 t ha−1. The agronomic performance of soybean in this study suggested great potential for diversifying cotton-based cropping systems in Benin, thereby improving their sustainability. The effect of these soybean genotypes on the productivity of intercrop combinations and sequences of cash crops, such as cotton, is yet to be investigated.

Mots-clés Agrovoc : génotype, Glycine max, rendement des cultures, alpha lattice design [EN], culture intercalaire, sélection, intéraction génotype environnement, meilleure prédiction linéaire impartiale, caractère agronomique

Mots-clés géographiques Agrovoc : Bénin

Classification Agris : F30 - Génétique et amélioration des plantes
U10 - Informatique, mathématiques et statistiques

Champ stratégique Cirad : CTS 2 (2019-) - Transitions agroécologiques

Agences de financement hors UE : Programme d'Amélioration de la Productivité Agricole des Petits Exploitants, Islamic Development Bank, SIL

Auteurs et affiliations

• Etchikinto Agoyi Eric, UAC (BEN) - auteur correspondant
• Essèdjlo Ahomondji Symphorien, UAC (BEN)
• Yemadje Pierrot Lionel, CIRAD-PERSYST-UPR AIDA (BEN) ORCID: 0009-0009-4787-0963
• Ayi Sergino, UAC (BEN)
• Ranaivoson Lalaina Bakotiana, CIRAD-PERSYST-UPR AIDA (FRA) ORCID: 0000-0002-7305-921X
• Torres Guilherme Martin, University of Illinois (USA)
• da Fonseca Santos Michelle, University of Illinois (USA)
• Boulakia Stéphane, CIRAD-PERSYST-UPR AIDA (FRA) ORCID: 0000-0003-4331-1207
• Chigeza Godfree, CGIAR (NGA)
• Assogbadjo Achille Ephrem, UAC (BEN)
• Diers Brian W., University of Illinois (USA)
• Sinsin Brice Augustin, UAC (BEN)

Source : Cirad-Agritrop (https://agritrop.cirad.fr/609872/)

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