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The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars. Salojärvi Jarkko, Rambani Aditi, Yu Zhe, Guyot Romain, Strickler Susan R., Lepelley Maud, Wang Cui, Rajaraman Sitaram, Rastas Pasi, Zheng Chunfang, Santos Muñoz Daniella, Meidanis João, Rossi Paschoal Alexandre, Bawin Yves, Krabbenhoft Trevor J., Wang Zhen Qin, Fleck Steven J., Aussel Rudy, Bellanger Laurence, Charpagne Aline, Fournier Coralie, Kassam Mohamed, Lefebvre Gregory, Métairon Sylviane, Descombes Patrick, Rigoreau Michel, Stolte Jens, Hamon Perla, Couturon Emmanuel, Tranchant-Dubreuil Christine, Mukherjee Minakshi, Lan Tianying, Engelhardt Jan, Stadler Peter, De Lemos Samara Mireza Correia, Ivamoto Suzuki Suzana, Sumirat Ucu, Wai Ching Man, Dauchot Nicolas, Orozco-Arias Simon, Garavito Giovanny, Kiwuka Catherine, Musoli Pascal, Nalukenge Anne, Guichoux Erwan, Reinout Havinga, Smit Martin, Carretero-Paulet Lorenzo, Guerreiro Filho Oliveiro, Toma Braghini Masako, Padilha Lilian, Hiroshi Sera Gustavo, Ruttink Tom, Henry Robert, Marraccini Pierre, et al.. 2024. Nature Genetics, 56 : 721-731.

VegAnn, Vegetation Annotation of multi-crop RGB images acquired under diverse conditions for segmentation. Madec Simon, Irfan Kamran, Velumani Kaaviya, Baret Frédéric, David Etienne, Daubige Gaetan, Bernigaud Samatan Lucas, Serouart Mario, Smith Daniel, James Chrisbin, Camacho Fernando, Guo Wei, De Solan Benoit, Chapman Scott, Weiss Marie. 2023. Scientific Data, 10:302, 12 p.

Genetic structuring of parental populations of coffee (Coffea canephora Pierre ex A. Froehner) breeding in Côte d'Ivoire using SNP markers. Gnapi Diane Estelle, N'Da Pokou Désiré, Legnaté Hyacinthe, Dapeng Zhang, Akaffou Doffou Sélastique, Koffi Kouamé Cyrille, Bertrand Benoît, Montagnon Christophe, N'Guetta Assanvo Simon-Pierre. 2022. Biotechnologie, Agronomie, Société et Environnement, 26 (3) : 178-190.

Multi-year analyses on three populations reveal the first stable QTLs for tolerance to rain-induced fruit cracking in sweet cherry (Prunus avium L.). Quero-Garcia José, Letourmy Philippe, Campoy José Antonio, Branchereau Camille, Malchev Svetoslav, Barreneche Teresa, Dirlewanger Elisabeth. 2021. Horticulture Research, 8:136, 16 p.

Transforming a traditional commons-based seed system through collaborative networks of farmer seed-cooperatives and public breeding programs: The case of sorghum in Mali. Rattunde Fred, Weltzien Eva, Sidibe Mamourou, Diallo Abdoulaye, Diallo Bocar, Vom Brocke Kirsten, Nebie Baloua, Touré Aboubacar, Traoré Yalaly, Sidibé Amadou, Diallo Chiaka, Diakité Soriba, Bretaudeau Alhousseïni, Christinck Anja. 2021. Agriculture and Human Values, 38 (2) : 561-578.

A review of varietal change in roots, tubers and bananas: consumer preferences and other drivers of adoption and implications for breeding. Thiele Graham, Dufour Dominique, Vernier Philippe, Mwanga Robert O. M., Parker Monica L., Schulte Geldermann Elmar, Teeken Béla, Wossen Tesfamicheal, Gotor Elisabetta, Kikulwe Enoch M., Tufan Hale, Sinelle Sophie, Kouakou Amani Michel, Friedmann Michael, Polar Vivian, Hershey Clair. 2021. International Journal of Food Science and Technology, 56 (3), n.spéc. Consumers have their say: Assessing preferred quality traits of roots, tubers and cooking bananas, and implications for breeding : 1076-1092.

Characterization of semi-arid Chadian sweet sorghum accessions as potential sources for sugar and ethanol production. Naoura Gapili, Emendack Yves, Baloua Nébié, Vom Brocke Kirsten, Mahamat Alhabib Hassan, Sawadogo Nerbewende, Doyam Nodjasse Amos, Djinodji Reoungal, Trouche Gilles, Haydee Laza Echevarria. 2020. Scientific Reports, 10:14947, 11 p.

Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate. Abrouk Michael, Ibrahim Ahmed Hanin, Cubry Philippe, Simoníková Denisa, Cauet Stéphane, Pailles Yveline, Bettgenhaeuser Jan, Gapa Liubov, Scarcelli Nora, Couderc Marie, Zekraoui Leïla, Kathiresan Nagarajan, Cizkova Jana, Hribova Eva, Dolozel Jaroslav, Arribat Sandrine, Berges Hélène, Wieringa Jan J., Gueye Mathieu, Kane Ndjido Ardo, Leclerc Christian, Causse Sandrine, Vancoppenolle Sylvie, Billot Claire, Wicker Thomas, Vigouroux Yves, Barnaud Adeline, Krattinger Simon G.. 2020. Nature Communications, 11:4488, 13 p.

SHiNeMaS: a web tool dedicated to seed lots history, phenotyping and cultural practices. De Oliveira Yannick, Burlot Laura, Dawson Julie C., Goldringer Isabelle, Madi Darkawi, Rivière Pierre, Steinbach Delphine, Van Frank Gaëlle, Thomas Mathieu. 2020. Plant Methods, 16:98, 9 p.

BrAPI—an application programming interface for plant breeding applications. Selby Peter, Abbeloos Rafael, Backlund Jan Erik, Basterrechea Salido Martin, Bauchet Guillaume, Benites-Alfaro Omar E., Birkett Clay, Calaminos Viana C., Carceller Pierre, Cornut Guillaume, Vasques Costa Bruno, Edwards Jeremy D., Finkers Richard, Yanxin Gao Star, Ghaffar Mehmood, Glaser Philip, Guignon Valentin, Hok Puthick, Kilian Andrzej, König Patrick, Lagare Jack Elendil B., Lange Matthias, Laporte Marie-Angélique, Larmande Pierre, LeBauer David S., Lyon David A., Marshall David S., Matthews Dave, Milne Iain, Mistry Naymesh, Morales Nicolas, Mueller Lukas, Neveu Pascal, Papoutsoglou Evangelia, Pearce Brian, Perez-Masias Ivan, Pommier Cyril, Ramírez-González Ricardo H., Rathore Abhishek, Raquel Angel Manica, Raubach Sebastian, Rife Trevor, Robbins Kelly, Rouard Mathieu, Sarma Chaitanya, Scholz Uwe, Sempere Guilhem, et al.. 2019. Bioinformatics, 35 (20) : 4147-4155.

Characterization of worldwide olive germplasm banks of Marrakech (Morocco) and Córdoba (Spain): Towards management and use of olive germplasm in breeding programs. El Bakkali Ahmed, Essalouh Laila, Tollon Christine, Rivallan Ronan, Mournet Pierre, Moukhli Abdelmajid, Zaher Hayat, Mekkaoui Abderrahmane, Hadidou Amal, Sikaoui Lhassane, Khadari Bouchaib. 2019. PloS One, 14 (10):e0223716, 28 p.

Exploiting sorghum genetic diversity for enhanced aluminum tolerance: Allele mining based on the AltSB locus. Hufnagel Maciel Bárbara, Guimaraes Claudia Teixeira, Craft Eric J., Shaff Jon E., Schaffert Robert E., Kochian Leon V., Magalhaes Jurandir V.. 2018. Scientific Reports, 8:10094, 13 p.

Genomic selection in rice: lessons learned from a large set of proof-of-concept studies embedded in current breeding programs. Ahmadi Nourollah, Bartholome Jérôme, Cao Tuong-Vi, Courtois Brigitte, Grenier Cécile, Taillebois James E.. 2018. . IRRI. Singapore : IRRI, Résumé, 1 p. International Rice Congress 2018 (IRC 2018). 5, Singapour, Singapour, 15 Octobre 2018/17 Octobre 2018.