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Old foe, New host: Epidemiology, genetic diversity, and pathogenic characterization of maize streak virus in rice fields from Burkina Faso. Magdy Ibrahim Fouad Noun, Barro Mariam, Bangratz Martine, Sérémé Drissa, Filloux Denis, Fernandez Emmanuel, Julian Charlotte, Saïbou Nignan, Kassankogno Abalo Itolou, Guigma Abdoul Kader, Roumagnac Philippe, Wonni Issa, Tollenaere Charlotte, Poulicard Nils. 2025. Phytobiomes Journal, 9 (1) : 32-44.

Consensus statement from the first RdRp Summit: Advancing RNA virus discovery at scale across communities. Charon Justine, Olendraite Ingrida, Forgia Marco, Chong Li Chuin, Hillary Luke S., Roux Simon, Kupczok Anne, Debat Humberto, Sakaguchi Shoichi, Tahzima Rachid, Nakagawa So, Babaian Artem, Abroi Aare, Bejerman Nicolás, Ben Mansour Karima, Brown Katherine, Butkovic Anamarija, Cervera Amelia, Charriat Florian, Chen Guowei, Chiba Yuto, De Coninck Lander, Demina Tatiana, Dominguez-Huerta Guillermo, Dubrulle Jeremy, Gutiérrez Serafin, Harvey Erin, Jayaraj Mallika Fhilmar Raj, Karapliafis Dimitris, Lim Shen Jean, Kasibhatla Sunitha Manjari, Mifsud Jonathon, Nishimura Yosuke, Ortiz-Baez Ayda Susana, Raco Milica, Rivero Ricardo, Sadiq Sabrina, Saghaei Shahram, San James Emmanuel, Shaikh Hisham Mohammed, Sieradzki Ella Tali, Sullivan Matthew B., Sun Yanni, Wille Michelle, Wolf Yuri I., Zrelovs Nikita, Neri Uri. 2024. Frontiers in Virology, 4, 10 p.

First report of maize streak Reunion virus infecting rice in Burkina Faso. Bangratz Martine, Barro Mariam, Fouad Noun, Sérémé Drissa, Filloux Denis, Fernandez Emmanuel, Julian Charlotte, Kassankogno Abalo Itolou, Guigma Abdoul Kader, Roumagnac Philippe, Wonni Issa, Tollenaere Charlotte, Poulicard Nils. 2024. New Disease Reports, 50 (2):e70007, 3 p.

Increase of niche filling with increase of host richness for plant-infecting mastreviruses. Ben Chehida Sélim, Devi Bunwaree Heemee, Hoareau Murielle, Moubset Oumaima, Julian Charlotte, Blondin Laurence, Filloux Denis, Lavergne Christophe, Roumagnac Philippe, Varsani Arvind, Martin Darren Patrick, Lett Jean-Michel, Lefeuvre Pierre. 2024. Virus Evolution, 10 (1):veae107, 11 p.

Virome release of an invasive exotic plant species in southern France. Moubset Oumaima, Filloux Denis, Fontes Hugo, Julian Charlotte, Fernandez Emmanuel, Galzi Serge, Blondin Laurence, Ben Chehida Sélim, Lett Jean-Michel, Mesleard François, Kraberger Simona, Custer Joy M., Salywon Andrew M., Makings Elizabeth, Marais Armelle, Chiroleu Frédéric, Lefeuvre Pierre, Martin Darren Patrick, Candresse Thierry, Varsani Arvind, Ravigné Virginie, Roumagnac Philippe. 2024. Virus Evolution, 10 (1):veae025, 16 p.

At least seven distinct rotavirus genotype constellations in bats with evidence of reassortment and zoonotic transmissions. Simsek Ceren, Corman Victor Max, Everling Hermann Ulrich, Lukashev Alexander N., Rasche Andrea, Maganga Gaël Darren, Binger Tabea, Jansen Daan, Beller Leen, Deboutte Ward, Gloza-Rausch Florian, Seebens-Hoyer Antje, Yordanov Stoian, Sylverken Augustina, Oppong Samuel, Adu Sarkodie Yaw, Vallo Peter, Leroy Eric M., Bourgarel Mathieu, Yinda Kwe Claude, Van Ranst Eric, Drosten Christian, Drexler Jan Felix, Matthijnssens Jelle. 2021. Mbio, 12 (1):e02755-20, 17 p.

Characterisation of the viral community associated with the Alfalfa Weevil (Hypera postica) and its host plant, Alfalfa (Medicago sativa). François Sarah, Antoine-Lorquin Aymeric, Kulikowski Maximilien, Frayssinet Marie, Filloux Denis, Fernandez Emmanuel, Roumagnac Philippe, Froissart Rémy, Ogliastro Mylène. 2021. Viruses, 13 (5):791, 17 p.

Comparison of the virome of quarantined sugarcane varieties and the virome of grasses growing near the quarantine station. Daugrois Jean-Heinrich, Filloux Denis, Julian Charlotte, Claude Lisa, Ferdinand Romain, Fernandez Emmanuel, Fontes Hugo, Rott Philippe, Roumagnac Philippe. 2021. Viruses, 13 (5):922, 17 p.

Nanopore sequencing is a credible alternative to recover complete genomes of geminiviruses. Ben Chehida Sélim, Filloux Denis, Fernandez Emmanuel, Moubset Oumaima, Hoareau Murielle, Julian Charlotte, Blondin Laurence, Lett Jean-Michel, Roumagnac Philippe, Lefeuvre Pierre. 2021. Microorganisms, 9:903, 15 p.