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Number of items: 27.

Journal article

Novel circular DNA viruses associated with Apiaceae and Poaceae from South Africa and New Zealand. Richet Cécile, Kraberger Simona, Filloux Denis, Bernardo Pauline, Harkins Gordon William, Martin Darren Patrick, Roumagnac Philippe, Varsani Arvind. 2019. Archives of Virology, 164 (1) : pp. 237-242.
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Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. Bernardo Pauline, Charles-Dominique Tristan, Barakat Mohamed, Ortet Philippe, Fernandez Emmanuel, Filloux Denis, Hartnady Penelope, Rebelo Tony A., Cousins Stephen, Mesleard François, Cohez Damien, Yaverkovski Nicole, Varsani Arvind, Harkins Gordon William, Peterschmitt Michel, Malmstrom Carolyn, Martin Darren Patrick, Roumagnac Philippe. 2018. ISME Journal, 12 : pp. 174-184.
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Genome sequences of a capulavirus infecting Plantago lanceolata in the Aland archipelago of Finland. Susi Hanna, Laine Anna-Liisa, Filloux Denis, Kraberger Simona, Farkas Kata, Bernardo Pauline, Frilander Mikko J., Martin Darren Patrick, Varsani Arvind, Roumagnac Philippe. 2017. Archives of Virology, 162 (7) : pp. 2041-2045.
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Molecular characterization and prevalence of two capulaviruses: Alfalfa leaf curl virus from France and Euphorbia caput-medusae latent virus from South Africa. Bernardo Pauline, Muhire Brejnev, François Sarah, Deshoux Maëlle, Hartnady Penelope, Farkas Kata, Kraberger Simona, Filloux Denis, Fernandez Emmanuel, Galzi Serge, Ferdinand Romain, Granier Martine, Marais Armelle, Monge Blasco Pablo, Candresse Thierry, Escriu Fernando, Varsani Arvind, Harkins Gordon William, Martin Darren Patrick, Roumagnac Philippe. 2016. Virology, 493 : pp. 142-153.
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Alfalfa leaf curl virus: an aphid-transmitted geminivirus. Roumagnac Philippe, Granier Martine, Bernardo Pauline, Deshoux Maëlle, Ferdinand Romain, Galzi Serge, Fernandez Emmanuel, Julian Charlotte, Abt Isabelle, Filloux Denis, Mesleard François, Varsani Arvind, Blanc Stéphane, Martin Darren Patrick, Peterschmitt Michel. 2015. Journal of Virology, 89 (18) : pp. 9683-9688.
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Identification of novel Bromus- and Trifolium-associated circular DNA viruses. Kraberger Simona, Farkas Kata, Bernardo Pauline, Booker Cameron, Argüello-Astorga Gerardo, Mesleard François, Martin Darren Patrick, Roumagnac Philippe, Varsani Arvind. 2015. Archives of Virology, 160 (5) : pp. 1303-1311.
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Appearances can be deceptive: Revealing a hidden viral infection with deep sequencing in a plant quarantine Context. Candresse Thierry, Filloux Denis, Muhire Brejnev, Julian Charlotte, Galzi Serge, Fort Guillaume, Bernardo Pauline, Daugrois Jean-Heinrich, Fernandez Emmanuel, Martin Darren Patrick, Varsani Arvind, Roumagnac Philippe. 2014. PloS One, 9 (7):e102945, 13 p.
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A novel itera-like densovirus isolated by viral metagenomics from the sea barley Hordeum marinum. François Sarah, Bernardo Pauline, Filloux Denis, Roumagnac Philippe, Yaverkovski Nicole, Froissart Rémi, Ogliastro Mylène. 2014. Genome Announcements, 2 (6):e01196, 2 p.
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Identification and characterisation of a highly divergent geminivirus: Evolutionary and taxonomic implications. Bernardo Pauline, Golden Michael, Akram Mohammad, Naimuddin, Nadarajan Nagaswamy, Fernandez Emmanuel, Granier Martine, Rebelo Anthony, Peterschmitt Michel, Martin Darren Patrick, Roumagnac Philippe. 2013. Virus Research, 177 (1) : pp. 35-45.
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Métagénomique virale et pathologie Une histoire récente. Bernardo Pauline, Albina Emmanuel, Eloit Marc, Roumagnac Philippe. 2013. MS - Médecine Sciences, 29 (5) : pp. 501-508.
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Book chapter

From spatial metagenomics to molecular characterization of plant viruses: A geminivirus case study. Claverie Sohini, Bernardo Pauline, Kraberger Simona, Hartnady Penelope, Lefeuvre Pierre, Lett Jean-Michel, Galzi Serge, Filloux Denis, Harkins Gordon William, Varsani Arvind, Martin Darren Patrick, Roumagnac Philippe. 2018. In : Environmental virology and virus ecology. Malmstrom Carolyn M. (ed.). Burlington : Academic Press, pp. 55-83. (Advances in Virus Research, 101) ISBN 978-0-12-814415-2
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Paper with proceedings

Geo-metagenomics: deciphering the spatial biodiversity of plant viruses associated with the unique fynbos ecosystem of Southern Africa and its neighbouring agro-ecosystem. Bernardo Pauline, Ortet Philippe, Barakat Mohamed, Rebelo Anthony, Cousins Stephen, Fernandez Emmanuel, Peterschmitt Michel, Filloux Denis, Varsani Arvind, Martin Darren Patrick, Roumagnac Philippe. 2013. In : EMBO Workshop Green Viruses, from Gene to Landscape, 7-11 September 2013, Hyères-les-Palmiers, France : programme and abstracts book. CNRS, UMR BGPI. s.l. : s.n., Résumé, p. 43. EMBO Workshop Green Viruses, from Gene to Landscape, Hyères-les-Palmier, France, 7 September 2013/11 September 2013.
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Poster

Metagenomics-based discovery and molecular characterization of novel geminiviruses from two Mediterranean-climate biodiversity hotspots. [P57]. Galzi Serge, Bernardo Pauline, Fernandez Emmanuel, Julian Charlotte, Ferdinand Romain, Harkins Gordon William, Peterschmitt Michel, Martin Darren Patrick, Filloux Denis, Roumagnac Philippe. 2017. In : Livre des résumés des 16 ème Rencontres de virologie végétale. CIRAD, CNRS, INRA, IRD, SFP. Aussois : CIRAD-CNRS, p. 118. Rencontres de virologie végétale, Aussois, France, 15 January 2017/19 January 2017.
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Spatial metagenomics illuminate the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. Roumagnac Philippe, Bernardo Pauline, Charles-Dominique Tristan, Fernandez Emmanuel, Filloux Denis, Ortet Philippe, Barakat Mohamed, Rebelo Tony A., Cousins Stephen, Mesleard François, Cohez Damien, Yaverkovski Nicole, Varsani Arvind, Harkins Gordon William, Peterschmitt Michel, Malmstrom Carolyn M., Martin Darren Patrick. 2017. . Paris : INRA, p. 93. International Conference on Holobionts, Paris, France, 19 April 2017/21 April 2017.
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Using preserved herbarium specimens to analyse past viral diversity: preliminary methodological results. [P53]. Julian Charlotte, Fernandez Emmanuel, Lefeuvre Pierre, Lett Jean-Michel, Bernardo Pauline, Malmstrom Carolyn M., Martin Darren Patrick, Filloux Denis, Roumagnac Philippe. 2017. In : Livre des résumés des 16 ème Rencontres de virologie végétale. CIRAD, CNRS, INRA, IRD, SFP. Aussois : CIRAD-CNRS, p. 114. Rencontres de virologie végétale, Aussois, France, 15 January 2017/19 January 2017.
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Looking for the vector of the latest discovered geminivirus genus, Capulavirus. [P.48]. Bernardo Pauline, Deshoux Maëlle, Granier Martine, Ferdinand Romain, Galzi Serge, Fernandez Emmanuel, Blanc Stéphane, Filloux Denis, Peterschmitt Michel, Roumagnac Philippe. 2015. In : 15èmes Rencontres de Virologie Végétale, Aussois, France, 18-22 janvier 2015. CIRAD ; IRD. s.l. : s.n., Résumé, p. 106. Rencontres de virologie végétale. 15, Aussois, France, 18 January 2015/22 January 2015.
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A new genus-level geminivirus lineage isolated from the South African fynbos. Bernardo Pauline, Fernandez Emmanuel, Granier Martine, Urbino Cica, Peterschmitt Michel, Martin Darren Patrick, Roumagnac Philippe. 2011. In : 4th Plant Virus Ecology Network Workshop (PVEN), Montpellier, France, May 30 to June 1, 2011. s.l. : s.n., 1 p. Plant Virus Ecology Network Workshop. 4, Montpellier, France, 30 May 2011/1 June 2011.
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Paper without proceedings

Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. O13. Bernardo Pauline, Charles-Dominique Tristan, Barakat Mohamed, Ortet Philippe, Fernandez Emmanuel, Filloux Denis, Hartnady Penelope, Rebelo Tony A., Cousins Stephen, Mesleard François, Cohez Damien, Yaverkovski Nicole, Varsani Arvind, Harkins Gordon William, Peterschmitt Michel, Malmstrom Carolyn, Martin Darren Patrick, Roumagnac Philippe. 2018. In : Book of abstract Pathobiome 2018. INRA. Ajaccio : INRA, Résumé, pp. 25-26. Pathobiome, Ajaccio, France, 18 March 2018/20 March 2018.
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Characterization of novel, highly divergent geminiviruses and insights into the evolutionary history of geminiviruses. Bernardo Pauline, Ortet Philippe, Barakat Mohamed, Rebelo Anthony, Cousins Stephen, Fernandez Emmanuel, Mesleard François, Peterschmitt Michel, Filloux Denis, Varsani Arvind, Martin Darren Patrick, Roumagnac Philippe. 2013. In : 7th International Geminvirus Symposium and 5th International ssDNA Comparative Virology Workshop, Hangzhou, China, November 3-9, 2013. s.l. : s.n., Résumé, 1 p. International Geminvirus Symposium. 7, Hangzhou, Chine, 3 November 2013/9 November 2013.
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Diverse circular single-stranded DNA viruses discovered from research greenhouses and agro-ecosystems. Fort Guillaume, Bernardo Pauline, Fernandez Emmanuel, Galzi Serge, Filloux Denis, Roumagnac Philippe. 2013. In : 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Marais Armelle (ed.), Revers Frédéric (ed.). SFP, INRA. Paris : SFP, Résumé, p. 66. Rencontres de Virologie Végétale. 14, Aussois, France, 13 January 2013/17 January 2013.
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Geo-metagenomics: deciphering the spatial biodiversity of ssDNA viruses associated with Western Cape and Camargue agroecosystems. Bernardo Pauline, Ortet Philippe, Barakat Mohamed, Rebelo Anthony, Cousins Stephen, Fernandez Emmanuel, Mesleard François, Peterschmitt Michel, Filloux Denis, Varsani Arvind, Martin Darren Patrick, Roumagnac Philippe. 2013. In : 7th International Geminvirus Symposium and 5th International ssDNA Comparative Virology Workshop, Hangzhou, China, November 3-9, 2013. s.l. : s.n., Résumé, 1 p. International Geminvirus Symposium. 7, Hangzhou, Chine, 3 November 2013/9 November 2013.
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Improvement of three nucleic acid isolation protocols for an overall diagnosis of viruses on six vegetative propagated plants. Julian Charlotte, Bernardo Pauline, Fernandez Emmanuel, Galzi Serge, Grisoni Michel, Da Silva Mendoça D.M., Pavis Claudie, Roumagnac Philippe, Filloux Denis. 2013. In : 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Marais Armelle (ed.), Revers Frédéric (ed.). SFP, INRA. Paris : SFP, Résumé, p. 75. Rencontres de Virologie Végétale. 14, Aussois, France, 13 January 2013/17 January 2013.
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Molecular characterization of Euphorbia caput-medusae stunt virus: Evidence for the existence of a new genus within the family Geminiviridae. Bernardo Pauline, Fernandez Emmanuel, Granier Martine, Golden Michael, Rebelo Tony A., Peterschmitt Michel, Martin Darren Patrick, Roumagnac Philippe. 2013. In : 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Marais Armelle (ed.), Revers Frédéric (ed.). SFP, INRA. Paris : SFP, Résumé, p. 9. Rencontres de Virologie Végétale. 14, Aussois, France, 13 January 2013/17 January 2013.
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New insights into the evolutionary history of geminiviruses derived through the discovery of divergent viruses isolated from wild plants. Bernardo Pauline, Golden Michael, Mohd A., Fernandez Emmanuel, Granier Martine, Rebelo A.G., Peterschmitt Michel, Martin Darren Patrick, Roumagnac Philippe. 2013. In : 1st International Conference Wild Plant Pathosystems (WPP 2013), Olomouc, République Tchèque, 2-5 July 2013. s.l. : s.n., Résumé, 1 p. International Conference Wild Plant Pathosystems, Olomouc, République tchèque, 2 July 2013/5 July 2013.
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Pathology and viral metagenomics, a recent history. Bernardo Pauline, Fernandez Emmanuel, Filloux Denis, Albina Emmanuel, Eloit Marc, Roumagnac Philippe. 2013. In : 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Marais Armelle (ed.), Revers Frédéric (ed.). SFP, INRA. Paris : SFP, Résumé, p. 20. Rencontres de Virologie Végétale. 14, Aussois, France, 13 January 2013/17 January 2013.
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A new genus-level geminivirus lineage isolated from the South African fynbos. Bernardo Pauline. 2011. In : Workshop 2011 du Réseau Evolution Virale (REV), 6-7 octobre 2011, Montpellier, France. Rémy Froissart, Samuel Alain. s.l. : s.n., Résumé, p. 6. Workshop 2011 du Réseau Evolution Virale (REV), Montpellier, France, 6 October 2011/7 October 2011.
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Thesis

Ecologie, diversité, et découverte de phytovirus à l'échelle de deux agro-écosystèmes dans un cadre spatio-temporel à l'aide de la géo-métagénomique. Bernardo Pauline. 2014. Montpellier : UM2, 278 p. Thèse de doctorat : Microbiologie parasitologie : Université Montpellier 2
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This list was generated on Sun Sep 20 09:54:33 2020 CEST.