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Migration of humans fleeing conflict in the Lake Chad region may increase pressures on natural resources in Lake Fitri (Chad): A case study on waterbirds. Carenton Nicolas, Defos du Rau Pierre, Saleh Wachoum Abakar, Ducros Delphine, Suet Marie, Deschamps Clémence, Betoloum Maxime Rotoudjimbaye, Birard Julien, Djimasngar M' Baïti Narcisse, Kayser Yves, Petersen Ib Krag, Dias Jaime, Wachoum Mahamat Adoum, Portier Bruno, Koumbraït Audrey Mbagogo, Le Bel Sébastien, Mondain-Monval J.Y.. 2024. Journal of Applied Ecology, 13 p.

Virome release of an invasive exotic plant species in southern France. Moubset Oumaima, Filloux Denis, Fontes Hugo, Julian Charlotte, Fernandez Emmanuel, Galzi Serge, Blondin Laurence, Ben Chehida Sélim, Lett Jean-Michel, Mesleard François, Kraberger Simona, Custer Joy M., Salywon Andrew M., Makings Elizabeth, Marais Armelle, Chiroleu Frédéric, Lefeuvre Pierre, Martin Darren Patrick, Candresse Thierry, Varsani Arvind, Ravigné Virginie, Roumagnac Philippe. 2024. Virus Evolution, 10 (1):veae025, 16 p.

Virome release of an invasive exotic plant species in Southern France. Moubset Oumaima, Filloux Denis, Fontes Hugo, Julian Charlotte, Fernandez Emmanuel, Claude Lisa, Galzi Serge, Chiroleu Frédéric, Mesleard François, Kraberger Simona, Custer Joy M., Salywon Andrew M., Makings Elizabeth, Martin Patrick Darren, Varsani Arvind, Ravigne Virginie, Roumagnac Philippe. 2023. In : 12th International Congress of Plant Pathology (ICPP 2023): One health for all plants, crops and trees. Book of abstracts. ISPP, SFP. Lyon : ISPP, Résumé, 1081-1082. International Conference on Plant Pathology (ICPP 2023). 12, Lyon, France, 20 Août 2023/25 Août 2023.

Comparison of the virome of quarantined sugarcane varieties and the virome of grasses growing near the quarantine station. Daugrois Jean-Heinrich, Filloux Denis, Julian Charlotte, Claude Lisa, Ferdinand Romain, Fernandez Emmanuel, Fontes Hugo, Rott Philippe, Roumagnac Philippe. 2021. Viruses, 13 (5):922, 17 p.

Evaluating functional dispersal in a nest ectoparasite and its eco-epidemiological implications. Rataud Amalia, Dupraz Marlene, Toty Céline, Blanchon Thomas, Vittecoq Marion, Choquet Rémi, McCoy Karen D.. 2020. Frontiers in Veterinary Science, 7:570157, 9 p.

A genomic map of climate adaptation in Mediterranean cattle breeds. Flori Laurence, Moazami Goudarzi Katayoun, Alary Véronique, Araba Abdelillah, Boujenane Ismail, Boushaba Nadjet, Casabianca François, Casu Sara, Ciampolini Roberta, Coeur d'Acier Armelle, Coquelle Corinne, Delgado Juan-Vicente, El Beltagy Ahmed, Hadjipavlou Georgia, Jousselin Emmanuelle, Landi Vincenzo, Lauvie Anne, Lecomte Philippe, Ligda Christina, Marinthe Caroline, Martinez Amparo, Mastrangelo Salvatore, Menni Dalal, Moulin Charles-Henri, Osman Mona-Abdelzaher, Pineau Olivier, Portolano Baldassare, Rodellar Clementina, Saïdi-Mehtar Nadhira, Sechi Tiziana, Sempere Guilhem, Thevenon Sophie, Tsiokos Dimitrios, Laloë Denis, Gautier Mathieu. 2019. Molecular Ecology, 28 (5) : 1009-1029.

Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. Bernardo Pauline, Charles-Dominique Tristan, Barakat Mohamed, Ortet Philippe, Fernandez Emmanuel, Filloux Denis, Hartnady Penelope, Rebelo Tony A., Cousins Stephen, Mesleard François, Cohez Damien, Yaverkovski Nicole, Varsani Arvind, Harkins Gordon William, Peterschmitt Michel, Malmstrom Carolyn, Martin Darren Patrick, Roumagnac Philippe. 2018. ISME Journal, 12 : 174-184.

Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. O13. Bernardo Pauline, Charles-Dominique Tristan, Barakat Mohamed, Ortet Philippe, Fernandez Emmanuel, Filloux Denis, Hartnady Penelope, Rebelo Tony A., Cousins Stephen, Mesleard François, Cohez Damien, Yaverkovski Nicole, Varsani Arvind, Harkins Gordon William, Peterschmitt Michel, Malmstrom Carolyn, Martin Darren Patrick, Roumagnac Philippe. 2018. In : Book of abstract Pathobiome 2018. INRA. Ajaccio : INRA, Résumé, 25-26. Pathobiome, Ajaccio, France, 18 Mars 2018/20 Mars 2018.

Nanovirus‐alphasatellite complex identi ed in Vicia cracca in the Rhône delta region of France. Gallet Romain, Kraberger Simona, Filloux Denis, Galzi Serge, Fontes Hugo, Martin Darren Patrick, Varsani Arvind, Roumagnac Philippe. 2018. Archives of Virology, 163 (3) : 695-700.

Interconnected place-based social-ecological research can inform global sustainability. Balvanera Patricia, Calderón-Contreras Rafael, Castro Antonio J., Felipe-Lucia María R., Geijzendorffer Ilse R., Jacobs Sander, Martín-López Berta, Arbieu Ugo, Ifejika Speranza Chinwe, Locatelli Bruno, Pérez Harguindeguy Natalia, Ruiz Mercado Ilse, Spierenburg Marja, Vallet Ameline, Lynes Laura, Gillson Lindsey. 2017. Current Opinion in Environmental Sustainability, 29 : 1-7.

Population structure of the soft tick Ornithodoros maritimus and its associated infectious agents within a colony of its seabird host Larus michahellis. Dupraz Marlene, Toty Céline, Devillers Elodie, Blanchon Thomas, Elguero Eric, Vittecoq Marion, Moutailler Sara, McCoy Karen D.. 2017. International Journal for Parasitology. Parasites and Wildlife, 6 (2) : 122-130.

Spatial metagenomics illuminate the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. Roumagnac Philippe, Bernardo Pauline, Charles-Dominique Tristan, Fernandez Emmanuel, Filloux Denis, Ortet Philippe, Barakat Mohamed, Rebelo Tony A., Cousins Stephen, Mesleard François, Cohez Damien, Yaverkovski Nicole, Varsani Arvind, Harkins Gordon William, Peterschmitt Michel, Malmstrom Carolyn M., Martin Darren Patrick. 2017. . Paris : INRA, 93. International Conference on Holobionts, Paris, France, 19 Avril 2017/21 Avril 2017.

Participatory integrated assessment of scenarios for organic farming at different scales in Camargue, France. Delmotte Sylvestre, Barbier Jean-Marc, Mouret Jean Claude, Le Page Christophe, Wery Jacques, Chauvelon Philippe, Sandoz Alain, Lopez Ridaura Santiago. 2016. Agricultural Systems, 143 : 147-158.

Adaptation of Mediterranean bovine livestock to climate constraints. Genetic diversity and breeding systems. Flori Laurence, Moazami Goudarzi Katayoun, Lecomte Philippe, Moulin Charles-Henri, Thévenon Sophie, Alary Véronique, Casabianca François, Lauvie Anne, Boushaba Nadjet, Saïdi-Mehtar Nadhira, Boujenane Ismail, Araba Abdelillah, Menni Dalal, Pineau Olivier, Ciampolini Roberta, Casu Sara, El Beltagy Ahmed, Osman Mona-Abdelzaher, Rodellar Clementina, Martinez Amparo, Delgado Juan-Vicente, Landi Vincenzo, Hadjipavlou Georgia, Ligda Christina, Gautier Mathieu, Laloë Denis. 2015. In : Building tomorrow’s research agenda and bridging the science-policy gap. CIRAD, INRA, IRD, Agropolis International, Wageningen UR, CGIAR, UCDAVIS, FAO, Agreenium, GFAR. Montpellier : CIRAD, Résumé, 84. Climate-Smart Agriculture 2015 : Global Science Conference. 3, Montpellier, France, 16 Mars 2015/18 Mars 2015.

Alfalfa leaf curl virus: an aphid-transmitted geminivirus. Roumagnac Philippe, Granier Martine, Bernardo Pauline, Deshoux Maëlle, Ferdinand Romain, Galzi Serge, Fernandez Emmanuel, Julian Charlotte, Abt Isabelle, Filloux Denis, Mesleard François, Varsani Arvind, Blanc Stéphane, Martin Darren Patrick, Peterschmitt Michel. 2015. Journal of Virology, 89 (18) : 9683-9688.

Identification of novel Bromus- and Trifolium-associated circular DNA viruses. Kraberger Simona, Farkas Kata, Bernardo Pauline, Booker Cameron, Argüello-Astorga Gerardo, Mesleard François, Martin Darren Patrick, Roumagnac Philippe, Varsani Arvind. 2015. Archives of Virology, 160 (5) : 1303-1311.

A first analysis of the GALIMED project: Genetic Adaptation of bovine Livestock and production systems in Mediterranean Region. Flori Laurence, Moazami-Goudarzi Katayoun, Lecomte Philippe, Moulin Charles-Henri, Thevenon Sophie, Alary Véronique, Casabianca François, Lauvie Anne, Boushaba Nadjet, Saïdi-Mehtar Nadhira, Boujenane Ismail, Araba Abdelillah, Menni Dalal, Pineau Olivier, Ciampolini Roberta, Cecchi F., Casu Sara, Carta A., Sechi Tiziana, ElBeltagy A., Osman Mona-Abdelzaher, Rodellar Clementina, Martinez A., Delgado Juan-Vicente, Landi Vincenzo, Hadjipavlou Georgia, Ligda Christina, Mastrangelo Salvatore, Portolano Baldassare, Gautier Mathieu, Laloë Denis. 2015. In : Livret du Workshop Recolad 2015. INRA. Paris : INRA, Résumé, 34. Workshop Recolad 2015, Paris, France, 11 Février 2015/12 Février 2015.

Applications of hidden hybrid Markov/semi-Markov models: from stopover duration to breeding success dynamics. Choquet Rémi, Béchet Arnaud, Guédon Yann. 2014. Ecology and Evolution, 4 (6) : 817-826.

Importance of wetlands management for West Nile virus circulation risk, Camargue, Southern France. Pradier Sophie, Sandoz Alain, Paul Mathilde, Lefebvre Gaëtan, Tran Annelise, Maingault Josiane, Lecollinet Sylvie, Leblond Agnès. 2014. International Journal of Environmental Research and Public Health, 11 (8) : 7740-7754.

Multi-scale integrated assessment of regional conversion to Organic Farming (OF). Lopez-Ridaura Santiago, Delmotte Sylvestre, Le Page Christophe, Le Quéré Laure, Goulevant Gaël, Chauvelon Philippe, Sandoz Alain, Mouret Jean Claude. 2014. In : Organic farming, prototype for sustainable agricultures. Stéphane Bellon, Servane Penvern (eds.). Dordrecht : Springer, 453-466. ISBN 978-94-007-7926-6

A novel itera-like densovirus isolated by viral metagenomics from the sea barley Hordeum marinum. François Sarah, Bernardo Pauline, Filloux Denis, Roumagnac Philippe, Yaverkovski Nicole, Froissart Rémi, Ogliastro Mylène. 2014. Genome Announcements, 2 (6):e01196, 2 p.

Characterization of novel, highly divergent geminiviruses and insights into the evolutionary history of geminiviruses. Bernardo Pauline, Ortet Philippe, Barakat Mohamed, Rebelo Anthony, Cousins Stephen, Fernandez Emmanuel, Mesleard François, Peterschmitt Michel, Filloux Denis, Varsani Arvind, Martin Darren Patrick, Roumagnac Philippe. 2013. In : 7th International Geminvirus Symposium and 5th International ssDNA Comparative Virology Workshop, Hangzhou, China, November 3-9, 2013. s.l. : s.n., Résumé, 1 p. International Geminvirus Symposium. 7, Hangzhou, Chine, 3 Novembre 2013/9 Novembre 2013.

Facteurs de risques environnmentaux pour la circulation du virus. Durand Benoit, Tran Annelise, Leblond Agnès, Sandoz Alain, Bicout Dominique. 2013. In : Le virus du Nil occidental. Versailles : Ed. Quae, 157-175. (Synthèses) ISBN 978-2-7592-1968-1

Geo-metagenomics: deciphering the spatial biodiversity of ssDNA viruses associated with Western Cape and Camargue agroecosystems. Bernardo Pauline, Ortet Philippe, Barakat Mohamed, Rebelo Anthony, Cousins Stephen, Fernandez Emmanuel, Mesleard François, Peterschmitt Michel, Filloux Denis, Varsani Arvind, Martin Darren Patrick, Roumagnac Philippe. 2013. In : 7th International Geminvirus Symposium and 5th International ssDNA Comparative Virology Workshop, Hangzhou, China, November 3-9, 2013. s.l. : s.n., Résumé, 1 p. International Geminvirus Symposium. 7, Hangzhou, Chine, 3 Novembre 2013/9 Novembre 2013.

Combining different modelling approaches for a participative assessment of alternative agricultural systems at different scales at different scales. Delmotte Sylvestre, Lopez-Ridaura Santiago, Goulevant Gaël, Mouret Jean Claude, Le Page Christophe, Chauvelon Philippe, Sandoz Alain, Barbier Jean-Marc, Wery Jacques. 2011. In : Resilient food systems for a changing world : Proceedings of the 5th World Congress on conservation agriculture, incorporating 3rd International farming systems design Conference, 26-29th September 2011, Brisbane, Australia. Canberra : ACIAR, 272-273. World Congress on Conservation Agriculture. 5, Brisbane, Australie, 26 Septembre 2011/29 Septembre 2011.

Influence of water on the circulation of the West Nile Virus in horses in Southern France. Pradier Sophie, Sandoz Alain, Lefebvre Gaëtan, Tran Annelise, Lecollinet Sylvie, Leblond Agnès. 2010. Retrovirology, 7 (1), suppl. : 186. International Symposium on HIV and Emerging Infectious Diseases. 16, Marseille, France, 24 Mars 2010/26 Mars 2010.

Prospective pour la recherche française en biodiversité : rédigée pour le Ministère de l'Enseignement supérieur et de la Recherche en complément de l'exercice de stratégie nationale recherche et innovation. Silvain Jean-François (ed.), Babin Didier, Barbault Robert, Bertin Philippe, Bodo Bernard, Boude Jean Pierre, Boudry Pierre, Bourgoin Thierry, Boyen Catherine, Cormier-Salem Marie-Christine, Courchamp Franck, Couvet Denis, David Bruno, Delay Bernard, Doussan Isabelle, Jaskulke Elisabeth, Lavorel Sandra, Leadley Paul, Lefèvre François, Le Roux Xavier, Leriche Hélène, Letourneux François, Los Wouter, Mesleard François, Morand Serge, Schmidt-Lainé Claudine, Siclet Françoise, Verrier Etienne. 2009. Paris : FRB, 96 p.

Des roselières et des hommes : ButorStar un jeu de rôles pour l'aide à la gestion collective. Mathevet Raphaël, Le Page Christophe, Etienne Michel, Poulin Brigitte, Lefebvre Gaëtan, Cazin Franck, Ruffray Xavier. 2008. Revue Internationale de Géomatique, 18 (3) : 375-395.

Ecosystem accounting for the cost of biodiversity losses: framework and case study for coastal mediterranean wetlands: version 1. Weber Jean-Louis, Uhel Ronan, Spyropoulou Rania, Breton Françoise, Arévalo Juan, Richard Dominique, Haines-Young Roy, Potschin Marion, Kumar Pushpam, Martin Berta, Lomas Pedro, Gomez Erik, Tomas Pere, Ezzine de Blas Driss, Nichersu Iulian, Marin Eugenia. 2008. Copenhague : EEA [European Environment Agency], 204 p.

BUTORSTAR: A role-playing game for collective awareness of wise reedbed use. Mathevet Raphaël, Le Page Christophe, Etienne Michel, Lefebvre Gaëtan, Poulin Brigitte, Gigot Guillaume, Proréol Sophie, Mauchamp André. 2007. Simulation and Gaming, 38 (2) : 233-262.

Le jeu de rôle butorstar comme outil de sensibilisation et d'aide à la gestion collective des roselières. Mathevet Raphaël, Le Page Christophe, Etienne Michel, Lefebvre Gaëtan, Poulin Brigitte, Mauchamp André. 2005. In : Colloque international Modélisations à l'interface entre natures et sociétés, 7-9décembre 2005, Montpellier, France. s.l. : s.n., 1 p. Journées de l'Association Nature Sciences Sociétés, Montpellier, France, 7 Décembre 2005/9 Décembre 2005.

Analyse d'une expérience interdisciplinarie d'appui au développement de la céréaliculture biologique en Camargue : le projet CEBIOCA. Barbier J.M., Desclaux Dominique, Dreyfus Fabrice, Marnotte Pascal, Mesleard François, Mouret Jean Claude. 2003. In : Séminaire sur les recherches en agriculture biologique, Draveil, France, 20 et 21 novembre 2003. s.l. : s.n., 13 p. Séminaire sur les recherches en agriculture biologique, Draveil, France, 20 Novembre 2003/21 Novembre 2003.

Our companion modelling approach. Barreteau Olivier, Antona Martine, D'Aquino Patrick, Aubert Sigrid, Boissau Stanislas, Bousquet François, Daré William's, Etienne Michel, Le Page Christophe, Mathevet Raphaël, Trébuil Guy, Weber Jacques. 2003. Journal of Artificial Societies and Social Simulation, 6 (2):1, n.p.