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Interpreting phylogenetic placements for taxonomic assignment of environmental DNA. Ewers Isabelle, Rajter Lubomir, Czech Lucas, Mahe Frédéric, Stamatakis Alexandros, Dunthorn Micah. 2023. Journal of Eukaryotic Microbiology, 70 (5):12990, 10 p.

Swarm v3: Towards tera-scale amplicon clustering. Mahe Frédéric, Czech Lucas, Stamatakis Alexandros, Quince Christopher, de Vargas Colomban, Dunthorn Micah, Rognes Torbjørn. 2022. Bioinformatics, 38 (1) : 267-269.

Morphological and molecular perspectives on the phylogeny, evolution, and classification of weevils (Coleoptera: Curculionoidea): Proceedings from the 2016 International Weevil Meeting. McKenna Duane D., Clarke Dave J., Anderson Robert, Astrin Jonas J., Brown Samuel, Chamorro Lourdes, Davis Steven R., de Medeiros Bruno, del Rio M. Guadalupe, Haran Julien, Kuschel Guillermo, Franz Nico, Jordal Bjarte, Lanteri Analia, Leschen Richard A.B., Letsch Harald, Lyal Chris, Marvaldi Adriana, Mermudes Jose Ricardo, Oberprieler Rolf G., Schütte André, Sequeira Andrea, Shin Seunggwan, Van Dam Matthew H., Zhang Guanyang. 2018. Diversity, 10 (3):64, 33 p.