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Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. Bernardo Pauline, Charles-Dominique Tristan, Barakat Mohamed, Ortet Philippe, Fernandez Emmanuel, Filloux Denis, Hartnady Penelope, Rebelo Tony A., Cousins Stephen, Mesleard François, Cohez Damien, Yaverkovski Nicole, Varsani Arvind, Harkins Gordon William, Peterschmitt Michel, Malmstrom Carolyn, Martin Darren Patrick, Roumagnac Philippe. 2018. ISME Journal, 12 : 174-184.

Prioritising surveillance for alien organisms transported as stowaways on ships travelling to South Africa. Faulkner Katelyn T., Robertson Mark P., Rouget Mathieu, Wilson John R. U.. 2017. PloS One, 12 (4):e0173340, 20 p.

Rapid prioritization of alien plants for eradication based on climatic suitability and eradication feasibility. Rentería Jorge L., Rouget Mathieu, Visser Vernon. 2017. Austral Ecology, 42 (8) : 995-1005.

Identification and characterisation of a highly divergent geminivirus: Evolutionary and taxonomic implications. Bernardo Pauline, Golden Michael, Akram Mohammad, Naimuddin, Nadarajan Nagaswamy, Fernandez Emmanuel, Granier Martine, Rebelo Anthony, Peterschmitt Michel, Martin Darren Patrick, Roumagnac Philippe. 2013. Virus Research, 177 (1) : 35-45.

Integrating conservation, restoration and land-use planning in islands: An illustrative case study in Réunion Island (Western Indian Ocean). Lagabrielle Erwann, Rouget Mathieu, Le Bourgeois Thomas, Payet Karine, Durieux Laurent, Baret Stéphane, Dupont Joël, Strasberg Dominique. 2011. Landscape and Urban Planning, 101 (2) : 120-130.

Risk assessment, eradication, and biological control: global efforts to limit Australian acacia invasions. Wilson John R. U., Gairifo Claire, Gibson Michelle R., Arianoutsou Margarita, Bakar Baki B., Baret Stéphane, Celesti-Grapow Laura, DiTomaso Joseph M., Dufour-Dror Jean-Marc, Kueffer Christophe, Kull Christian A., Hoffmann John H., Impson Fiona A. C., Loope Lloyd L., Marchante Elizabete, Marchante Hélia, Moore Joslin L., Murphy Daniel J., Tassin Jacques, Witt Arne, Zenni Raphael D., Richardson David M.. 2011. Diversity and Distributions, 17 (5) : 1030-1046.

Proceedings of a Workshop on Biodiversity Dynamics on la Réunion Island. Baret Stéphane (ed.), Rouget Mathieu (ed.), Nänni Ingrid (ed.), Le Bourgeois Thomas (ed.). 2004. Montpellier : CIRAD, 72 p. Atelier sur la dynamique de la biodiversité à la Réunion, Saint-Pierre, Réunion, 29 Novembre 2004/5 Décembre 2004.

Proceedings of a Workshop on biodiversity dynamics on la Réunion Island, Saint Pierre - Saint Denis, 29 November - 5 December 2004. Baret Stéphane (ed.), Rouget Mathieu (ed.), Nänni Ingrid (ed.), Le Bourgeois Thomas (ed.). 2004. Saint-Denis : Université de la Réunion, 1 Cd-Rom Atelier sur la dynamique de la biodiversité à la Réunion, Saint-Pierre, Réunion, 29 Novembre 2004/5 Décembre 2004.

Geo-metagenomics: deciphering the spatial biodiversity of plant viruses associated with the unique fynbos ecosystem of Southern Africa and its neighbouring agro-ecosystem. Bernardo Pauline, Ortet Philippe, Barakat Mohamed, Rebelo Anthony, Cousins Stephen, Fernandez Emmanuel, Peterschmitt Michel, Filloux Denis, Varsani Arvind, Martin Darren Patrick, Roumagnac Philippe. 2013. In : EMBO Workshop Green Viruses, from Gene to Landscape, 7-11 September 2013, Hyères-les-Palmiers, France : programme and abstracts book. CNRS, UMR BGPI. s.l. : s.n., Résumé, 43. EMBO Workshop Green Viruses, from Gene to Landscape, Hyères-les-Palmier, France, 7 Septembre 2013/11 Septembre 2013.

Spatial metagenomics illuminate the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. Roumagnac Philippe, Bernardo Pauline, Charles-Dominique Tristan, Fernandez Emmanuel, Filloux Denis, Ortet Philippe, Barakat Mohamed, Rebelo Tony A., Cousins Stephen, Mesleard François, Cohez Damien, Yaverkovski Nicole, Varsani Arvind, Harkins Gordon William, Peterschmitt Michel, Malmstrom Carolyn M., Martin Darren Patrick. 2017. . Paris : INRA, 93. International Conference on Holobionts, Paris, France, 19 Avril 2017/21 Avril 2017.

Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. O13. Bernardo Pauline, Charles-Dominique Tristan, Barakat Mohamed, Ortet Philippe, Fernandez Emmanuel, Filloux Denis, Hartnady Penelope, Rebelo Tony A., Cousins Stephen, Mesleard François, Cohez Damien, Yaverkovski Nicole, Varsani Arvind, Harkins Gordon William, Peterschmitt Michel, Malmstrom Carolyn, Martin Darren Patrick, Roumagnac Philippe. 2018. In : Book of abstract Pathobiome 2018. INRA. Ajaccio : INRA, Résumé, 25-26. Pathobiome, Ajaccio, France, 18 Mars 2018/20 Mars 2018.

Deciphering plant-associated viruses at the agroecosystem scale using geometagenomics. Charles-Dominique Tristan, Fernandez Emmanuel, Filloux Denis, Ortet Philippe, Barakat Mohamed, Rebelo Tony A., Varsani Arvind, Malmstrom Carolyn M., Martin Darren Patrick, Roumagnac Philippe. 2016. . University of Helsinki. Helsinki : University of Helsinki, Résumé, 1 p. International Meeting on Wild Plant Pathosystems. 2, Helsinki, Finlande, 29 Août 2016/31 Août 2016.

Characterization of novel, highly divergent geminiviruses and insights into the evolutionary history of geminiviruses. Bernardo Pauline, Ortet Philippe, Barakat Mohamed, Rebelo Anthony, Cousins Stephen, Fernandez Emmanuel, Mesleard François, Peterschmitt Michel, Filloux Denis, Varsani Arvind, Martin Darren Patrick, Roumagnac Philippe. 2013. In : 7th International Geminvirus Symposium and 5th International ssDNA Comparative Virology Workshop, Hangzhou, China, November 3-9, 2013. s.l. : s.n., Résumé, 1 p. International Geminvirus Symposium. 7, Hangzhou, Chine, 3 Novembre 2013/9 Novembre 2013.

Geo-metagenomics: deciphering the spatial biodiversity of ssDNA viruses associated with Western Cape and Camargue agroecosystems. Bernardo Pauline, Ortet Philippe, Barakat Mohamed, Rebelo Anthony, Cousins Stephen, Fernandez Emmanuel, Mesleard François, Peterschmitt Michel, Filloux Denis, Varsani Arvind, Martin Darren Patrick, Roumagnac Philippe. 2013. In : 7th International Geminvirus Symposium and 5th International ssDNA Comparative Virology Workshop, Hangzhou, China, November 3-9, 2013. s.l. : s.n., Résumé, 1 p. International Geminvirus Symposium. 7, Hangzhou, Chine, 3 Novembre 2013/9 Novembre 2013.

Molecular characterization of Euphorbia caput-medusae stunt virus: Evidence for the existence of a new genus within the family Geminiviridae. Bernardo Pauline, Fernandez Emmanuel, Granier Martine, Golden Michael, Rebelo Tony A., Peterschmitt Michel, Martin Darren Patrick, Roumagnac Philippe. 2013. In : 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Marais Armelle (ed.), Revers Frédéric (ed.). SFP, INRA. Paris : SFP, Résumé, 9. Rencontres de Virologie Végétale. 14, Aussois, France, 13 Janvier 2013/17 Janvier 2013.

Spatial analysis of the main invasive plant invasions on La Réunion Island. Baret Stéphane, Rouget Mathieu, Richardson David M., Strasberg Dominique. 2004. In : Proceedings of a Workshop on biodiversity dynamics on la Réunion Island, Saint Pierre - Saint Denis, 29 November - 5 December 2004 = Atelier sur la dynamique de la biodiversité à la Réunion. Saint Pierre - Saint Denis, 29 novembre- 5 décembre 2004. Baret Stéphane (ed.), Rouget Mathieu (ed.), Nänni Ingrid (ed.), Le Bourgeois Thomas (ed.). Université de la Réunion, CIRAD. Saint-Denis : Université de la Réunion, 29-30. Atelier sur la dynamique de la biodiversité à la Réunion, Saint-Pierre, Réunion, 29 Novembre 2004/5 Décembre 2004.