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Geographic patterns of tree dispersal modes in Amazonia and their ecological correlates. Correa Diego F., Stevenson Pablo R., Umaña Maria Natalia, de Souza Coelho Luiz, de Andrade Lima Filho Diogenes, Salomão Rafael P., do Amaral Iêda Leão, Wittmann Florian, de Almeida Matos Francisca Dionízia, Castilho Carolina V., Phillips Oliver L., Guevara Juan Ernesto, de Jesus Veiga Carim Marcelo, Magnusson William E, Sabatier Daniel, Molino Jean-François, Irume Mariana Victória, Pires Martins Maria, da Silva Guimarães José Renan, Banki Olaf, Fernandez Piedade Maria Teresa, Pitman Nigel C. A., Monteagudo Mendoza Abel L., Ferreira Ramos José, Garcia Luize Bruno, Moraes de Leão Novo Evlyn Márcia, Nuñez Vargas Percy, Freire Silva Thiago Sanna, Venticinque Eduardo Martins, Manzatto Angelo Gilberto, Costa Reis Neidiane Farias, Terborgh John, Casula Katia Regina, Honorio Coronado Eurídice N., Montero Juan Carlos, Schöngart Jochen, Cárdenas López Dairon, Costa Flávia R.C, Costa Quaresma Adriano, Zartman Charles Eugene, Killeen Timothy J., Marimon Beatriz Schwantes, Marimon Junior Ben Hur, Vasquez Rodolfo, Mostacedo Bonifacio, Demarchi Layon O., Feldpausch Ted R., Assis Rafael L., Baraloto Christopher, Engel Julien, Petronelli Pascal, et al.. 2023. Global Ecology and Biogeography, 32 (1) : 49-69.

Global maps of soil temperature. Lembrechts Jonas J., van den Hoogen Johan, Aalto Juha, Ashcroft Michael B., De Frenne Pieter, Kemppinen Julia, Kopecký Martin, Luoto Miska, Maclean Ilya M. D., Crowther Thomas W., Bailey Joseph J., Haesen Stef, Klinges David H., Niittynen Pekka, Scheffers Brett R., Van Meerbeek Koenraad, Aartsma Peter, Abdalaze Otar, Abedi Mehdi, Aerts Rien, Ahmadian Negar, Ahrends Antje, Alatalo Juha M., Alexander Jake M., Allonsius Camille Nina, Altman Jan, Ammann Christof, Andres Christian, Andrews Christopher, Ardö Jonas, Arriga Nicola, Arzac Alberto, Aschero Valeria, Assis Rafael L., Assmann Jakob Johann, Bader Maaike Y., Bahalkeh Khadijeh, Barančok Peter, Barrio Isabel C., Barros Agustina, Barthel Matti, Basham Edmund W., Bauters Marijn, Bazzichetto Manuele, Belelli Marchesini Luca, Bell Michael C., Benavides Juan C., Benito Alonso José Luis, Berauer Bernd J., Bjerke Jarle W., Björk Robert G., Björkman Mats P., Björnsdóttir Katrin, Blonder Benjamin, Boeckx Pascal, Boike Julia, Bokhorst Stef, Brum Bárbara N. S., Brůna Josef, Buchmann Nina, Buysse Pauline, Camargo Jose Luis C., Campoe Otavio, Candan Onur, Canessa Rafaella, Cannone Nicoletta, Carbognani Michele, Carnicer Jofre, Casanova-Katny Angélica, Cesarz Simone, Chojnicki Bogdan, Choler Philippe, Chown Steven L., Cifuentes Edgar F., Čiliak Marek, Contador Tamara, Convey Peter, Cooper Elisabeth J., Cremonese Eodardo, Curasi Salvatore R., Curtis Robin, Cutini Maurizio, Dahlberg C. Johan, Daskalova Gergana N., de Pablo Miguel Angel, Della Chiesa Stefano, Dengler Jürgen, Deronde Bart, Di Cecco Valter, Di Musciano Michele, Dick Jan, Dimarco Romina D., Dolezal Jiri, Dorrepaal Ellen, Dusek Jiri, Eisenhauer Nico, Eklundh Lars, Erickson Todd E., Erschbamer Brigitta, Eugster Werner, Ewers Robert M., Exton Dan A., Fanin Nicolas, Fazlioglu Fatih, Feigenwinter Iris, Fenu Giuseppe, Ferlian Olga, Fernández Calzado M. Rosa, Fernández-Pascual Eduardo, Finckh Manfred, Finger Higgens Rebecca, Forte T'ai G. W., Freeman Erika C., Frei Esther R., Fuentes-Lillo Eduardo, García Rafael A., García María B., Géron Charly, Gharun Mana, Ghosn Dany, Gigauri Khatuna, Gobin Anne, Goded Ignacio, Goeckede Mathias, Gottschall Felix, Goulding Keith, Govaert Sanne, Jessen Graae Bente, Greenwood Sarah, Greiser Caroline, Grelle Achim, Guénard Benoït, Guglielmin Mauro, Guillemot Joannès, Haase Peter, Haider Sylvia, Halbritter Aud H., Hamid Maroof, Hammerle Albin, Hampe Arndt, Haugum Siri V., Hederová Lucia, Heinesch Bernard, Helfters Carole, Hepenstrick Daniel, Herberich Maximiliane, Herbst Mathias, Hermanutz Luise, Hik David S., Hoffrén Raúl, Homeier Jürgen, Hörtnagl Lukas, Hoye Toke T., Hrbacek Filip, Hylander Kristoffer, Iwata Hiroki, Jackowicz-Korczynski Marcin, Jactel Hervé, Järveoja Järvi, Jastrzębowski Szymon, Jentsch Anke, Jiménez Juan J., Jónsdóttir Ingibjörg S., Jucker Tommaso, Jump Alistair S., Juszczak Radoslaw, Kanka Robert, Kašpar Vít, Kazakis George, Kelly Julia, Khuroo Anzar A., Klemedtsson Leif, Klisz Marcin, Kljun Natascha, Knohl Alexander, Kobler Johannes, Kollár Jozef, Kotowska Martyna M., Kovács Bence, Kreyling Juergen, Lamprecht Andrea, Lang Simone I., Larson Christian, Larson Keith, Laska Kamil, Le Maire Guerric, Leihy Rachel I., Lens Luc, Liljebladh Bengt, Lohila Annalea, Lorite Juan, Loubet Benjamin, Lynn Joshua, Macek Martin, Mackenzie Roy, Magliulo Enzo, Maier Regine, Malfasi Francesco, Malis František, Man Matěj, Manca Giovanni, Manco Antonio, Manise Tanguy, Manolaki Paraskevi, Marciniak Felipe, Matula Radim, Mazzolari Ana Clara, Medinets Volodymyr, Meeussen Camille, Merinero Sonia, de Cássia Guimarães Mesquita Rita, Meusburger Katrin, Meysman Filip J.R., Michaletz Sean T., Milbau Ann, Moiseev Dmitry, Moiseev Pavel, Mondoni Andrea, Monfries Ruth, Montagnani Leonardo, Moriana-Armendariz Mikel, Morra di Cella Umberto, Mörsdorf Martin, Mosedale Jonnathan R., Muffler Lena, Muñoz-Rojas Miriam, Myers Jonnathan A., Myers-Smith Isla H., Nagy Laszlo, Nardino Marianna, Naujokaitis-Lewis Ilona, Newling Emily, Nicklas Lena, Niedrist Georg, Niessner Armin, Nilsson Mats B., Normand Signe, Nosetto Marcelo, Nouvellon Yann, Nunez Martin, Ogaya Romà, Ogée Jérôme, Okello Joseph, Olejnik Janusz, Olesen Jørgen Eivind, Opedal Oystein H., Orsenigo Simone, Palaj Andrej, Pampuch Timo, Panov Alexey V., Pärtel Meelis, Pastor Ada, Pauchard Anibal, Pauli Harald, Pavelka Marian, Pearse William D., Peichl Matthias, Pellissier Loïc, Penczykowski Rachel M., Peñuelas Josep, Petit Bon Matteo, Petraglia Alessandro, Phartyal Shyam S., Phoenix Gareth K., Pio Casimiro, Pitacco Andrea, Pitteloud Camille, Plichta Roman, Porro Francesco, Portillo-Estrada Miguel, Poulenard Jérôme, Poyatos Rafael, Prokushkin Anatoly S., Puchalka Radoslaw, Puscas Mihai, Radujković Dajana, Randall Krystal, Ratier Backes Amanda, Remmele Sabine, Remmers Wolfram, Renault David, Risch Anita C., Rixen Christian, Robinson Sharon A., Robroek Bjorn J.M., Rocha Adrian V., Rossi Christian, Rossi Graziano, Roupsard Olivier, et al.. 2022. Global Change Biology, 28 (9) : 3110-3144.

Swarm v3: Towards tera-scale amplicon clustering. Mahe Frédéric, Czech Lucas, Stamatakis Alexandros, Quince Christopher, de Vargas Colomban, Dunthorn Micah, Rognes Torbjørn. 2022. Bioinformatics, 38 (1) : 267-269.

Rarity of monodominance in hyperdiverse Amazonian forests. Ter Steege Hans, Henkel Terry W., Helal Nora, Marimon Beatriz Schwantes, Marimon-Junior Ben Hur, Huth Andreas, Groeneveld Jürgen, Sabatier Daniel, de Souza Coelho Luiz, de Andrade Lima Filho Diogenes, Salomão Rafael P., Amaral Iêda Leão, de Almeida Matos Francisca Dionízia, Castilho Carolina V., Phillips Oliver L., Guevara Juan Ernesto, de Jesus Veiga Carim Marcelo, Cárdenas López Dairon, Magnusson William E, Wittmann Florian, Irume Victória Irume, Pires Martins Maria, da Silva Guimarães José Renan, Molino Jean-François, Banki Olaf, Fernandez Piedade Maria Teresa, Pitman Nigel C. A., Mendoza Abel Monteagudo, Ferreira Ramos José, Garcia Luize Bruno, Moraes de Leão Novo Evlyn Márcia, Nuñez Vargas Percy, Freire Silva Thiago Sanna, Venticinque Eduardo Martins, Manzatto Angelo Gilberto, Costa Reis Neidiane Farias, Terborgh John, Casula Katia Regina, Honorio Coronado Eurídice N., Montero Juan Carlos, Feldpausch Ted R., Duque Alvaro, Costa Flávia R.C, Castaño Arboleda Nicolás, Schöngart Jochen, Killeen Timothy J., Vasquez Rodolfo, Mostacedo Bonifacio, Demarchi Layon O., Assis Rafael L., Baraloto Christopher, Engel Julien, Petronelli Pascal, et al.. 2019. Scientific Reports, 9 (1):13822, 15 p.

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests. Mahé Frédéric, de Vargas Colomban, Bass David, Czech Lucas, Stamatakis Alexandros, Lara Enrique, Singer David, Mayor Jordan, Bunge John, Sernaker Sarah, Siemensmeyer Tobias, Trautmann Isabelle, Romac Sarah, Berney Cédric, Kozlov Alexey, Mitchell Edward A. D., Seppey Christophe V. W., Egge Elianne, Lentendu Guillaume, Wirth Rainer, Trueba Gabriel, Dunthorn Micah. 2017. Nature Ecology and Evolution, 1 (4):0091, 8 p.

Yeasts dominate soil fungal communities in three lowland Neotropical rainforests. Dunthorn Micah, Kauserud Håvard, Bass David, Mayor Jordan, Mahé Frédéric. 2017. Environmental Microbiology Reports, 9 (5) : 668-675.

VSEARCH: a versatile open source tool for metagenomics. Rognes Torbjørn, Flouri Tomás, Nichols Ben, Quince Christopher, Mahe Frédéric. 2016. PeerJ, 4 (e2584), 22 p.

An estimate of the number of tropical tree species. Ferry Slik J.W., Arroyo-Rodriguez Victor, Aiba Shin-Ichiro, Alvarez-Loayza Patricia, Alves Luciana F., Ashton Peter, Balvanera Patricia, Bastian Meredith, Bellingham Peter J., Van den Berg Eduardo, Bernacci Luis, de Conceicao Bispo Polyanna, Blanc Lilian, Böhning-Gaese Katrin, Boeckx Pascal, Bongers Frans, Boyle Brad, Bradford Matt, Brearley Francis Q., Breuer-Ndoundou Hockemba Mireille, Bunyavejchewin Sarayudh, Calderado Leal Matos Darley, Castillo-Santiago Miguel Angel, Catharino Eduardo L.M., Chai Shauna-Lee, Chen Yukai, Colwell Robert K., Robin Chazdon L., Clark Connie J., Clark David B., Clark Deborah A., Culmsee Heike, Damas Kipiro, Dattaraja Handanakere Shivaramai, Dauby Gilles, Davidar Priya, DeWalt Saara J., Doucet Jean-Louis, Duque Alvaro, Durigan Giselda, Eichhorn Karl A.O., Eisenlohr Pedro V., Eler Eduardo, Ewango Corneille, Farwig Nina, Feeley Kenneth J., Ferreira Leandro V., Field Richard, de Oliveira Filho Ary T., Fletcher Christine D., Forshed Olle, Franco Geraldo, Fredriksson Gabriella, Gillespie Thomas, Gillet Jean-François, Amarnath Giriraj, Griffith Daniel M., Grogan James, Gunatilleke I.A.U.N., Harris David, Harrison Rhett, Hector Andy, Homeier Jürgen, Imai Nobuo, Itoh Akira, Jansen Patrick A., Joly Carlos Alfredo, de Jong Bernardus H.J., Kartawinata Kuswata, Kearsley Elizabeth, Kelly Daniel L., Kenfack David, Kessler Michael, Kitayama Kanehiro, Kooyman Robert, Larney Eileen, Laumonier Yves, Laurance Susan G.W., Laurance William F., Lawes Michael J., Amaral Iêda Leão, Letcher Susan G., Lindsell Jeremy, Lu Xinghui, Mansor Asyraf, Marjokorpi Antti, Martin Emanuel, Meilby Henrik, Melo Felipe P.L., Metcalfe Daniel J., Medjibé Vincent, Metzger Jean Paul, Millet Jerome, Mohandass D., Montero Juan C., de Morisson Valeriano Marcio, Mugerwa Badru, Nagamasu Hidetoshi, Nilus Reuben, Ochoa-Gaona Susana, Onrizal Onrizal, Page Navendu, Parolin Pia, Parren Marc, Parthasarathy Narayanaswamy, Paudel Ekananda, Permana Andrea, Piedade Maria Teresa F., Pitman Nigel C. A., Poorter Lourens, Poulsen Axel Dalberg, Poulsen John R., Powers Jennifer S., Prasad Rama Chandra, Puyravaud Jean-Philippe, Razafimahaimodison Jean-Claude, Reitsma Jan, Dos Santos João Roberto, Roberto Spironello Wilson, Romero-Saltos Hugo, Rovero Francesco, Rozak Andes Hamuraby, Ruokolainen Kalle, Rutishauser Ervan, Saiter Felipe, Saner Philippe, Santos Braulio A., Santos Fernanda, Sarker Swapan Kumar, Satdichanh Manichanh, Schmitt Christine B., Schöngart Jochen, Schulze Mark, Suganuma Marcio S., Sheil Douglas, da Silva Pinheiro Eduardo, Sist Plinio, et al.. 2015. Proceedings of the National Academy of Sciences of the United States of America, 112 (24) : 7472-7477.

Publishing scientific software matters [Preface]. Pradal Christophe, Varoquaux Gaël, Langtangen Hans Peter. 2013. Journal of Computational Science, 4 (5) : 311-312.

Rift Valley Fever: One health at play? Lancelot Renaud, Cetre-Sossah Catherine, Hassan Osama Ahmed, Yahya Barry, Ould Elmamy Bezeid, Fall Assane Gueye, Lo Modou Moustapha, Apolloni Andrea, Arsevska Elena, Chevalier Véronique. 2019. In : Transboundary animal diseases in Sahelian Africa and connected regions. Kardjadj Moustafa (ed.), Diallo Adama (ed.), Lancelot Renaud (ed.). Cham : Springer, 121-148. ISBN 978-3-030-25385-1