Parcourir par Mots clés libres

Exploring the Vanilla planifolia genome using bioinformatics tools such as the Vanilla Genome Hub. Droc Gaëtan, Piet Quentin, Sarah Gautier, Bocs Stéphanie. 2024. In : Book of abstracts, 5th International Vanilla Congress, 4-7 June 2024, Reunion Island, France. CIRAD, Université de la Réunion. Saint-Pierre : CIRAD-Université de la Réunion, Résumé, p. 27. International Vanilla Congress (IVC 2024). 5, Saint-Pierre, Réunion, 4 Juin 2024/7 Juin 2024.

Novel pipelines for assembling and annotation of genomes for plant pathogenic fungi. Application on two major banana pathogens [P4.3-024]. Ravel Sébastien, Bache Simon, Durand Théo, Mostert Diane, Viljoen Altus, Carlier Jean, Wicker Emmanuel. 2023. In : 12th International Congress of Plant Pathology (ICPP 2023): One health for all plants, crops and trees. Book of abstracts. ISPP, SFP. Lyon : ISP, Résumé, p. 334. International Conference on Plant Pathology (ICPP 2023). 12, Lyon, France, 20 Août 2023/25 Août 2023.

Visualizing and inferring chromosome segregation in the pedigree of an improved banana cultivar (gold finger) with genome ancestry mosaic painting. Cenci Alberto, Martin Guillaume, Breton Catherine, D'Hont Angélique, Yahiaoui Nabila, Sardos Julie, Rouard Mathieu. 2023. Horticulturae, 9 (12), n.spéc. Developments in the Genetics and Breeding of Banana Species:1330, 11 p.

CAULIFINDER: A pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomes. Vassilieff Héléna, Haddad Sana, Jamilloux Véronique, Choisne Nathalie, Sharma Vikas, Giraud Delphine, Wan Mariène, Serfraz Saad, Geering Andrew D., Teycheney Pierre-Yves, Maumus Florian. 2022. Mobile DNA, 13:31, 12 p.

GeMo: A web-based platform for the visualization and curation of genome ancestry mosaics. Summo Marilyne, Comte Aurore, Martin Guillaume, Perelle Pierrick, Weitz Eric M., Droc Gaëtan, Rouard Mathieu. 2022. Database, 2022:baac057 : 1-5.

Neurospora from natural populations: Population genomics insights into the Life history of a model microbial Eukaryote. Gladieux Pierre, De Bellis Fabien, Hann-Soden Christopher, Svedberg Jesper, Johannesson Hanna, Taylor John W.. 2020. In : Statistical population genomics. Dutheil Julien Y. (ed.). Cham : Springer, 313-336. (Method in Molecular Biology, 2090) ISBN 978-1-07-160199-0

RRGPredictor, a set-theory-based tool for predicting pathogen-associated molecular pattern receptors (PRRs) and resistance (R) proteins from plants. Santana Silva Raner José, Micheli Fabienne. 2020. Genomics, 112 (3) : 2666-2676.

A whole-genome worldwide molecular epidemiology approach for contagious caprine pleuropneumonia. Loire Etienne, Issa Ibrahim Abdoulkarim, Manso-Silvan Lucia, Lignereux Louis, Thiaucourt François. 2020. Heliyon, 6:e05146, 7 p.

A highly specific tool for identification of Xanthomonas vasicola pv. musacearum based on five Xvm-specific coding sequences. Nakato Gloria Valentine, Wicker Emmanuel, Coutinho Teresa A., Mahuku George, Studholme David J.. 2018. Heliyon, 4 (12):e01080, 11 p.

SSDM : An R package to predict distribution of species richness and composition based on stacked species distribution models. Schmitt Sylvain, Pouteau Robin, Justeau-Allaire Dimitri, De Boissieu Florian, Birnbaum Philippe. 2017. Methods in Ecology and Evolution, 8 (12) : 1795-1803.

Genfam: integrative system for gene family analysis, including a method of evolutionary event identification and evidences for an involvement in environmental stress response. Larivière Delphine, Lorenzo Jonathan, Sidibé-Bocs Stéphanie, Dufayard Jean François, This Dominique. 2015. In : Recent progress in drought tolerance: from genetics to modelling conference handbook. Tardieu F. (ed.), Draye X. (ed.), Charcosset A. (ed.), Hammer G. (ed.), Usadel B. (ed.), Tuberosa R. (ed.), Welker C. (ed.), Boerner A. (ed.), Simic D.(ed.), Boller B. (ed.). Eucarpia, INRA. Montpellier : INRA-Transfert, 146. EUCARPIA Conference "Recent progress in drought tolerance: from genetics to modelling", Montpellier, France, 8 Juin 2015/9 Juin 2015.

RNA-SequenLens for visualizing RNA secondary structures. Ying Wang Florence, Sallaberry Arnaud, Roche Mathieu. 2015. In : BioVis 2015: 5th Symposium on Biological Data Visualization. s.l. : Biovis, 2 p. Symposium on Biological Data Visualization (BioVis'2015). 5, Dublin, Irlande, 10 Juillet 2015/11 Juillet 2015.