Résultats pour : "transcriptome"

Transcriptional changes during crown-root development and emergence in barley (Hordeum vulgare L.). Nguyen Dieu Thu, Zavadil Kokáš Filip, Gonin Mathieu, Lavarenne Jeremy, Colin Myriam, Gantet Pascal, Bergougnoux Véronique. 2024. BMC Plant Biology, 24:438, 14 p.

Global transcriptome profiling reveals differential regulatory, metabolic and hormonal networks during somatic embryogenesis in Coffea arabica. Awada Rayan, Lepelley Maud, Breton David, Charpagne Aline, Campa Claudine, Berry Victoria, Georget Frederic, Breitler Jean-Christophe, Leran Sophie, Djerrab Doaa, Martinez-Seidel Federico, Descombes Patrick, Crouzillat Dominique, Bertrand Benoît, Etienne Hervé. 2023. BMC Genomics, 24:41, 19 p.

Different transcriptomic architecture of the gill epithelia in Nile and Mozambique tilapia after salinity challenge. Campo Aurora, Nitzan Tali, Slosman Tatiana, Doron-Faigenboim Adi, D'Cotta Helena, Baroiller Jean-François, Cnaani Avner. 2022. Comparative Biochemistry and Physiology. Part D, Genomics and Proteomics, 41:100927, 14 p.

Gene copy number variations at the within-host population level modulate gene expression in a multipartite virus. Gallet Romain, Di Mattia Jeremy, Ravel Sébastien, Zeddam Jean-Louis, Vitalis Renaud, Michalakis Yannis, Blanc Stéphane. 2022. Virus Evolution, 8 (2):veac058 : 1-11.

Integrative approach for precise genotyping and transcriptomics of salt tolerant introgression rice lines. Bundó Mireia, Martín-Cardoso Héctor, Pesenti Michele, Gomez-Ariza Jorge, Castillo Laia, Frouin Julien, Serrat Xavier, Nogués Salvador, Courtois Brigitte, Grenier Cécile, Sacchi Gian Attilio, San Segundo Blanca. 2022. Frontiers in Plant Science, 12:797141, 20 p.

Multi-scale comparative transcriptome analysis reveals key genes and metabolic reprogramming processes associated with oil palm fruit abscission. Fooyontphanich Kim, Morcillo Fabienne, Joët Thierry, Dussert Stéphane, Serret Julien, Collin Myriam, Amblard Philippe, Tangphatsornruang Sithichoke, Roongsattham Peerapat, Jantasuriyarat Chatchawan, Verdeil Jean-Luc, Tranbarger Timothy John. 2021. BMC Plant Biology, 21:92, 18 p.

Photoperiod-dependent transcriptional modifications in key metabolic pathways in Coffea arabica. Djerrab Doaa, Bertrand Benoît, Breitler Jean-Christophe, Leran Sophie, Dechamp Eveline, Campa Claudine, Barrachina Célia, Conejero Geneviève, Etienne Hervé, Sulpice Ronan. 2021. Tree Physiology, 41 (2) : 302-316.

Transcriptomes of the interaction between Fusarium verticillioides and a Streptomyces strain reveal the fungal defense strategy under the pressure of a potential biocontrol agent. Strub Caroline, Dieye Cheikh Ahmeth Tidiane, Nguyen Phuong-Anh, Constancias Florentin, Durand Noël, Guendouz Samia, Pratlong Marine, Fontana Angélique, Schorr-Galindo Sabine. 2021. Fungal Biology, 125 (2) : 78-88.

A non-shedding fruit Elaeis oleifera palm reveals perturbations to hormone signaling, ROS homeostasis, and hemicellulose metabolism. Morcillo Fabienne, Serret Julien, Beckers Antoine, Collin Myriam, Tisne Sébastien, George Simon, Poveda Roberto, Louise Claude, Tranbarger Timothy John. 2021. Genes, 12 (11), n.spéc. Genetic Basis and Physiology of Fruit Ripening and Abscission:1724, 18 p.

The road to sorghum domestication: Evidence from nucleotide diversity and gene expression patterns. Burgarella Concetta, Berger Angélique, Glemin Sylvain, David Jacques, Terrier Nancy, Deu Monique, Pot David. 2021. Frontiers in Plant Science, 12:666075, 15 p.

Homeobox transcription factor OsZHD2 promotes root meristem activity in rice by inducing ethylene biosynthesis. Yoon Jinmi, Cho Lae-Hyeon, Yang Wenzhu, Pasriga Richa, Wu Yunfei, Hong Woo-Jong, Bureau Charlotte, Wi Soo Jin, Zhang Tao, Wang Rongchen, Zhang Dabing, Jung Ki-Hong, Park Ky Young, Perin Christophe, Zhao Yunde, An Gynheung. 2020. Journal of Experimental Botany, 71 (18) : 5348-5364.

In vitro shared transcriptomic responses of Aedes aegypti to arboviral infections: Example of dengue and Rift Valley fever viruses. Licciardi Séverine, Loire Etienne, Cardinale Eric, Gislard Marie, Dubois Emeric, Cetre-Sossah Catherine. 2020. Parasites and Vectors, 13 (1):395, 10 p.

Large-scale survey reveals pervasiveness and potential function of endogenous geminiviral sequences in plants. Sharma Vikas, Lefeuvre Pierre, Roumagnac Philippe, Filloux Denis, Teycheney Pierre-Yves, Martin Darren Patrick, Maumus Florian. 2020. Virus Evolution, 6 (2):veaa071, 13 p.

Transcriptome profiling of laser-captured crown root primordia reveals new pathways activated during early stages of crown root formation in rice. Lavarenne Jeremy, Gonin Mathieu, Champion Anthony, Javelle Marie, Adam Hélène, Rouster Jacques, Conejero Geneviève, Lartaud Marc, Verdeil Jean-Luc, Laplaze Laurent, Sallaud Christophe, Lucas Mikaël, Gantet Pascal. 2020. PloS One, 15 (11):e0238736, 15 p.

Transcriptome data from three endemic Myrtaceae species from New Caledonia displaying contrasting responses to myrtle rust (Austropuccinia psidii). Soewarto Julia, Hamelin Chantal, Bocs Stéphanie, Mournet Pierre, Vignes Hélène, Berger Angélique, Armero Villanueva Alix Augusto, Martin Guillaume, Dereeper Alexis, Sarah Gautier, Carriconde Fabian, Maggia Laurent. 2019. Data in Brief, 22 : 794-811.