Parcourir par Auteur Cirad

Multi-locus sequence analysis reveals great genetic diversity among Mycoplasma capricolum subsp. capripneumoniae strains in Asia. Akhtar Arooba, Boissiere Anne, Hao Huafang, Saeed Muhammad, Dupuy Virginie, Exbrayat Antoni, Khan Farhan Anwar, Chu Yuefeng, Manso-Silvan Lucia. 2022. Veterinary Research, 53:92, 9 p.

A library preparation optimized for metagenomics of RNA viruses. Gil Patricia, Dupuy Virginie, Koual Rachid, Exbrayat Antoni, Loire Etienne, Fall Assane Gueye, Gimonneau Geoffrey, Biteye Biram, Talla Seck Monar, Rakotoarivony Ignace, Marie Albane, Francés Benoit, Lambert Grégory, Reveillaud Julie, Balenghien Thomas, Garros Claire, Albina Emmanuel, Eloit Marc, Gutierrez Serafin. 2021. Molecular Ecology Resources, 21 (6) : 1788-1807.

A library preparation optimized for metagenomics of RNA viruses. Gil Patricia, Dupuy Virginie, Koual Rachid, Loire Etienne, Exbrayat Antoni, Rakotoarivony Ignace, Fall Assane Gueye, Gimonneau Geoffrey, Marie Albane, Francés Benoit, Lambert Grégory, Reveillaud Julie, Gardes Laëtitia, Balenghien Thomas, Garros Claire, Albina Emmanuel, Gutierrez Serafin. 2019. In : 13th EPIZONE Annual Meeting "Breaking Walls" - Abstract Book. Mettenleiter Thomas C. (ed.), Beer Martin (ed.), Conraths Franz J. (ed.), Blome Sandra (ed.), Bussmann Bianca M. (ed.). FLI, German Federal Research Institute for Animal Health. Berlin : Friedrich-Loeffler-Institut, Résumé, p. 154. EPIZONE Annual Meeting. 13, Berlin, Allemagne, 26 Août 2019/28 Août 2019.

A library preparation optimized for RNA virus metagenomics allows sensitive detection of an arbovirus in wild-caught vectors. P14. Gil Patricia, Dupuy Virginie, Koual Rachid, Gueye Fall Assane, Biteye Biram, Gimonneau Geoffrey, Marie Albane, Francés Benoit, Lambert Grégory, Rakotoarivony Ignace, Gardes Laëtitia, Balenghien Thomas, Garros Claire, Gutierrez Serafin. 2018. In : Book of abstract Pathobiome 2018. INRA. Ajaccio : INRA, Résumé, 40-41. Pathobiome, Ajaccio, France, 18 Mars 2018/20 Mars 2018.

SNaPshot and CE-SSCP: two simple and cost-effective methods to reveal genetic variability within a virus species. Delaunay Agnès, Dallot Sylvie, Filloux Denis, Dupuy Virginie, Roumagnac Philippe, Jacquot Emmanuel. 2015. In : Plant pathology: techniques and protocols. Lacomme Christophe (ed.). New York : Springer [Etats-Unis], 187-206. (Methods in Molecular Biology, 1302) ISBN 978-1-4939-2619-0

A large-scale genomic approach affords unprecedented resolution for the molecular epidemiology and evolutionary history of contagious caprine pleuropneumonia. Dupuy Virginie, Thiaucourt François, Manso-Silvan Lucia. 2015. In : Progress in Human and Animal Mycoplasmology. Book of abstracts. Pendik Veterinary Control Institute. Istanbul : Pendik Veterinary Control Institute, Résumé, 1 p. Progress in Human and Animal Mycoplasmology, Istanbul, Turquie, 3 Juin 2015/5 Juin 2015.

A large-scale genomic approach affords unprecedented resolution for the molecular epidemiology and evolutionary history of contagious caprine pleuropneumonia. Dupuy Virginie, Verdier Axel, Thiaucourt François, Manso-Silvan Lucia. 2015. Veterinary Research, 46 (74), 11 p.

Complete genome sequence of Mycoplasma capricolum subsp. capripneumoniae strain 9231-Abomsa. Dupuy Virginie, Thiaucourt François. 2014. Genome Announcements, 2 (5):e01067, 1 p.

Fatal transmission of contagious caprine pleuropneumonia to an Arabian oryx (Oryx leucoryx). Chaber Anne-Lise, Lignereux Yves, Al Qassimi M., Saegerman Claude, Manso-Silvan Lucia, Dupuy Virginie, Thiaucourt François. 2014. Veterinary Microbiology, 173 (1-2) : 156-159.

Complete genome sequence of Mycoplasma putrefaciens strain 9231, one of the agents of contagious agalactia in goats. Dupuy Virginie, Sirand-Pugnet Pascal, Baranowski Eric, Barré Aurélien, Breton Marc, Couture Carole, Dordet-Frisoni Emilie, Gaurivaud Patrice, Jacob Daniel, Lemaitre Claire, Manso-Silvan Lucia, Nikolski Macha, Nouvel Laurent Xavier, Poumarat François, Tardy Florence, Thebault Patricia, Theil Sébastien, Citti Christine, Blanchard Alain, Thiaucourt François. 2013. Genome Announcements, 1 (3) : 00354-13.

Draft genome sequences of Mycoplasma alkalescens, Mycoplasma arginini, and Mycoplasma bovigenitalium, three species with equivocal pathogenic status for cattle. Manso-Silvan Lucia, Tardy Florence, Baranowski Eric, Barré Aurélien, Blanchard Alain, Breton Marc, Couture Carole, Citti Christine, Dordet-Frisoni Emilie, Dupuy Virginie, Gaurivaud Patrice, Jacob Daniel, Lemaitre Claire, Nikolski Macha, Nouvel Laurent Xavier, Poumarat François, Thebault Patricia, Theil Sébastien, Thiaucourt François, Sirand-Pugnet Pascal. 2013. Genome Announcements, 1 (3) : 00348-13.

Draft genome sequences of Mycoplasma auris, Mycoplasma arginini, and Mycoplasma yeatsii, two species of the ear canal of Caprinae. Dordet-Frisoni Emilie, Baranowski Eric, Barré Aurélien, Blanchard Alain, Breton Marc, Couture Carole, Dupuy Virginie, Gaurivaud Patrice, Jacob Daniel, Lemaitre Claire, Manso-Silvan Lucia, Nikolski Macha, Nouvel Laurent Xavier, Poumarat François, Sirand-Pugnet Pascal, Thebault Patricia, Theil Sébastien, Thiaucourt François, Citti Christine, Tardy Florence. 2013. Genome Announcements, 1 (3) : 00280-13.

Finishing bacterial genome assemblies with Mix. Soueidan Hayssam, Maurier Florence, Groppi Alexis, Sirand-Pugnet Pascal, Tardy Florence, Citti Christine, Dupuy Virginie, Nikolskii G.V.. 2013. BMC Bioinformatics, 14 (15), suppl., 11 p. Annual Research in Computational Molecular Biology. 11, Lyon, France, 17 Octobre 2013/19 Octobre 2013.

Evaluation of the relative importance between gene loss and gene gain during mollicute evolution. Sirand-Pugnet Pascal, Breton Marc, Dordet-Frisoni Emilie, Baranowski Eric, Barré Aurélien, Couture Carole, Dupuy Virginie, Gaurivaud Patrice, Jacob Daniel, Lemaitre Claire, Manso-Silvan Lucia, Nikolski Macha, Nouvel Laurent Xavier, Poumarat François, Tardy Florence, Thebault Patricia, Theil Sébastien, Citti Christine, Thiaucourt François, Blanchard Alain. 2012. In : 19th Congress of the International Organization for Mycoplasmology (IOM 2012), 15-20 July 2012, Toulouse, France. IOM. s.l. : s.n., 1 p. Congress of the International Organization for Mycoplasmology. 19, Toulouse, France, 15 Juillet 2012/20 Juillet 2012.

Evolutionary history of contagious bovine pleuropneumonia using next generation sequencing of mycoplasma mycoides subsp. mycoides "small colony". Dupuy Virginie, Manso-Silvan Lucia, Barbe Valérie, Thebault Patricia, Dordet-Frisoni Emilie, Citti Christine, Poumarat François, Blanchard Alain, Breton Marc, Sirand-Pugnet Pascal, Thiaucourt François. 2012. PloS One, 7 (10):e46821, 13 p.

Genetic architecture of sexual selection: QTL mapping of male song and female receiver traits in an acoustic moth. Limousin Denis, Streiff Réjane, Courtois Brigitte, Dupuy Virginie, Alem Sylvain, Greenfield Michael D.. 2012. PloS One, 7 (9):e44554, 13 p.

Phylogeny and molecular typing of Mycoplasma agalactiae and Mycoplasma bovis by multilocus sequencing. Manso-Silvan Lucia, Dupuy Virginie, Lysnyansky Inna, Ozdemir Umit, Thiaucourt François. 2012. Veterinary Microbiology, 161 (1-2) : 104-112.

Fatal outbreak of Mycoplasma capricolum pneumonia in endangered markhors. Ostrowski Stéphane, Thiaucourt François, Amirbekov Mulojon, Mahmadshoev Abdurahmon, Manso-Silvan Lucia, Dupuy Virginie, Vahobov Dustmurod, Ziyoev Orom, Michel Stefan. 2011. Emerging Infectious Diseases, 17 (12) : 2338-2341.

High molecular variability of sugarcane bacilliform viruses in Guadeloupe implying the existence of at least three new species. Muller Emmanuelle, Dupuy Virginie, Blondin Laurence, Bauffe Frédérique, Daugrois Jean-Heinrich, Laboureau Nathalie, Iskra Caruana Marie-Line. 2011. Virus Research, 160 (1-2) : 414-419.

Multi-locus sequence analysis of Mycoplasma carpicolum subsp. capripneumoniae for the molecular epidemiology of contagious caprine pleuropneumonia. Manso-Silvan Lucia, Dupuy Virginie, Chu Yuefeng, Thiaucourt François. 2011. Veterinary Research, 42 (86), 29 p.

Mycoplasma mycoides, from "mycoides Small Colony" to "capri". A microevolutionary perspective. Thiaucourt François, Manso-Silvan Lucia, Salah Woubit, Barbe Valérie, Vacherie Benoit, Jacob Daniel, Breton Marc, Dupuy Virginie, Lomenech Anne Marie, Blanchard Alain, Sirand-Pugnet Pascal. 2011. BMC Genomics, 12 (114), 19 p.

Multi-locus sequence analysis of Mycoplasma capricolum subsp. capripneumoniae for the molecular epidemiology of contagious caprine pleuropneumonia. Manso-Silvan Lucia, Dupuy Virginie, Thiaucourt François. 2010. In : 18th Congress of the International Organization of Mycoplasmology, 11th-16th July 2010, Chiancinao Terme, Italy. s.l. : s.n., 1 p. Congress of the International Organization of Mycoplasmology. 18, Chiancinao Terme, Italie, 11 Juillet 2010/16 Juillet 2010.

Multi-locus sequence typing for phylogeny and fine typing of Mycoplasma agalactiae strains. Manso-Silvan Lucia, Dupuy Virginie, Peyraud Armelle, Lysnyansky Inna, Ozdemir Umit, Türkyilmaz M., Thiaucourt François. 2010. In : 18th Congress of the International Organization of Mycoplasmology, 11th-16th July 2010, Chiancinao Terme, Italy. s.l. : s.n., 1 p. Congress of the International Organization of Mycoplasmology. 18, Chiancinao Terme, Italie, 11 Juillet 2010/16 Juillet 2010.

Incidence et variabilité du Sugarcane bacilliform virus (SCBV) en Guadeloupe. Muller Emmanuelle, Laboureau Nathalie, Dupuy Virginie, Caruana Marie-Line, Daugrois Jean-Heinrich, Bauffe Frédérique. 2005. In : Résumés des 10èmes Rencontres de virologie végétale, Aussois du 6 au 10 mars 2005. Brault Véronique, Ziegler-Graff Véronique. Strasbourg : CNRS, Résumé, 1 p. Rencontres de virologie végétale. 10, Aussois, France, 6 Mars 2005/10 Mars 2005.

Etude de la biologie et de la diversité du sugarcane bacilliform virus. Dupuy Virginie. 2003. Pau : UPPA, 32 p. Mémoire DESS : Protection et valorisation du végétal : Université de Pau et des Pays de l'Adour