Résultats pour Auteur : "Chopard, Jérôme"

Quantification of the pluriannual dynamics of grapevine growth responses to nitrogen supply using a Bayesian approach. Vrignon-Brenas Sylvain, Fontez Bénédicte, Bisson Anne, Rolland Gaëlle, Chopard Jérôme, Fumey Damien, Metay Aurélie, Pellegrino Anne. 2022. Journal of Experimental Botany, 73 (5) : 1385-1401.

Modelling transport of inhibiting and activating signals and their combined effects on floral induction: Application to apple tree. Belhassine Fares, Fumey Damien, Chopard Jérôme, Pradal Christophe, Martinez Sébastien, Costes Evelyne, Pallas Benoît. 2020. Scientific Reports, 10:13085, 14 p.

InfraPhenoGrid: A scientific workflow infrastructure for plant phenomics on the Grid. Pradal Christophe, Artzet Simon, Chopard Jérôme, Dupuis Dimitri, Fournier Christian, Mielewczik Michael, Nègre Vincent, Neveu Pascal, Parigot Didier, Valduriez Patrick, Cohen-Boulakia Sarah. 2017. Future Generation Computer Systems, 67 : 341-353.

Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities. Cohen-Boulakia Sarah, Belhajjame Khalid, Collin Olivier, Chopard Jérôme, Froidevaux Christine, Gaignard Alban, Hinsen Konrad, Larmande Pierre, Le Bras Yvan, Lemoine Frédéric, Mareuil Fabien, Ménager Hervé, Pradal Christophe, Blanchet Christophe. 2017. Future Generation Computer Systems, 75 : 284-298.

A computational framework for 3D mechanical modeling of plant morphogenesis with cellular resolution. Boudon Frédéric, Chopard Jérôme, Ali Olivier, Gilles Benjamin, Hamant Olivier, Boudaoud Arezki, Traas Jan, Godin Christophe. 2015. PLoS Computational Biology, 11 (1):e1003950, 16 p.

Auxin carriers localization drives auxin accumulation in plant cells infected by Frankia in Casuarina glauca actinorhizal nodules. Perrine-Walker Francine, Doumas Patrick, Lucas Mikaël, Vaissayre Virginie, Bauchemin Nicholas, Band Leah, Chopard Jérôme, Crabos Amandine, Conejero Geneviève, Péret Benjamin, King John, Verdeil Jean-Luc, Hocher Valérie, Franche Claudine, Bennett Malcolm J., Tisa Louis, Laplaze Laurent. 2010. Plant Physiology, 154 (3) : 1372-1380.

PlantGL : A python-based geometric library for 3D plant modelling at different scales. Pradal Christophe, Boudon Frédéric, Nouguier Christophe, Chopard Jérôme, Godin Christophe. 2009. Graphical Models, 71 : 1-21.

Flux-Based Transport enhancement as a plausible unifying mechanism for auxin transport in meristem development. Stoma Szymon, Lucas Mikaël, Chopard Jérôme, Schaedel Marianne, Traas Jan, Godin Christophe. 2008. PLoS Computational Biology, 4 (10):e1000207, 15 p.

Modelling foliage characteristics in 3D tree crowns : Influence on light interception and leaf irradiance. Parveaud Claude Eric, Chopard Jérôme, Dauzat Jean, Courbaud Benoît, Auclair Daniel. 2008. Trees, 22 (1) : 87-104.

SigFlow, a functional-structural model simulating floral induction based on inhibiting and activating signais transport in apple tree 3D structures. Belhassine Fares, Fumey Damien, Chopard Jérôme, Pradal Christophe, Martinez Sébastien, Costes Evelyne, Pallas Benoît. 2022. In : Proceedings of the XII International Symposium on Integrating Canopy, Rootstock and Environmental Physiology in Orchard Systems. Musacchi S. (ed.). Louvain : ISHS, 75-82. (Acta Horticulturae, 1346) ISBN 978-94-6261-345-4 International Symposium on integrating canopy, Rootstock and Environmental Physiology in Orchard Systems. 12, Wenatchee, États-Unis, 26 Juillet 2021/30 Juillet 2021.

A modelling framework for the simulation of signal transport within 3D structure: application for the simulation of within-tree variability in floral induction in apple trees. Belhassine Fares, Fumey Damien, Pradal Christophe, Chopard Jérôme, Costes Evelyne, Pallas Benoît. 2020. In : Book of abstracts of the 9th International Conference on Functional-Structural Plant Models: FSPM2020, 5 - 9 October 2020. Kahlen Katrin (ed.), Chen Tsu-Wei (ed.), Fricke Andreas (ed.), Stützel Hartmut (ed.). Hochschule Geisenheim University, University of Hannover. Hanovre : Institute of Horticultural Production Systems, Résumé, 16-17. International Conference on Functional-Structural Plant Models (FSPM 2020). 9, Allemagne, 5 Octobre 2020/9 Octobre 2020.

High-throughput phenotyping platform reveals genetic variability and quantitative trait loci of light-related parameters in maize models. Chen Tsu-Wei, Fournier Christian, Artzet Simon, Brichet Nicolas, Chopard Jérôme, Pradal Christophe, Alvarez-Prado Santiago, Cabrera-Bosquet Llorenç, Welcker Claude, Tardieu François. 2016. In : Seeking Sustainable Agricultural Solutions AgMIP6 Global Workshop: Oral and poster abstracts. Montpellier : AgMIP, Résumé, 55. Global Workshop of the Agricultural Model Intercomparison and Improvement Project (AgMIP), Montpellier, France, 28 Juin 2016/30 Juin 2016.

Scientific workflow for reusing plant/FSPM models. Chopard Jérôme, Pradal Christophe, Barbeau Daniel, Cokelaer Thomas, Godin Christophe. 2011. In : 19th International Congress on Modelling and Simulation (MODSIM2011), Perth, Australia, 12 to 16 December 2011. Chan F. (ed.), Marinova D. (ed.), Anderssen R.S. (ed.). Canberra : MSSANZ, 968-974. ISBN : 978-0-9872143-1-7 International Congress on Modelling and Simulation. 19, Perth, Australie, 12 Décembre 2011/16 Décembre 2011.

Phenomenal: a software framework for model-assisted analysis of high throughput plant phenotyping data. Fournier Christian, Artzet Simon, Chopard Jérôme, Mielewczik Michael, Brichet Nicolas, Cabrera Llorenç, Sirault X., Cohen-Boulakia Sarah, Pradal Christophe. 2015. . Louvain-la-Neuve : IAMPS, 2 p. International Workshop on Image Analysis Methods for the Plant Sciences (IAMPS). 4, Louvain-la-Neuve, Belgique, 21 Septembre 2015/22 Septembre 2015.

Genetic variability in light-related parameters of maize models revealed by linking 3D-reconstruction of plant architecture with light model and phenotyping platform. Chen Tsu-Wei, Fournier Christian, Artzet Simon, Brichet Nicolas, Chopard Jérôme, Pradal Christophe, Alvarez-Prado Santiago, Cabrera-Bosquet Llorenç, Welcker Claude, Tardieu François. 2016. In : IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016). Qingdao : s.n., 1 p. IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Qingdao, Chine, 7 Novembre 2016/11 Novembre 2016.

Modeling strategies using visual programming in OpenAlea. Pradal Christophe, Cokelaer Thomas, Barbeau Daniel, Moscardi Eric, Chopard Jérôme, Godin Christophe. 2010. In : Proceedings of the 6th International Workshop on Functional-Structural Plant Models, FSPM 2010, September 12-17, 2010, University of California, Davis (USA). Dejong Thedore M. (ed.), Da Silva David (ed.). University of California-Department of Plant Sciences. Davis : University of California, 113-115. International Workshop on Functional-Structural Plant Models. 6, Davis, États-Unis, 12 Septembre 2010/17 Septembre 2010.

OpenAlea: An open-source platform for the integration of heterogeneous FSPM components. Dufour-Kowalski Samuel, Pradal Christophe, Dones Nicolas, Barbier de Reuille Pierre, Boudon Frédéric, Chopard Jérôme, DaSilva D., Durand Jean-Baptiste, Ferraro Pascal, Fournier Christian, Guédon Yann, Ouangraoua A., Smith C., Stoma Szymon, Théveny Frédéric, Sinoquet Hervé, Godin C.. 2007. In : Proceedings : Abstracts of papers and posters of the 5th International Workshop on Functional Structural Plant Models, November 4-9, 2007, Napier, New Zealand. Eds by Prusinkiewicz P., Hanan J., Lane B. Napier : HortResearch, 36-1. International Workshop on Functional-Structural Plant Models. 5, Napier, Nouvelle-Zélande, 4 Novembre 2007/9 Novembre 2007.

3D modeling of water transfers in soil and roots systems. Chopard Jérôme. 2004. In : Proceedings of the 4th International workshop on functional-structural plant models (FSPM), abstracts of papers and posters, 7-11 June 2004, Montpellier, France. Godin Christophe (ed.), Hanan Jim (ed.), Kurth Winfried (ed.), Lacointe André (ed.), Takenaka Akio (ed.), Prusinkiewicz Przemyslaw (ed.), Dejong Thedore M. (ed.), Beveridge Christine (ed.). CIRAD-AMIS-UMR AMAP. Montpellier : CIRAD-AMAP, 154-158. International Workshop on Functional-Structural Plant Models (FSPM). 4, Montpellier, France, 7 Juin 2004/11 Juin 2004.

Interception de la pluie par des maquettes d'arbres en trois dimensions. Chopard Jérôme. 2002. Montpellier : ENSAM, 10 p. Mémoire DEA : Biologie de l'évolution et écologie : Ecole nationale supérieure agronomique de Montpellier

PlantGL : a python-based geometric library for 3D plant modelling at different scales. Pradal Christophe, Boudon Frédéric, Nouguier Christophe, Chopard Jérôme, Godin Christophe. 2007. Le Chesnay : INRIA, 42 p. (Rapport de recherche : INRIA. Thème BIO, 6367)