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Global transcriptome profiling reveals differential regulatory, metabolic and hormonal networks during somatic embryogenesis in Coffea arabica. Awada Rayan, Lepelley Maud, Breton David, Charpagne Aline, Campa Claudine, Berry Victoria, Georget Frederic, Breitler Jean-Christophe, Leran Sophie, Djerrab Doaa, Martinez-Seidel Federico, Descombes Patrick, Crouzillat Dominique, Bertrand Benoît, Etienne Hervé. 2023. BMC Genomics, 24:41, 19 p.

Unravelling the metabolic and hormonal machinery during key steps of somatic embryogenesis: A case study in coffee. Awada Rayan, Campa Claudine, Gibault Estelle, Dechamp Eveline, Georget Frederic, Lepelley Maud, Abdallah Cécile, Erban Alexander, Martinez-Seidel Federico, Kopka Joachim, Legendre Laurent, Leran Sophie, Conejero Geneviève, Verdeil Jean-Luc, Crouzillat Dominique, Breton David, Bertrand Benoît, Etienne Hervé. 2021. In : 28th Conference of Association for the Science and Information on Coffee - Books of abstracts. ASIC. Montpellier : ASIC, Résumé, p. 68. Conference of Association for the Science and Information on Coffee (ASIC 2021). 28, Montpellier, France, 28 Juin 2021/1 Juillet 2021.

An innovative automated active compound screening system allows high-throughput optimization of somatic embryogenesis in Coffea arabica. Awada Rayan, Verdier Dorothée, Froger Solène, Brulard Eric, de Faria Maraschin Simone, Etienne Hervé, Breton David. 2020. Scientific Reports, 10:810, 14 p.

Physiological plasticity: a key element of coffe hybrjds to face leaf rust disease attack. Toniutti Lucile, Breitler Jean-Christophe, Campa Claudine, Bertrand Benoît, Etienne Hervé, Lambot Charles, Herrera Juan Carlos. 2019. In : 27th Biennial ASIC Conference, Portland, 16-20 September 2018. Book of abstracts 2019. ASIC, SCA. Portland : ASIC, Résumé, 1 p. Biennial ASIC Conference. 27, Portland, États-Unis, 16 Septembre 2018/20 Septembre 2018.

Unravelling the metabolic and hormonal machinery during key steps of somatic embryogenesis: A case study in coffee. Awada Rayan, Campa Claudine, Gibault Estelle, Dechamp Eveline, Georget Frederic, Lepelley Maud, Abdallah Cécile, Erban Alexander, Martinez-Seidel Federico, Kopka Joachim, Legendre Laurent, Leran Sophie, Conejero Geneviève, Verdeil Jean-Luc, Crouzillat Dominique, Breton David, Bertrand Benoît, Etienne Hervé. 2019. International Journal of Molecular Sciences, 20 (19):4665, 29 p.

An altered circadian clock coupled with a higher photosynthesis efficiency could explain the better agronomic performance of a new coffee clone when compared with a standard variety. Toniutti Lucile, Breitler Jean-Christophe, Guittin Charlie, Doulbeau Sylvie, Etienne Hervé, Campa Claudine, Lambot Charles, Herrera Pinilla Juan-Carlos, Bertrand Benoît. 2019. International Journal of Molecular Sciences, 20 (3):736, 19 p.

Coffee somatic embryogenesis: How did research, experience gained and innovations promote the commercial propagation of elite clones from the two cultivated species. Etienne Hervé, Breton David, Breitler Jean-Christophe, Bertrand Benoît, Dechamp Eveline, Awada Rayan, Marraccini Pierre, Leran Sophie, Alpizar Edgardo, Campa Claudine, Courtel Philippe, Georget Frederic, Ducos Jean-Paul. 2018. Frontiers in Plant Science, 9:1630, 21p.

Patterns of adaptive genetic variation across Coffea canephora. Poncet Valérie, Tournebize Rémi, Aquino Sinara O., Marraccini Pierre, Mariac Cédric, Bethune Kevin, Andrade Alan A., Kiwuka Catherine, Crouzillat Dominique, Anten Niels P.R., Manel Stéphanie, De Kochko Alexandre. 2018. . Montpellier : ESEB, Résumé, 1 p. Joint Congress on Evolutionary Biology, Montpellier, France, 19 Août 2018/22 Août 2018.

Cultivating coffee quality - Terroir and agro-ecosystem. Lambot Charles, Herrera Juan Carlos, Bertrand Benoît, Sadeghian Siavosh, Benavides Pablo, Gaitan Alvaro. 2017. In : The craft and science of coffee. Folmer, Britta (ed.). Londres : Academic Press, 17-49. ISBN 978-0-12-803520-7

Influence of environmental conditions and genetic background of Arabica coffee (C. arabica L) on leaf rust (Hemileia vastatrix)pathogenesis. Toniutti Lucile, Breitler Jean-Christophe, Etienne Hervé, Campa Claudine, Doulbeau Sylvie, Urban Laurent, Lambot Charles, Pinilla Juan-Carlos H., Bertrand Benoît. 2017. Frontiers in Plant Science, 8:2025, 12 p.

The 'PUCE CAFE' project: The first 15K coffee microarray, a new tool for discovering candidate genes correlated to agronomic and quality traits. Privat Isabelle, Bardil Amélie, Bombarely Gomez Aureliano, Severac Dany, Dantec Christelle, Fuentes Ivanna, Mueller Lukas, Joët Thierry, Pot David, Foucrier Séverine, Dussert Stéphane, Leroy Thierry, Journot Laurent, De Kochko Alexandre, Campa Claudine, Combes Marie-Christine, Lashermes Philippe, Bertrand Benoît. 2011. BMC Genomics, 12 (5), 14 p.

Sequencing the coffee genome : Overall strategy and progress made in the frame of ICGN. Lashermes Philippe, Argout Xavier, Crouzillat Dominique, Priyono, Yepes M., Wincker Patrick. 2011. In : Proceedings of the 23rd International Conference on Coffee Science; Bali, Indonesia, October 3-8, 2010 = Actes du 23ème Colloque scientifique international sur le café, Bali, Indonésie, 3-8 octobre 2010. ASIC. Paris : ASIC, 410-413. ISBN 978-2-900212-22-6 International Conference on Coffee Science. 23, Bali, Indonésie, 3 Octobre 2010/8 Octobre 2010.

The Coffee Microarray Project: a new tool to discover candidate genes correlated to quality traits. Privat Isabelle, Bertrand Benoît, Lashermes Philippe. 2008. In : Abstracts of Plant and Animal Genomes XVIth Conference, San Diego, CA (USA), January 12-16, 2008. s.l. : s.n., Résumé Plant and Animal Genomes Conference. 16, San Diego, États-Unis, 12 Janvier 2008/16 Janvier 2008.

Les caféiers : Arabica, Coffea arabica L. (2n = 4x = 44), robusta, Coffea canephora Pierre ex A. Froehner (2n = 2x =22) (Rubiacées). Charmetant Pierre, Charrier André, Lambot Charles, Pétiard Vincent, Wintgens Jean Nicolas. 2006. In : Histoire et amélioration de cinquante plantes cultivées. Doré C. (ed.), Varoquaux F. (ed.). Paris : INRA, 163-181. (Savoir-faire) ISBN 2-7380-1215-9

Biochemical and molecular characterization of [alpha]-D-galactosidase from coffee beans. Marraccini Pierre, Rogers William John, Caillet Victoria, Deshayes Alain, Granato Dominique, Lausanne Françoise, Lechat Sylvianne, Pridmore David, Pétiard Vincent. 2005. Plant Physiology and Biochemistry, 43 : 909-920.

Coffee plant with reduced alfa-D-galactosidase activity. Marraccini Pierre, Deshayes Alain, Rogers William John. 2003. Genève : OMPI, 26 p. N° de dépôt européen : 01124160.1, N° de dépôt international : PCT/EPO2709148, N° de brevet international : WO03/032713 A2

Molecular cloning of a full-length cDNA and gene from Coffea arabica encoding a protein homologous to the yeast translation initiation factor SUI1: expression analysis in plant organs. Gaborit Charlotte, Caillet Victoria, Deshayes Alain, Marraccini Pierre. 2003. Brazilian Journal of Plant Physiology, 15 (1) : 55-58.

Rubisco small subunit of Coffea arabica: cDNA sequence, gene cloning and promoter analysis in transgenic tobacco plants. Marraccini Pierre, Courjault Carine, Caillet Victoria, Lausanne Françoise, Lepage Brigitte, Rogers William John, Tessereau Sylviane, Deshayes Alain. 2003. Plant Physiology and Biochemistry, 41 (1) : 17-25.

Molecular and biochemical characterization of endo-beta-mannanases from germinating coffee (Coffea arabica) grains. Marraccini Pierre, Rogers William John, Allard Cyril, André Marie-Laure, Caillet Victoria, Lacoste Nicolas, Lausanne Françoise, Michaux Stéphane. 2001. Planta, 213 : 296-308.

Biochemical and molecular characterization and expression of the 11S-type storage protein from Coffea arabica endosperm. Rogers William John, Bezard Vincent, Deshayes Alain, Meyer Inge, Pétiard Vincent, Marraccini Pierre. 1999. Plant Physiology and Biochemistry, 37 (4) : 261-272.

Genetically modified coffee trees resistant to the coffee leaf miner, Perileucoptera coffeella. Leroy Thierry, Henry A.M., Philippe René, Royer Monique, Deshayes Alain, Frutos Roger, Duris Daniel, Dufour Magali, Tessereau Sylviane, Jourdan Isabelle, Bossard G., Lacombe Catherine, Fenouillet Catherine. 1999. In : Biotechnology of Bacillus thuringiensis = [Biotechnologie de Bacillus thuringiensis]. Ziniu Y. (ed.), Ming S. (ed.), Ziduo L. (ed). Beijing : Science Press, 197. Pacific Rim Conference on Biotechnology. 3, Wuhan, Chine, 5 Octobre 1999/9 Octobre 1999.

Molecular cloning of the complete 11S seed storage protein gene of Coffea arabica and promoter analysis in transgenic tobacco plants. Marraccini Pierre, Deshayes Alain, Pétiard Vincent, Rogers William John. 1999. Plant Physiology and Biochemistry, 37 (4) : 273-282.