Parcourir par Mots clés libres

Celebrating the 20th anniversary of the first Xanthomonas genome sequences - how genomics revolutionized taxonomy, provided insight into the emergence of pathogenic bacteria, enabled new fundamental discoveries and helped developing novel control measures - a perspective from the French network on Xanthomonads. Koebnik Ralf, Cesbron Sophie, Chen Nicolas W.G., Fischer-Le Saux Marion, Hutin Mathilde, Jacques Marie Agnès, Noel Laurent D., Pérez-Quintero Alvaro L., Portier Perrine, Pruvost Olivier, Rieux Adrien, Szurek Boris. 2024. Peer Community Journal, 4:e19, 22 p.

High intraspecific growth variability despite strong evolutionary legacy in an Amazonian forest. Schmitt Sylvain, Herault Bruno, Derroire Géraldine. 2023. Ecology Letters, 26 (12) : 2135-2146.

Detection and genetic diversity of Mopeia virus in Mastomys natalensis from different habitats in the Limpopo National Park, Mozambique. Mapaco Lourenço, Crespin Laurent, Rodrigues Dércio, Goüy de Bellocq Joëlle, Bryja Josef, Bourgarel Mathieu, Missé Dorothée, Caron Alexandre, Fafetine José, Cappelle Julien, Liégeois Florian. 2022. Infection, Genetics and Evolution, 98:105204, 7 p.

Molecular epidemiology of peste des petits ruminants virus in Nigeria: An update. Mantip Samuel, Sigismeau Anthony, Shamaki David, Woma Timothy Yusuf, Kwiatek Olivier, Libeau Geneviève, Farougou Souabou, Bataille Arnaud. 2022. Transboundary and Emerging Diseases, 69 (3) : 1634-1640.

A polyphasic approach reveals novel genotypes and updates the genetic structure of the banana fusarium wilt pathogen. Mostert Diane, Wicker Emmanuel, de Jager Mignon M., Al Kaabi Saif M., O'Neill Wayne, Perry Suzy, Li Chunyu, Ganyun Yi, Pegg Kenneth G., Mostert Lizel, Viljoen Altus. 2022. Microorganisms, 10 (2):269, 18 p.

Cacao swollen shoot virus (Caulimoviridae). Muller Emmanuelle. 2021. In : Encyclopedia of virology. Volume 3. Bamford Dennis (ed.), Zuckerman Mark (ed.). Oxford : Academic Press, 274-284. ISBN 978-0-12-814515-9

Characterization of odor-active compounds of Ichang lemon (Citrus wilsonii Tan.) and identification of its genetic interspecific origin by DNA genotyping. Demarcq Benoit, Cavailles Margaux, Lambert Laetitia, Schippa Christine, Ollitrault Patrick, Luro François. 2021. Journal of Agricultural and Food Chemistry, 69 (10) : 3175-3188.

Free-living, psychrotrophic bacteria of the Genus Psychrobacter are descendants of pathobionts. Welter Daphne K., Ruaud Albane, Henseler Zachariah M., De Jong Hannah N., Van Coeverden de Groot Peter, Michaux Johan, Gormezano Linda, Waters Jillian L., Youngblut Nicholas D., Ley Ruth E.. 2021. mSystems, 6 (2), 20 p.

Identification, molecular and biological characterization of two novel secovirids in wild grass species in Belgium. Maclot François, Debue Virginie, Blouin Arnaud G., Fontdevilla Pareta Núria, Tamisier Lucie, Filloux Denis, Massart Sébastien. 2021. Virus Research, 298:198397, 6 p.

Insertion of badnaviral DNA in the late blight resistance gene (R1a) of eggplant (Solanum melongena). Serfraz Saad, Sharma Vikas, Maumus Florian, Aubriot Xavier, Geering Andrew D., Teycheney Pierre-Yves. 2021. Frontiers in Plant Science, 12:683681, 14 p.

Persistence of the historical lineage I of West Africa against the ongoing spread of the Asian lineage of peste des petits ruminants virus. Tounkara Kalidia, Kwiatek Olivier, Sidibé Cheick Abou Kounta, Sery Amadou, Dakouo Martin, Salami Habib, Lo Modou Moustapha, Ba Aminata, Diop Mariame, Niang Mamadou, Libeau Geneviève, Bataille Arnaud. 2021. Transboundary and Emerging Diseases, 68 (6) : 3107-3113.

The Windblown: Possible explanations for dinophyte DNA in forest soils. Gottschling Marc, Czech Lucas, Mahé Frédéric, Adl Sina, Dunthorn Micah. 2021. Journal of Eukaryotic Microbiology, 68 (1):e12833, 6 p.

The leguminous trees Vachellia seyal (Del.) and Prosopis juliflora (Swartz) DC and their association with rhizobial strains from the root-influence zone of the grass Sporobolus robustus Kunth. Fall Fatoumata, Le Roux Christine, Bâ Amadou Moustapha, Fall Dioumacor, Bakhoum Niokhor, Faye Mathieu Ndigue, Sadio Oumar, Diouf Diégane. 2021. Symbiosis, 84 : 61-69.

Large-scale survey reveals pervasiveness and potential function of endogenous geminiviral sequences in plants. Sharma Vikas, Lefeuvre Pierre, Roumagnac Philippe, Filloux Denis, Teycheney Pierre-Yves, Martin Darren Patrick, Maumus Florian. 2020. Virus Evolution, 6 (2):veaa071, 13 p.

RNA viruses of Amblyomma variegatum and Rhipicephalus microplus and cattle susceptibility in the French Antilles. Gondard Mathilde, Temmam Sarah, Devillers Elodie, Pinarello Valérie, Bigot Thomas, Chrétien Delphine, Aprelon Rosalie, Vayssier-Taussat Muriel, Albina Emmanuel, Eloit Marc, Moutailler Sara. 2020. Viruses, 12:144, 23 p.

Screening diversity and distribution of Copia retrotransposons reveals a specific amplification of BARE1 elements in genomes of the polyploid Hordeum murinum complex. Ourari Malika, Coriton Olivier, Martin Guillaume, Huteau Virginie, Keller Jean, Ainouche Malika Lily, Amirouche Rachid, Ainouche Abdelkader. 2020. Genetica, 148 (2) : 109-123.

Whole genome sequencing and phylogenetic characterization of a novel bat-associated picornavirus-like virus with an unusual genome organization. Temmam Sarah, Hul Vibol, Bigot Thomas, Bessaud Maël, Chrétien Delphine, Hoem Thavry, Gorman Christopher, Duong Veasna, Dussart Philippe, Cappelle Julien, Eloit Marc. 2020. Infection, Genetics and Evolution, 78:104130, 5 p.

A phylogenetic analysis of the biting midges belonging to Culicoides Latreille (Diptera: Ceratopogonidae) subgenus Avaritia using molecular data. Mathieu Bruno, Garros Claire, Balenghien Thomas, Candolfi Ermanno, Delecolle Delphine, Cetre-Sossah Catherine. 2020. Parasites and Vectors, 13:243, 12 p.

The tree that hides the forest: cryptic diversity and phylogenetic relationships in the Palaearctic vector Obsoletus/Scoticus Complex (Diptera: Ceratopogonidae) at the European level. Mignotte Antoine, Garros Claire, Gardes Laëtitia, Balenghien Thomas, Duhayon Maxime, Rakotoarivony Ignace, Tabourin Laura, Poujol Léa, Mathieu Bruno, Ibáñez-Justicia Adolfo, Deniz Ahmet, Cvetkovikj Aleksandar, Purse Bethan V., Ramilo David, et al.. 2020. Parasites and Vectors, 13:265, 13 p.

CRISPR elements provide a new framework for the genealogy of the citrus canker pathogen Xanthomonas citri pv. citri. Jeong Kwanho, Muñoz-Bodnar Alejandra, Arias Rojas Nathalia, Poulin Lucie, Rodríguez-R Luis Miguel, Gagnevin Lionel, Vernière Christian, Pruvost Olivier, Koebnik Ralf. 2019. BMC Genomics, 20:917, 19 p.

Genetic evidence for transboundary circulation of Peste Des Petits Ruminants across West Africa. Tounkara Kadidia, Kwiatek Olivier, Niang Mamadou, Sidibé Cheick Abou Kounta, Sery Amadou, Dakouo Martin, Salami Habib, Lo Modou Moustapha, Ba Aminata, Diop Mariame, El Mamy Ahmed Bezeid, El Arbi Ahmed Salem, Barry Yahya, Isselmou Ekaterina, Habiboullah Habiboullah, Lella Abdellahi Salem, Doumbia Baba, Baba Gueya Mohamed, Savadogo Joseph, Ouattara Lassina, Minougou Germaine, Libeau Geneviève, Bataille Arnaud. 2019. Frontiers in Veterinary Science, 6:275, 7 p.

Genetic, morphological and chemical investigations reveal the genetic origin of Pompia (C. medica tuberosa Risso & Poiteau) - An old endemic Sardinian citrus fruit. Luro François, Viglietti Grazia, Marchi Elodie, Costantino Gilles, Scarpia Maria Grazia, Tomi Félix, Paoli Mathieu, Curk Franck, Ollitrault Patrick. 2019. Phytochemistry, 168:112083, 10 p.

Next-generation sequencing on insectivorous bat guano : An accurate tool to identify arthropod viruses of potential agricultural concern. Bourgarel Mathieu, Noel Valérie, Pfukenyi Davies Mubika, Michaux Johan, André Adrien, Becquer Thierry, Cerqueira Frédérique, Barrachina Célia, Boué Vanina, Talignani Loïc, Matope Gift, Missé Dorothée, Morand Serge, Liégeois Florian. 2019. Viruses, 11:1102, 14 p.

The rhizosphere of the halophytic grass Sporobolus robustus Kunth hosts rhizobium genospecies that are efficient on Prosopis juliflora (Sw.) DC and Vachellia seyal (Del.) P.J.H. Hurter seedlings. Fall Fatoumata, Le Roux Christine, Bâ Amadou Moustapha, Fall Dioumacor, Bakhoum Niokhor, Faye Mathieu Ndigue, Kane Aboubacry, Ndoye Ibrahima, Diouf Diégane. 2019. Systematic and Applied Microbiology, 42 : 232-239.

Consistent patterns of high alpha and low beta diversity in tropical parasitic and free-living protists. Lentendu Guillaume, Mahé Frédéric, Bass David, Rueckert Sonja, Stoeck Thorsten, Dunthorn Micah. 2018. Molecular Ecology, 27 (13) : 2846-2857.

How endogenous plant pararetroviruses shed light on Musa evolution. Duroy Pierre-Olivier, Perrier Xavier, Laboureau Nathalie, Jacquemoud-Collet Jean-Pierre, Iskra Caruana Marie-Line. 2016. Annals of Botany, 117 (4) : 625-641.

Méthodes bioinformatiques d'analyse de l'histoire évolutive des familles de gènes : intégration de données, indices évolutifs, et analyses fonctionnelles appliquées aux familles de gènes impliquées dans la réponse des plantes aux stress environnementaux. Larivière Delphine. 2016. Montpellier : Montpellier SupAgro, 324 p. Thèse de doctorat : Biologie intégrative des plantes : Montpellier SupAgro

PCR-based identification of cacao black pod causal agents and identification of biological factors possibly contributing to Phytophthora megakarya's field dominance in West Africa. Ali Shahin, Amoako-Attah Ishmael, Bailey Rebecca, Strem Mary, Schmidt Martha, Yaw Akrofi Andrew, Surujdeo-Maharaj Surendra, Kolawole Oluwaseun O., Begoude Dider, Ten Hoopen Gerben Martijn, Goss Erica, Phillips-Mora Wilbert, Meinhardt Lyndel W., Bailey Bryan. 2016. Plant Pathology, 65 (7) : 1095-1108.

Description and phylogenetic placement of Beauveria hoplocheli sp. nov. used in the biological control of the sugarcane white grub, Hoplochelus marginalis, on Reunion Island. Robène-Soustrade Isabelle, Jouen Emmanuel, Pastou Didier, Payet-Hoarau Magali, Goble Tarryn, Linderme Daphné, Lefeuvre Pierre, Calmes Cédric, Reynaud Bernard, Nibouche Samuel, Costet Laurent. 2015. Mycologia, 107 (6) : 1221-1232.

Biosynthesis of wyosine derivatives in tRNA: An ancient and highly diverse pathway in Archaea. De Crécy-Lagard Valérie, Brochier-Armanet Céline, Urbonavicius Jaunius, Fernandez Bernard, Phillips Gabriela, Lyons Benjamin, Noma Akilo, Alvarez Sophie, Droogmans Louis, Armengaud Jean, Grosjean Henri. 2010. Molecular Biology and Evolution, 27 (9) : 2062-2077.