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Analysis of >3400 worldwide eggplant accessions reveals two independent domestication events and multiple migration‐diversification routes. Barchi Lorenzo, Aprea Giuseppe, Rabanus-Wallace Mark Timothy, Toppino Laura, Alonso David, Portis Ezio, Lanteri Sergio, Gaccione Luciana, Omondi Emmanuel, Van Zonneveld Maarten, Schafleitner Roland, Ferrante Paola, Börner Andreas, Stein Nils, Diez Maria José, Lefebvre Véronique, Salinier Jérémy, Boyaci Hatice Filiz, Finkers Richard, Brouwer Matthijs, Bovy Arnaud, Rotino Giuseppe Leonardo, Prohens Jaime, Giuliano Giovanni. 2023. The Plant Journal, 116 (6) : 1667-1680.

Crop modeling frameworks interoperability through bidirectional source code transformation. Midingoyi Cyrille Ahmed, Pradal Christophe, Enders Andreas, Fumagalli Davide, Lecharpentier Patrice, Raynal Hélène, Donatelli Marcello, Fanchini Davide, Athanasiadis Ioannis, Porter Cheryl, Hoogenboom Gerrit, Oliveira F.A.A., Holzworth Dean, Martre Pierre. 2023. Environmental Modelling and Software, 168:105790, 14 p.

Marker-assisted introgression of the salinity tolerance locus Saltol in temperate Japonica rice. Maré Caterina, Zampieri Elisa, Cavallaro Viviana, Frouin Julien, Grenier Cécile, Courtois Brigitte, Brottier Laurent, Tacconi Gianni, Finocchiaro Franca, Serrat Xavier, Nogués Salvador, Bundó Mireia, San Segundo Blanca, Negrini Noemi, Pesenti Michele, Sacchi Gian Attilio, Gavina Giacomo, Bovina Riccardo, Monaco Stefano, Tondelli Alessandro, Cattivelli Luigi, Valè Giampiero. 2023. Rice, 16:2, 18 p.

Marker-assisted pyramiding of blast-resistance genes in a japonica elite rice cultivar through forward and background selection. Zampieri Elisa, Volante Andrea, Maré Caterina, Orasen Gabriele, Desiderio Francesca, Biselli Chiara, Canella Marco, Carmagnola Lorena, Milazzo Joëlle, Adreit Henri, Tharreau Didier, Poncelet Nicolas, Vaccino Patrizia, Valè Giampiero. 2023. Plants, 12 (4), n.spéc. Advances in Genetics and Breeding of Grain Crops:757, 17 p.

Multi-environment association study highlights candidate genes for robust agronomic quantitative trait loci in a novel worldwide Capsicum core collection. McLeod Louis, Barchi Lorenzo, Tumino Giorgio, Tripodi Pasquale, Salinier Jérémy, Gros Christophe, Boyaci Filiz, Ozalp Ramazan, Borovsky Yelena, Schafleitner Roland, Barchenger Derek, Finkers Richard, Brouwer Matthijs, Stein Nils, Rabanus-Wallace Mark Timothy, Giuliano Giovanni, Voorrips Roeland, Paran Ilan, Lefebvre Véronique. 2023. The Plant Journal, 116 (5) : 1508-1528.

Pathotyping citrus ornamental relatives with Xanthomonas citri pv. citri and X. citri pv. aurantifolii refines our understanding of their susceptibility to these pathogens. Licciardello Grazia, Caruso Paola, Bella Patrizia, Boyer Claudine, Smith Malcolm W., Pruvost Olivier, Robène Isabelle, Cubero Jaime, Catara Vittoria. 2022. Microorganisms, 10 (5), n.spéc. Integrating Science on Xanthomonas and Xylella for Integrated Plant Disease Management:986, 14 p.

Crop2ML: An open-source multi-language modeling framework for the exchange and reuse of crop model components. Midingoyi Cyrille Ahmed, Pradal Christophe, Enders Andreas, Fumagalli Davide, Raynal Hélène, Donatelli Marcello, Athanasiadis Ioannis, Porter Cheryl, Hoogenboom Gerrit, Holzworth Dean, Garcia Frédérick, Thorburn Peter J., Martre Pierre. 2021. Environmental Modelling and Software, 142:105055, 15 p.

Global range expansion history of pepper (Capsicum spp.) revealed by over 10,000 genebank accessions. Tripodi Pasquale, Rabanus-Wallace Mark Timothy, Barchi Lorenzo, Kale Sandip, Esposito Salvatore, Acquadro Alberto, Schafleitner Roland, Van Zonneveld Maarten, Prohens Jaime, Diez Maria José, Börner Andreas, Salinier Jérémy, Caromel Bernard, Bovy Arnaud, Boyaci Filiz, Pasev Gancho, Brandt Ronny, Himmelbach Axel, Portis Ezio, Finkers Richard, Lanteri Sergio, Paran Ilan, Lefebvre Véronique, Giuliano Giovanni, Stein Nils. 2021. Proceedings of the National Academy of Sciences of the United States of America, 118 (34):e2104315118, 9 p.

Hornets and honey bees: A coevolutionary arms race between ancient adaptations and new invasive threats. Cappa Federico, Cini Alessandro, Bortolotti Laura, Poidatz Juliette, Cervo Rita. 2021. Insects, 12 (11), n.spéc. Arthropod Natural Enemies of Bees:1037, 17 p.

Genome wide association studies for japonica rice resistance to blast in field and controlled conditions. Volante Andrea, Tondelli Alessandro, Desiderio Francesca, Abbruscato Pamela, Menin Barbara, Biselli Chiara, Casella Laura, Singh Namrata, McCouch Susan, Tharreau Didier, Zampieri Elisa, Cattivelli Luigi, Valè Giampiero. 2020. Rice, 13:71, 17 p.

Reuse of process-based models: Automatic transformation into many programming languages and simulation platforms. Midingoyi Cyrille Ahmed, Pradal Christophe, Athanasiadis Ioannis, Donatelli Marcello, Enders Andreas, Fumagalli Davide, Garcia Frédérick, Holzworth Dean, Hoogenboom Gerrit, Porter Cheryl, Raynal Hélène, Thorburn Peter J., Martre Pierre. 2020. In Silico Plants, 3 (1):diaa007 : -20.

Common pheromone use among host-associated populations of the browntail moth, Euproctis chrysorrhoea, displaying different adult phenologies. Frago Enric, Wang H.L., Svensson Glenn P., Marques J.F., Hódar J.A., Boettner G.H., Ciornei C., Dormont Laurent, Elkinton J.S., Franzén M., Khrimian A., Marianelli L., Marziali L., Mas H., Perez Laorga E., Pérez-López J., Roques Alain, Simonca V., Anderbrant Olle. 2019. Entomologia Generalis, 39 (3-4) : 295-306.

Effects of water management and cultivar on carbon dynamics, plant productivity and biomass allocation in European rice systems. Oliver Viktoria, Cochrane Nicole, Magnusson Julia, Brachi Erika, Monaco Stefano, Volante Andrea, Courtois Brigitte, Valè Giampiero, Price Adam H., Teh Yit Arn. 2019. Science of the Total Environment, 685 : 1139-1151.

First report of TYLCV-IS141, a tomato yellow leaf curl virus recombinant infecting tomato plants carrying the Ty-1 resistance gene in Sardinia (Italy). Granier Martine, Tomassoli L., Manglli A., Nannini M., Peterschmitt Michel, Urbino Cica. 2019. Plant Disease, 103 (6) : 1437.

Noemi controls production of flavonoid pigments and fruit acidity and illustrates the domestication routes of modern citrus varieties. Butelli Eugenio, Licciardello Concetta, Ramadugu Chandrika, Durand-Hulak Marie, Celant Alessandra, Reforgiato Recupero Giuseppe, Froelicher Yann, Martin Cathie. 2019. Current Biology, 29 (1):e2 : 158-164.

Genomic prediction accounting for genotype by environment interaction offers an effective framework for breeding simultaneously for adaptation to an abiotic stress and performance under normal cropping conditions in rice. Ben Hassen Manel, Bartholome Jérôme, Valè Giampiero, Cao Tuong-Vi, Ahmadi Nourollah. 2018. G3 - Genes Genomes Genetics, 8 (7) : 2319-2332.

Rice diversity panel provides accurate genomic predictions for complex traits in the progenies of biparental crosses involving members of the panel. Ben Hassen Manel, Cao Tuong-Vi, Bartholome Jérôme, Orasen Gabriele, Colombi C., Rakotomalala J., Razafinimpiasa Lisy, Bertone C., Biselli Chiara, Volante Andrea, Desiderio Francesca, Jacquin Laval, Valè Giampiero, Ahmadi Nourollah. 2018. Theoretical and Applied Genetics, 131 (2) : 417-435.

Causes of variation among rice models in yield response to CO2 examined with Free-Air CO2 Enrichment and growth chamber experiments. Hasegawa Toshihiro, Li Tao, Yin Xinyou, Zhu Yan, Boote Kenneth J., Baker Jeff, Bregaglio Simone, Buis Samuel, Confalonieri Roberto, Fugice Job, Fumoto Tamon, Gaydon Donald, Kumar Soora Naresh, Lafarge Tanguy, Marcaida Manuel, Masutomi Yuji, Nakagawa Hitochi, Oriol Philippe, Ruget Françoise, Singh Upendra, Tang Liang, Tao Fulu, Wakatsuki Hitomi, Wallach Daniel, Wang Yulong, Wilson Lloyd Ted, Yang Lianxin, Yang Yubin, Yoshida Hiroe, Zhang Zhao, Zhu Jinyu. 2017. Scientific Reports, 7:14858, 13 p.

Changes in anthocyanin production during domestication of Citrus. Butelli Eugenio, Garcia-Lor Andrés, Licciardello Concetta, Las Casas Giuseppina, Hill Lionel, Reforgiato Giuseppe, Keremane Manjunath, Ramadugu Chandrika, Krueger Robert, Xu Qiang, Deng Xiuxin, Fanciullino Anne Laure, Froelicher Yann, Navarro Luis, Martin Cathie. 2017. Plant Physiology, 173 (4) : 2225-2242.

Evolutionary trajectories in plant-associated Pseudomonas and Xanthomonas strains. Scortichini Marco (ed.), Arnold Dawn (ed.), Pruvost Olivier (ed.), Jacques Marie Agnès (ed.), Bernal Adriana Jimena (ed.). 2020. Lausanne : Frontiers Media, 172 p. (Frontiers Research Topics) ISBN 978-2-88963-700-3

Towards modern olive polycultures. Rosati Adolfo, Barkaoui Karim, Lauri Pierre-Eric. 2023. In : The olive: Botany and production. Fabbri Andrea (ed.), Baldoni Luciana (ed.), Caruso Tiziano (ed.), Famiani Franco (ed.). Wallingford : CABI, 640-657. ISBN 978-1-78924-734-3

Traditional breeding. Caruso Marco, Smith Malcolm W., Froelicher Yann, Russo Giuseppe, Gmitter Frederick G. Jr.. 2020. In : The genus Citrus. Talon Manuel (ed.), Caruso Marco (ed.), Gmitter Fred (ed.). Amsterdam : Elsevier, 129-148. ISBN 978-0-12-812163-4

Agroforestry for fruit trees in Europe and Mediterranean North Africa. Lauri Pierre-Eric, Barkaoui Karim, Ater Mohammed, Rosati Adolfo. 2019. In : Agroforestry for sustainable agriculture. Mosquera-Losada María Rosa (ed.), Prabhu Ravi (ed.). Cambridge : Burleigh Dodds Science Publishing, 385-418. (Burleigh Dodds Series in Agricultural Science) ISBN 978-1-78676-220-7

Assessment of the host status of ornamental rutaceous species to Xanthomonas citri pathovars causing Citrus Bacterial Canker. [O.20]. Licciardello Grazia, Pruvost Olivier, Robene Isabelle, Cubero Jaime, Redondo C., Caruso A., Licciardello Concetta, Caruso Paola, Catara Vittoria. 2017. In : 15th Congress of the Mediterranean Phytopathological Union: Plant health sustaining Mediterranean ecosystems Abstracts book. MPU, Universidad de Córdoba. Cordoba : MPU, Résumé, 57. 15th Congress of the Mediterranean Phytopathological Union, Cordoba, Espagne, 20 Juin 2017/23 Juin 2017.

Genomic selection for water use efficiency in Japonica rice and evaluation of different parameters implicated on the accuracy level. [P 0778]. Ben Hassen Manel, Cao Tuong-Vi, Laval Jaquin, Colombi C., Orasen Gabriele, Rakotomalala J., Razafinimpiasa Lisy, Bertone C., Biselli Chiara, Cattivelli Luigi, Ahmadi Nourollah, Valè Giampiero. 2017. In : Proceedings Plant and Animal Genome XXV Conference. San Diego : PAG, 1 p. Plant and Animal Genome Conference. 25, San Diego, États-Unis, 14 Janvier 2017/18 Janvier 2017.

Is Xanthomonas citri subsp. citri (Xcc) knocking at the doors of the Mediterranean basin? Caruso Paola, Pavone R., Licciardello Concetta, Russo M.P., Catara Vittoria, Licciardello Grazia, Pruvost Olivier, Robene Isabelle, Cubero Jaime, Redondo C., Aysan Y., Cetinkaya-Yildiz R., Horuz S., Urso A., Timparano G.. 2017. In : 15th Congress of the Mediterranean Phytopathological Union: Plant health sustaining Mediterranean ecosystems Abstracts book. MPU, Universidad de Córdoba. Cordoba : MPU, 56. 15th Congress of the Mediterranean Phytopathological Union, Cordoba, Espagne, 20 Juin 2017/23 Juin 2017.

The risk assessment of introduction of citrus canker in the Mediterranean basin through citrus rutaceous relatives: ORPRAMed project. Caruso Paola, Catara Vittoria, Pruvost Olivier, Robène Isabelle, Licciardello Concetta, Timpanaro G., Aysan Y., Cetinkaya-Yildiz R., Pavone R., Cubero Jaime. 2016. In : Abstract book Sustainable citriculture: the role of applied knowledge. Mattos Dirceu (ed.), Fermino Carlos Eduardo (ed.), Moreira Novelli Valdenice (ed.), Alves de Azevedo Fernando (ed.), Della Coletta Filho Helvécio (ed.), Vicente Contador Zaccheo Paulo (ed.). IAC, IAPAR. Londrina : IAPAR, Résumé, 117-118. ISBN 978-85-88184-55-8 International Citrus Congress, Foz do Iguaçu, Brésil, 18 Septembre 2016/23 Septembre 2016.

Marker-assisted backcrossing for introgression of the saltol locus conferring salt stress tolerance in rice. [PE0856]. Maré Caterina, Zampieri Elisa, Tondelli Alessandro, Cavallaro Viviana, Finocchiaro Franca, Tacconi Gianni, Monaco Stefano, Canella Marco, Gennaro Massimo, Courtois Brigitte, Frouin Julien, Samper Patrick, Brottier Laurent, Cattivelli Luigi, Valè Giampiero. 2020. In : Abstracts workshops of the PAG XXVIII. San Diego : PAG, Résumé, 375-376. Plant and Animal Genome. 28, San Diego, États-Unis, 11 Janvier 2020/15 Janvier 2020.

Diversity panel provides accurate genomic estimate of breeding values for complex traits, within the progenies of biparental crosses involving members of the panel. Ben Hassen Manel, Cao Tuong-Vi, Jacquin Laval, Colombi C., Orasen Gabriele, Rakotomalala J., Razafinimpiasa Lisy, Bertone C., Volante Andrea, Biselli Chiara, Valè Giampiero, Ahmadi Nourollah. 2016. . Montpellier : CIRAD-Centre français du riz, Résumé, 1 p. International Symposium on Rice Functional Genomics. 14, Montpellier, France, 26 Septembre 2016/29 Septembre 2016.