The generation challenge programme comparative plant stress-responsive gene catalogue

Wanchana Samart, Thongjuea Supat, Jun Ulat Victor, Anacleto Mylah, Mauleon Ramil P., Conte Matthieu, Rouard Mathieu, Ruiz Manuel, Krishnamurthy Nandini, Sjolander Kimmen, Van Hintum Theo, Bruskiewich Richard. 2008. The generation challenge programme comparative plant stress-responsive gene catalogue. Nucleic Acids Research, 36 : 943-946.

https://doi.org/10.1093/nar/gkm798

Article de revue ; Article de revue à facteur d'impact Revue en libre accès total

Prévisualisation

Version publiée - Anglais
Utilisation soumise à autorisation de l'auteur ou du Cirad.
document_542255.pdf
Télécharger (3MB) | Prévisualisation

Résumé : The Generation Challenge Programme (GCP; www.generationcp.org) has developed an online resource documenting stress-responsive genes comparatively across plant species. This public resource is a compendium of protein families, phylogenetic trees, multiple sequence alignments (MSA) and associated experimental evidence. The central objective of this resource is to elucidate orthologous and paralogous relationships between plant genes that may be involved in response to environmental stress, mainly abiotic stresses such as water deficit (¿drought¿). The web-based graphical user interface (GUI) of the resource includes query and visualization tools that allow diverse searches and browsing of the underlying project database. The web interface can be accessed at http://dayhoff.generationcp.org.

Mots-clés Agrovoc : plante, stress, génie génétique, expression des gènes, facteur du milieu, banque de données, protéine végétale, phylogénie, séquence nucléotidique

Classification Agris : F30 - Génétique et amélioration des plantes
C30 - Documentation et information

Champ stratégique Cirad : Axe 1 (2005-2013) - Intensification écologique

Auteurs et affiliations