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Global transcriptome profiling reveals differential regulatory, metabolic and hormonal networks during somatic embryogenesis in Coffea arabica. Awada Rayan, Lepelley Maud, Breton David, Charpagne Aline, Campa Claudine, Berry Victoria, Georget Frederic, Breitler Jean-Christophe, Leran Sophie, Djerrab Doaa, Martinez-Seidel Federico, Descombes Patrick, Crouzillat Dominique, Bertrand Benoît, Etienne Hervé. 2023. BMC Genomics, 24:41, 19 p.

Description of an Arabica coffee ideotype for agroforestry cropping systems: A guideline for breeding more resilient new varieties. Breitler Jean-Christophe, Etienne Hervé, Leran Sophie, Marie Lison, Bertrand Benoît. 2022. Plants, 11 (16):2133, 24 p.

Shade effects on yield across different Coffea arabica cultivars — how much is too much? A meta-analysis. Koutouleas Athina, Sarzynski Thuan, Bertrand Benoît, Bordeaux Mélanie, Skovmand Bosselmann Aske, Campa Claudine, Etienne Hervé, Turreira-Garcia Nerea, Leran Sophie, Markussen Bo, Marraccini Pierre, Cochicho Ramalho José, Vaast Philippe, Raebild Anders. 2022. Agronomy for Sustainable Development, 42:55, 13 p.

Photoperiod-dependent transcriptional modifications in key metabolic pathways in Coffea arabica. Djerrab Doaa, Bertrand Benoît, Breitler Jean-Christophe, Leran Sophie, Dechamp Eveline, Campa Claudine, Barrachina Célia, Conejero Geneviève, Etienne Hervé, Sulpice Ronan. 2021. Tree Physiology, 41 (2) : 302-316.

Full moonlight-induced circadian clock entrainment in Coffea arabica. Breitler Jean-Christophe, Djerrab Doaa, Leran Sophie, Toniutti Lucile, Guittin Charlie, Severac Dany, Pratlong Marine, Dereeper Alexis, Etienne Hervé, Bertrand Benoît. 2020. BMC Plant Biology, 20:24, 11 p.

Functional characterization of the arabidopsis abscisic acid transporters NPF4.5 and NPF4.6 in xenopus oocytes. Leran Sophie, Noguero Mélanie, Corratgé-Faillie Claire, Boursiac Yann, Brachet Chantal, Lacombe Benoit. 2020. Frontiers in Plant Science, 11:144, 6 p.

Unravelling the metabolic and hormonal machinery during key steps of somatic embryogenesis: A case study in coffee. Awada Rayan, Campa Claudine, Gibault Estelle, Dechamp Eveline, Georget Frederic, Lepelley Maud, Abdallah Cécile, Erban Alexander, Martinez-Seidel Federico, Kopka Joachim, Legendre Laurent, Leran Sophie, Conejero Geneviève, Verdeil Jean-Luc, Crouzillat Dominique, Breton David, Bertrand Benoît, Etienne Hervé. 2019. International Journal of Molecular Sciences, 20 (19):4665, 29 p.

Coffee somatic embryogenesis: How did research, experience gained and innovations promote the commercial propagation of elite clones from the two cultivated species. Etienne Hervé, Breton David, Breitler Jean-Christophe, Bertrand Benoît, Dechamp Eveline, Awada Rayan, Marraccini Pierre, Leran Sophie, Alpizar Edgardo, Campa Claudine, Courtel Philippe, Georget Frederic, Ducos Jean-Paul. 2018. Frontiers in Plant Science, 9:1630, 21p.

Temporal transcriptional logic of dynamic regulatory networks underlying nitrogen signaling and use in plants. Varala Kranthi, Marshall-Colón Amy, Cirrone Jacopo, Brooks Matthew D., Pasquino Angelo V., Leran Sophie, Mittal Shipra, Rock Tara M., Edwards Molly B., Kim Grace J., Ruffel Sandrine, McCombie Richard, Shasha Dennis, Coruzzi Gloria M.. 2018. Proceedings of the National Academy of Sciences of the United States of America, 115 (25) : 6494-6499.

The nitrate transporter family protein LjNPF8.6 controls the N-fixing nodule activity. Totev Valkov Vladimir, Rogato Alessandra, Martins Alves Ludovico, Sol Stefano, Noguero Mélanie, Leran Sophie, Lacombe Benoit, Chiurazzi Maurizio. 2017. Plant Physiology, 175 : 1269-1282.

Multiple mechanisms of nitrate sensing by Arabidopsis nitrate transceptor NRT1.1. Bouguyon E., Brun F., Meynard Donaldo, Kubes M., Pervent M., Leran Sophie, Lacombe Benoit, Krouk G., Guiderdoni Emmanuel, Zazimalova E., Hoyerova K., Nacry Philippe, Gojon A.. 2015. Nature Plants, 1 (3):15015, 8 p.

New varieties for innovative agroforestry coffee systems. Bertrand Benoît, Breitler Jean-Christophe, Georget Frederic, Penot Eric, Bordeaux Mélanie, Marraccini Pierre, Leran Sophie, Campa Claudine, Bonato Olivier, Villain Luc, Etienne Hervé. 2019. In : The agroecological transition of agricultural systems in the Global South. Côte François-Xavier (ed.), Poirier-Magona Emmanuelle (ed.), Perret Sylvain (ed.), Roudier Philippe (ed.), Bruno Rapidel (ed.), Thirion Marie-Cécile (ed.). Versailles : Ed. Quae, 161-176. (Agricultures et défis du monde) ISBN 978-2-7592-3056-3

De nouvelles variétés pour des systèmes caféiers agroforestiers innovants. Bertrand Benoît, Breitler Jean-Christophe, Georget Frederic, Penot Eric, Bordeaux Mélanie, Marraccini Pierre, Leran Sophie, Campa Claudine, Bonato Olivier, Villain Luc, Etienne Hervé. 2018. In : La transition agro-écologique des agricultures du Sud. Côte François-Xavier (ed.), Poirier-Magona Emmanuelle (ed.), Perret Sylvain (ed.), Roudier Philippe (ed.), Bruno Rapidel (ed.), Thirion Marie-Cécile (ed.). Versailles : Ed. Quae, 231-256. (Agricultures et défis du monde) ISBN 978-2-7592-2824-9

Creating new coffee varieties to cope with climate changes: current knowledge and future challenges. Marraccini Pierre, De Aquino Oliveira Sinara, Torres Luana F., Alves G.C.S., Breitler Jean-Christophe, Campa Claudine, Leran Sophie, Villain Luc, Georget Frederic, De Kochko Alexandre, Poncet Valérie, Andrade Alan Carvalho, Etienne Hervé, Bertrand Benoît. 2018. In : Abstracts of 12th IPMB2018. Agropolis Fondation, MUSE, l'INRA, le CNRS, Montpellier SupAgro, l'Université de Montpellier, l'IRD, CIRAD, la SFBV, le Labex Tulip, la SPS, Molecular Plant, The Plant Cell, Communications Biology, la Région Occitanie - Pyrénées/Méditerranée. Montpellier : IPMB, 2 p. Congress of the International Plant Molecular Biology ( IPMB2018). 12, Montpellier, France, 5 Août 2018/10 Août 2018.

Study of circadian regulation of primary metabolism in coffee plant is key to develop coffee varieties adapted to climate change. Breitler Jean-Christophe, Toniutti Lucile, Djerrab Doaa, Leran Sophie, Campa Claudine, Etienne Hervé, Bertrand Benoît. 2021. In : 28th Conference of Association for the Science and Information on Coffee - Books of abstracts. ASIC. Montpellier : ASIC, Résumé, p. 39. Conference of Association for the Science and Information on Coffee (ASIC 2021). 28, Montpellier, France, 28 Juin 2021/1 Juillet 2021.

Unravelling the metabolic and hormonal machinery during key steps of somatic embryogenesis: A case study in coffee. Awada Rayan, Campa Claudine, Gibault Estelle, Dechamp Eveline, Georget Frederic, Lepelley Maud, Abdallah Cécile, Erban Alexander, Martinez-Seidel Federico, Kopka Joachim, Legendre Laurent, Leran Sophie, Conejero Geneviève, Verdeil Jean-Luc, Crouzillat Dominique, Breton David, Bertrand Benoît, Etienne Hervé. 2021. In : 28th Conference of Association for the Science and Information on Coffee - Books of abstracts. ASIC. Montpellier : ASIC, Résumé, p. 68. Conference of Association for the Science and Information on Coffee (ASIC 2021). 28, Montpellier, France, 28 Juin 2021/1 Juillet 2021.

Coffee somatic embryogenesis, a model to decipher fundamental mechanisms associated to totipotency, somaclonal variation and photo-autotrophy acquisition. Etienne Hervé, Breitler Jean-Christophe, Bertrand Benoît, Dechamp Eveline, Marraccini Pierre, Leran Sophie, Campa Claudine, Duangsodsri Teerarat, Georget Frederic, Awada Rayan. 2019. In : 27th Biennial ASIC Conference, Portland, 16-20 September 2018. Book of abstracts 2019. ASIC, SCA. Portland : ASIC, Résumé, 1 p. Biennial ASIC Conference. 27, Portland, États-Unis, 16 Septembre 2018/20 Septembre 2018.

A global approach to decipher molecular basis of coffee tree adaptation to shade. Duangsodsri Teerarat, Leran Sophie, Villegas A.M., Vestalys I., Artins A., Etienne Hervé, Breitler Jean-Christophe, Villain Luc, Bertrand Benoît, Campa Claudine. 2019. In : 4th World Congress on Agroforestry. Book of abstracts. Dupraz Christian (ed.), Gosme Marie (ed.), Lawson Gerry (ed.). CIRAD, INRA, World Agroforestry, Agropolis International, MUSE. Montpellier : CIRAD-INRA, Résumé, p. 749. World Congress on Agroforestry. 4, Montpellier, France, 20 Mai 2019/22 Mai 2019.

Addressing climate change in coffee farming: development of a methodology to select for drought tolerance in coffee varieties. Darracq Olivier, Leran Sophie, Aberkane Hafid, Palacios Algenis, Castillo Jonny, Bordeaux Mélanie, Marie Lison, Arigoni Fabrizio, Etienne Hervé, Bertrand Benoît, Marraccini Pierre. 2023. In : Book of abstracts of the 29th conference ASIC 2023. ASIC, VAAS. Hanoï : ASIC, p. 130. ASIC Conference on Coffee Science. 29, Hanoï, Viet Nam, 11 Septembre 2023/14 Septembre 2023.

Microscopic analysis of root cellular architecture in different coffee species: a preliminary comparison of the main phenotypical traits in controlled conditions. Crisafulli Paola, Bordeaux Mélanie, Georget Frederic, Lefort Eveline, Leran Sophie, Neumann Kerstin, Navarini Luciano. 2023. In : Book of abstracts of the 29th conference ASIC 2023. ASIC, VAAS. Hanoï : ASIC, p. 129. ASIC Conference on Coffee Science. 29, Hanoï, Viet Nam, 11 Septembre 2023/14 Septembre 2023.