Résultats pour : "transcription"

DNA transposons favor de novo transcript emergence through enrichment of transcription factor binding motifs. Lebherz Marie Kristin, Fouks Bertrand, Schmidt Julian, Bornberg-Bauer Erich, Grandchamp Anna. 2024. Genome Biology and Evolution, 16 (7), 16 p.

The bZIP transcription factor BIP1 of the rice blast fungus is essential for infection and regulates a specific set of appressorium genes. Lambou Karine, Tag Andrew, Lassagne Alexandre, Collemare Jérôme, Clergeot Pierre-Henri, Barbisan Crystel, Perret Phillippe, Tharreau Didier, Millazo Joelle, Chartier Elia, De Vries Ronald P., Hirsch Judith, Morel Jean-Benoit, Beffa Roland, Kroj Thomas, Thomas Terry, Lebrun Marc-Henri. 2024. PLoS Pathogens, 20 (1):e1011945, 30 p.

GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways. Safi Alaeddine, Medici Anna, Szponarski Wojciech, Martin Florence, Clément-Vidal Anne, Marshall-Colón Amy, Ruffel Sandrine, Gaymard F., Rouached Hatem, Leclercq Julie, Coruzzi Gloria M., Lacombe Benoit, Krouk G.. 2021. Journal of Experimental Botany, 72 (10) : 3881-3901.

NIN-like protein transcription factors regulate leghemoglobin genes in legume nodules. Jiang Suyu, Jardinaud Marie-Françoise, Gao Jinpeng, Pecrix Yann, Wen Jiangqi, Mysore Kirankumar, Xu Ping, Sanchez-Canizares Carmen, Ruan Yiting, Li Qiujiu, Zhu Meijun, Li Fuyu, Wang Ertao, Poole Phillip S., Gamas Pascal, Murray Jeremy D.. 2021. Science, 374 (6567) : 625-628.

Vers un ciblage de la recombinaison méiotique chez le riz. Fayos Ian, Petit Julie, Courtois Brigitte, Droc Gaëtan, Nicolas Alain, Guiderdoni Emmanuel. 2020. Le Sélectionneur Français (71) : 33-41. Journée Scientifique ASF, Versailles, France, 6 Février 2020.

Le génome du cacaoyer : du décodage de sa séquence jusqu'à l'étude de gènes impliqués dans des caractères agronomiques d'intérêt. Argout Xavier. 2017. Montpellier : Montpellier SupAgro, 238 p. Thèse de doctorat : Biologie, interactions, diversité adaptative des plantes : Montpellier SupAgro

Identification of candidate genes for drought tolerance in coffee by high-throughput sequencing in the shoot apex of different Coffea arabica cultivars. Souto Mofatto Luciana, De Araújo Carneiro Fernanda, Gomes Vieira Natalia, Duarte Karoline Estefani, Vidal Ramon Oliveira, Alekcevetch Jean Carlos, Guitton Cotta Michelle, Verdeil Jean-Luc, Lapeyre-Montes Fabienne, Lartaud Marc, Leroy Thierry, De Bellis Fabien, Pot David, Costa Rodrigues Gustavo, Falsarella Carazzolle Marcelo, Guimarães Pereira Gonçalo Amarante, Carvalho Andrade Alan, Marraccini Pierre. 2016. BMC Plant Biology, 16 (94), 18 p.

Modelling the influence of dimerisation sequence dissimilarities on the auxin signalling network. Legrand Jonathan, Léger Jean-Benoist, Robin Stéphane, Vernoux Teva, Guédon Yann. 2016. BMC Systems Biology, 10 (22), 17 p.

The greater phenotypic homeostasis of the allopolyploid Coffea arabica improved the transcriptional homeostasis over that of both diploid parents. Bertrand Benoît, Bardil Amélie, Baraille Hélène, Dussert Stéphane, Doulbeau Sylvie, Dubois Emeric, Severac Dany, Dereeper Alexis, Etienne Hervé. 2015. Plant and Cell Physiology, 56 (10) : 2035-2051.

De novo transcriptome analysis of Hevea brasiliensis# tissues by RNA-seq and screening for molecular markers. Rippel Salgado Leonardo, Martins Koop Daniela, Guariz Pinheiro Daniel, Rivallan Ronan, Le Guen Vincent, Nicolás Marisa Fabiana, De Almeida Luiz Gonzaga Paula, Ribeiro Rocha Viviani, Magalhaes Milena, Gerber Alexandra Lehmkuhl, Figueira Antonio, De Mattos Cascardo Julio Cézar, Ribeiro de Vasconcelos Ana Tereza, Araújo Silva Wilson, Coutinho Luiz Lehmann, Garcia Dominique. 2014. BMC Genomics, 15 (236), 15 p.

Functional analysis of the durum wheat gene TdPIP2;1 and itspromoter region in response to abiotic stress in rice. Ayadi Malika, Mieulet Delphine, Fabre Denis, Verdeil Jean-Luc, Vernet Aurore, Guiderdoni Emmanuel, Masmoudi Khaled. 2014. Plant Physiology and Biochemistry, 79 : 98-108.

Genome wide profiling of Azospirillum lipoferum 4B gene expression during interaction with rice roots. Drogue Benoit, Sanguin Hervé, Borland Stéphanie, Prigent-Combaret Claire, Wisniewski-Dyé Florence. 2014. FEMS Microbiology, Ecology, 87 (2) : 543-555.

Plant root transcriptome profiling reveals a strain-dependent response during Azospirillum-rice cooperation. Drogue Benoit, Sanguin Hervé, Chamam Amel, Mozar Michael, Llauro Christel, Panaud Olivier, Prigent-Combaret Claire, Picault Nathalie, Wisniewski-Dyé Florence. 2014. Frontiers in Plant Science, 5 (607), 14 p.

Regulation of galactomannan biosynthesis in coffee seeds. Joët Thierry, Laffargue Andréina, Salmona Jordi, Doulbeau Sylvie, Descroix Frédéric, Bertrand Benoît, Lashermes Philippe, Dussert Stéphane. 2014. Journal of Experimental Botany, 65 (1) : 323-337.

SALT-RESPONSIVE ERF1 is a negative regulator of grain filling and gibberellin-mediated seedling establishment in rice. Schmidt Romy, Schippers Jos H.M., Mieulet Delphine, Watanabe Mutsumi, Hoefgen Rainer, Guiderdoni Emmanuel, Mueller-Roeber Bernd. 2014. Molecular Plant, 7 (2) : 404-421.

Sequence and expression analyses of ethylene response factors highly expressed in latex cells from Hevea brasiliensis. Piyatrakul Piyanuch, Yang Meng, Putranto Riza Arief, Pirrello Julien, Dessailly Florence, Hu Songnian, Summo Marilyne, Theeravatanasuk Kannikar, Leclercq Julie, Kuswanhadi, Montoro Pascal. 2014. PloS One, 9 (6):e99367, 20 p.

Understanding Anaplasmataceae pathogenesis using "Omics" approaches. Pruneau Ludovic, Moumène Amal, Meyer Damien, Marcelino Isabel, Lefrançois Thierry, Vachiery Nathalie. 2014. Frontiers in Cellular and Infection Microbiology, 4 (96), 7 p.

Analysis of the expression of the AGL17-like clade of MADS-box transcription factors in rice. Puig Jérôme, Meynard Donaldo, Khong Ngan Giang, Pauluzzi Germain, Guiderdoni Emmanuel, Gantet Pascal. 2013. Gene Expression Patterns, 13 (5-6) : 160-170.

Caractérisation des gènes AP2/ERF impliqués dans le développement chez Hevea brasiliensis. Piyatrakul Piyanuch. 2013. Montpellier : Montpellier SupAgro, 134 p. Thèse de doctorat : Systèmes intégrés en biologie, agronomie, géosciences, hydrosciences et environnement. Biologie intégrative des plantes : Montpellier SupAgro Centre international d'études supérieures en sciences agronomiques

Comparative transcriptome analysis of three oil palm fruit and seed tissues that differ in oil content and fatty acid composition. Dussert Stéphane, Guérin Chloé, Andersson Mariette, Joët Thierry, Tranbarger Timothy John, Pizot Maxime, Gautier Sarah, Omoré Alphonse, Durand-Gasselin Tristan, Morcillo Fabienne. 2013. Plant Physiology, 162 (3) : 1337-1358.

Contribution of subgenomes to the transcriptome and their intertwined regulation in the allopolyploid Coffea arabica grown at contrasted temperatures. Combes Marie-Christine, Dereeper Alexis, Severac Dany, Bertrand Benoît, Lashermes Philippe. 2013. New Phytologist, 200 (1) : 251-260.

MULTIPASS, a rice R2R3-type MYB transcription factor, regulates adaptive growth by integrating multiple hormonal pathways. Schmidt Romy, Schippers Jos H.M., Mieulet Delphine, Obata Toshihiro, Fernie Alisdair R., Guiderdoni Emmanuel, Mueller-Roeber Bernd. 2013. Plant Journal, 76 (2) : 258-273.

Analyse du transcriptome d'Ehrlichia ruminantium agent causal de la cowdriose : mise en évidence des gènes impliqués dans la virulence et les mécanismes d'atténuation et application à l'élaboration d'un vaccin recombinant. Pruneau Ludovic. 2012. Pointe-à-Pitre : UAG, 178 p. Thèse de doctorat : Sciences de la vie. Aspect moléculaires et cellulaires de la biologie : Université des Antilles et de la Guyane

Deep sequencing reveals differences in the transcriptional landscapes of fibers from two cultivated species of cotton. Lacape Jean-Marc, Claverie Michel, Vidal Ramon Oliveira, Carazzolle Marcelo Falsarella, Guimarães Pereira Gonçalo Amarante, Ruiz Manuel, Pré Martial, Llewellyn Danny, Al-Ghazi Yves, Jacobs John, Dereeper Alexis, Huguet Stéphanie, Giband Marc, Lanaud Claire. 2012. PloS One, 7 (11):e48855, 16 p.

Global gene expression profiling of Ehrlichia ruminantium at different stages of development. Pruneau Ludovic, Emboule Loïc, Gely Pryscellia, Marcelino Isabel, Mari Bernard, Pinarello Valérie, Sheikboudou Christian, Martinez Dominique, Daigle France, Lefrançois Thierry, Meyer Damien, Vachiery Nathalie. 2012. FEMS Immunology and Medical Microbiology, 64 (1) : 66-73.

Mutator system derivatives isolated from sugarcane genome sequence. Manetti M.E., Rossi Magdalena, Cruz Guilherme Marcelo Queiroga, Saccaro N.L., Nakabashi M., Altebarmakian V., Rodier-Goud Marguerite, Domingues Douglas S., D'Hont Angélique, Van Sluys Marie-Anne. 2012. Tropical Plant Biology, 5 (3) : 233-243.

Quels sont les enjeux au cours de l'évolution du bananier qui ont conduit au maintien de séquences virales de Banana streak virus dans son génome ? Duroy Pierre-Olivier. 2012. Montpellier : UM2, 213 p. Thèse de doctorat : Systèmes intégrés en biologie, agronomie, géosciences, hydrosciences et environnement (SIBAGHE). Biologie intégrative des plantes : Université Montpellier 2

RNA interference against animal viruses : How morbilliviruses generate extended diversity to escape small interfering RNA control. Holz Carine, Albina Emmanuel, Minet Cécile, Lancelot Renaud, Kwiatek Olivier, Libeau Geneviève, Servan de Almeida Renata. 2012. Journal of Virology, 86 (2) : 786-795.

Transcriptional response of Pseudomonas aeruginosa to a phosphate-deficient Lolium perenne rhizosphere. Zysko Agnieszka, Sanguin Hervé, Hayes Andrew, Wardleworth Leanne, Zeef Leo A. H., Sim Allan, Paterson Eric, Singh Brajesh K., Kertesz Michael A.. 2012. Plant and Soil, 359 (1-2) : 25-44.

Plasticité d'un allopolyploïde C. arabica en comparaison à ses espèces parentales diploïdes : variations de l'expression des gènes sous stress thermiques. Bardil Amélie. 2011. Montpellier : UM2, 216 p. Thèse de doctorat : Sciences : Université Montpellier 2

Deciphering transcriptional networks that govern Coffea arabica seed development using combined cDNA array and real-time RT-PCR approaches. Salmona Jordi, Dussert Stéphane, Descroix Frédéric, De Kochko Alexandre, Bertrand Benoît, Joët Thierry. 2008. Plant Molecular Biology, 66 (1-2) : 105-124.

Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice. Lacombe Séverine, Nagasaki Hiroshi, Santi Carole, Duval David, Piegu Benoît, Bangratz Martine, Breitler Jean-Christophe, Guiderdoni Emmanuel, Brugidou Christophe, Hirsch Judith, Cao Xiaofeng, Brice Claire, Panaud Olivier, Karlowski Wojciech M., Sato Yutaka, Echeverria Manuel. 2008. BMC Plant Biology, 8 (123), 19 p.

Towards the understanding of the cocoa transcriptome: Production and analysis of an exhaustive dataset of ESTs of Theobroma cacao L. generated from various tissues and under various conditions. Argout Xavier, Fouet Olivier, Wincker Patrick, Gramacho Karina Peres, Legavre Thierry, Sabau Xavier, Risterucci Ange-Marie, Da Silva Corinne, Cascardo Julio Cezar M., Allègre Mathilde, Kuhn David N., Verica Joseph, Courtois Brigitte, Loor Rey Gaston, Babin Régis, Sounigo Olivier, Ducamp Michel, Guiltinan Mark J., Ruiz Manuel, Alemanno Laurence, Machado Regina, Phillips Wilbert, Schnell Raymond J., Gilmour Martin, Rosenquist Eric, Butler David R., Maximova Siela N., Lanaud Claire. 2008. BMC Genomics, 9 (512), 19 p.

Development of genomic microsatellite markers in Coffea canephora and their transferability to other coffee species. Poncet Valérie, Dufour Magali, Hamon Perla, Hamon Serge, De Kochko Alexandre, Leroy Thierry. 2007. Genome (Ottawa), 50 (12) : 1156-1161.

Analysis of citrus ESTs from standard and normalized full length cDNA libraries. Terol Javier F., Agusti Javier, Alos Enriqueta, Andres Fernando, Argout Xavier, Brumos Javier, Carrillo Jose A., Cercos Manuel, Colmenero Jose M., Conejero Vicente, Conesa Ana, Courtois Brigitte, Dossat Carole, Iglesias Domingo, Legaz Francisco, Morillon Raphaël, Navarro Luis, Ollitrault Patrick, Soler Guillermo, Tadeo Francisco, Wincker Patrick, Talon Manuel. 2005. In : Abstracts of Plant and Animal Genomes XIIIth Conference, San Diego, CA (USA), January 15-19, 2005. s.l. : s.n., Résumé Plant and Animal Genomes Conference. 13, San Diego, États-Unis, 15 Janvier 2005/19 Janvier 2005.

EgMYB2, a new transcriptional activator from Eucalyptus xylem, regulates secondary cell wall formation and lignin biosynthesis. Goicoechea Monica, Lacombe Eric, Legay Sylvain, Mihaljevic Snjezana, Rech Philippe, Jauneau Alain, Lapierre Catherine, Pollet Brigitte, Verhaegen Daniel, Chaubet-Gigot Nicole, Grima Pettenati Jacqueline. 2005. Plant Journal, 43 (4) : 553-567.

Transcription and somatic transposition of the maise En/Spm transposon system in rice. Greco Rafaella, Ouwerkerk Pieter B.F., Taal A.J.C., Sallaud Christophe, Guiderdoni Emmanuel, Meijer Annemarie H., Hoge J.H.C., Pereira Andy. 2004. Molecular Genetics and Genomics, 270 (6) : 514-523.

Exploring the transcriptome of roots and ectomycorrhizal symbionts. Kohler Annegret, Duplessis Sébastien, Tagu Denis, Encelot Nathalie, Delaruelle Christine, Martin Francis. 2002. In : Journées Jean Chevaugeon : IVe rencontres de phytopathologie - mycologie du 13 au 17 mars 2002. [Résumés]. CIRAD-MIDEC, INRA, CNRS, SFP. Montpellier : CIRAD, Résumé, 1 p. Journées Jean Chevaugeon, Rencontres de phytopathologie-mycologie. 4, Aussois, France, 13 Mars 2002/17 Mars 2002.

Molecular and physiological responses to water deficit in drought-tolerant and drought-sensitive lines of sunflower. Accumulation of dehydrin transcripts correlates with tolerance. Cellier Françoise, Conejero Geneviève, Breitler Jean-Christophe, Casse Francine. 1998. Plant Physiology, 116 : 319-328.