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Genetic diversity of native and cultivated Ugandan Robusta coffee (Coffea canephora Pierre ex A. Froehner): Climate influences, breeding potential and diversity conservation. Kiwuka Catherine, Goudsmit Eva, Tournebize Rémi, Oliveira de Aquino Sinara, Douma Jacob C., Bellanger Laurence, Crouzillat Dominique, Stoffelen Piet, Sumirat Ucu, Legnaté Hyacinthe, Marraccini Pierre, De Kochko Alexandre, Carvalho Andrade Alan, Wasswa Mulumba John, Musoli Pascal, Anten Niels P.R., Poncet Valérie. 2021. PloS One, 16 (2):e0245965, 19 p.

Identification and characterization of Vietnamese coffee bacterial endophytes displaying in vitro antifungal and nematicidal activities. Duong Benoit, Nguyen Xuan Hoa, Phan Viet Ha, Colella Stefano, Trinh Quang Phap, Hoang Thi Giang, Nguyen Thi Tuyet, Marraccini Pierre, Lebrun Michel, Duponnois Robin. 2021. Microbiological Research, 242:126613, 13 p.

Coffee microbiota and its potential use in sustainable crop management. A review. Duong Benoit, Marraccini Pierre, Maeght Jean-Luc, Vaast Philippe, Lebrun Michel, Duponnois Robin. 2020. Frontiers in Sustainable Food Systems, 4:607935, 31 p.

Flavor precursors and sensory attributes of coffee submitted to different post-harvest processing. Good Kitzberger Cíntia Sorane, Pot David, Marraccini Pierre, Protasio Pereira Luiz Filipe, Dos Santos Scholz Maria Brigida. 2020. AIMS Agriculture and Food, 5 (4) : 700-714.

Expression of DREB-like genes in Coffea canephora and C. arabica subjected to various types of abiotic stress. Ferreira Torres Luana, Reichel Tharyn, Dechamp Eveline, De Aquino Oliveira Sinara, Duarte Karoline Estefani, Costa Alves Gabriel Sergio, Tadeu Silva Anderson, Guitton Cotta Michelle, Santos Costa Tatiana, Cardamone Diniz Leandro Eugenio, Breitler Jean-Christophe, Collin Myriam, Vilela Paiva Luciano, Carvalho Andrade Alan, Etienne Hervé, Marraccini Pierre. 2019. Tropical Plant Biology, 12 (2) : 98-116.

Identification and characterization of core abscisic acid (ABA) signaling components and their gene expression profile in response to abiotic stresses in Setaria viridis. Duarte Karoline Estefani, de Souza Wagner Rodrigo, Ribeiro Santiago Thaís, Leite Sampaio Bruno, Ribeiro Ana Paula, Guitton Cotta Michelle, Andrade Dias Brito da Cunha Bárbara, Marraccini Pierre, Kobayashi Adilson Kenji, Molinari Hugo Bruno Correa. 2019. Scientific Reports, 9:4028, 16 p.

Starmaya: The first arabica F1 coffee hybrid produced using genetic male sterility. Georget Frederic, Marie Lison, Alpizar Edgardo, Courtel Philippe, Bordeaux Mélanie, Hidalgo Martin, Marraccini Pierre, Breitler Jean-Christophe, Dechamp Eveline, Poncon Clément, Etienne Hervé, Bertrand Benoît. 2019. Frontiers in Plant Science, 10:1344, 13 p.

CRISPR/Cas9-mediated efficient targeted mutagenesis has the potential to accelerate the domestication of Coffea canephora. Breitler Jean-Christophe, Dechamp Eveline, Campa Claudine, Rodrigues Leonardo Augusto Zebral, Guyot Romain, Marraccini Pierre, Etienne Hervé. 2018. Plant Cell, Tissue and Organ Culture, 134 (3) : 383-394.

Coffee somatic embryogenesis: How did research, experience gained and innovations promote the commercial propagation of elite clones from the two cultivated species. Etienne Hervé, Breton David, Breitler Jean-Christophe, Bertrand Benoît, Dechamp Eveline, Awada Rayan, Marraccini Pierre, Leran Sophie, Alpizar Edgardo, Campa Claudine, Courtel Philippe, Georget Frederic, Ducos Jean-Paul. 2018. Frontiers in Plant Science, 9:1630, 21p.

Gene expression in coffee. Marraccini Pierre. 2020. In : Progress in botany. Cánovas F.M. (ed.), Lüttge U. (ed.), Risueño MC. (ed.), Pretzsch H. (ed.). Cham : Springer, 43-111. (Progress in Botany, 82) ISBN 978-3-030-68619-2

New varieties for innovative agroforestry coffee systems. Bertrand Benoît, Breitler Jean-Christophe, Georget Frederic, Penot Eric, Bordeaux Mélanie, Marraccini Pierre, Leran Sophie, Campa Claudine, Bonato Olivier, Villain Luc, Etienne Hervé. 2019. In : The agroecological transition of agricultural systems in the Global South. Côte François-Xavier (ed.), Poirier-Magona Emmanuelle (ed.), Perret Sylvain (ed.), Roudier Philippe (ed.), Bruno Rapidel (ed.), Thirion Marie-Cécile (ed.). Versailles : Ed. Quae, 161-176. (Agricultures et défis du monde) ISBN 978-2-7592-3056-3

De nouvelles variétés pour des systèmes caféiers agroforestiers innovants. Bertrand Benoît, Breitler Jean-Christophe, Georget Frederic, Penot Eric, Bordeaux Mélanie, Marraccini Pierre, Leran Sophie, Campa Claudine, Bonato Olivier, Villain Luc, Etienne Hervé. 2018. In : La transition agro-écologique des agricultures du Sud. Côte François-Xavier (ed.), Poirier-Magona Emmanuelle (ed.), Perret Sylvain (ed.), Roudier Philippe (ed.), Bruno Rapidel (ed.), Thirion Marie-Cécile (ed.). Versailles : Ed. Quae, 231-256. (Agricultures et défis du monde) ISBN 978-2-7592-2824-9

Patterns of adaptive genetic variation across Coffea canephora. Poncet Valérie, Tournebize Rémi, Aquino Sinara O., Marraccini Pierre, Mariac Cédric, Bethune Kevin, Andrade Alan Carvalho, Kiwuka Catherine, Crouzillat Dominique, Anten Niels P.R., Manel Stéphanie, De Kochko Alexandre. 2019. In : 27th Biennial ASIC Conference, Portland, 16-20 September 2018. Book of abstracts 2019. ASIC, SCA. Portland : ASIC, Résumé, 1 p. Biennial ASIC Conference. 27, Portland, États-Unis, 16 Septembre 2018/20 Septembre 2018.

Creating new coffee varieties to cope with climate changes: current knowledge and future challenges. Marraccini Pierre, De Aquino Oliveira Sinara, Torres Luana F., Alves G.C.S., Breitler Jean-Christophe, Campa Claudine, Leran Sophie, Villain Luc, Georget Frederic, De Kochko Alexandre, Poncet Valérie, Andrade Alan Carvalho, Etienne Hervé, Bertrand Benoît. 2018. In : Abstracts of 12th IPMB2018. Agropolis Fondation, MUSE, l'INRA, le CNRS, Montpellier SupAgro, l'Université de Montpellier, l'IRD, CIRAD, la SFBV, le Labex Tulip, la SPS, Molecular Plant, The Plant Cell, Communications Biology, la Région Occitanie - Pyrénées/Méditerranée. Montpellier : IPMB, 2 p. Congress of the International Plant Molecular Biology ( IPMB2018). 12, Montpellier, France, 5 Août 2018/10 Août 2018.

CRISPR/Cas9-mediated efficient targeted mutagenesis has the potential to accelerate the domestication of Coffea canephora. Breitler Jean-Christophe, Dechamp Eveline, Campa Claudine, Rodrigues Leonardo Augusto Zebral, Guyot Romain, Marraccini Pierre, Etienne Hervé. 2019. In : 27th Biennial ASIC Conference, Portland, 16-20 September 2018. Book of abstracts 2019. ASIC, SCA. Portland : ASIC, Résumé, 1 p. Biennial ASIC Conference. 27, Portland, États-Unis, 16 Septembre 2018/20 Septembre 2018.

Coffee somatic embryogenesis, a model to decipher fundamental mechanisms associated to totipotency, somaclonal variation and photo-autotrophy acquisition. Etienne Hervé, Breitler Jean-Christophe, Bertrand Benoît, Dechamp Eveline, Marraccini Pierre, Leran Sophie, Campa Claudine, Duangsodsri Teerarat, Georget Frederic, Awada Rayan. 2019. In : 27th Biennial ASIC Conference, Portland, 16-20 September 2018. Book of abstracts 2019. ASIC, SCA. Portland : ASIC, Résumé, 1 p. Biennial ASIC Conference. 27, Portland, États-Unis, 16 Septembre 2018/20 Septembre 2018.

Comportamento estomático de Coffea canephora em condições de cerrado. Sampaio de Matos Nagla Maria, Pereira Fernanda Aparecida Castro, Mendes Antônio Nazareno Guimarães, Carvalho Milene Alves de Figueiredo, Rodrigues Gustavo Costa, Veiga Adriano Delly, Marraccini Pierre, Bartholo Gabriel Ferreira. 2019. In : X Simpósio de Pesquisa dos Cafés do Brasil. Consórcio Pesquisa Café. Vitória : EMBRAPA, 4 p. (Anais do Simpósio de Pesquisa dos Cafés do Brasil, 10) Simpósio de Pesquisa dos Cafés do Brasil. 10, Vitória, Brésil, 8 Octobre 2019/11 Octobre 2019.

Desenvolvimento e validação de uma plataforma de genotipagem em larga escala para Coffea canephora. De Araújo Carneiro Fernanda, De Aquino Sinara Oliveira, Gomes Mattos Nathália, Coelho Valeriano Jéssica, de Jesus Carneiro Wendel William, Marraccini Pierre, Bonfim da Silva Júnior Orzenil, Grattapaglia Dario, Carvalho Andrade Alan. 2019. In : X Simpósio de Pesquisa dos Cafés do Brasil. Consórcio Pesquisa Café. Vitória : EMBRAPA, 4 p. (Anais do Simpósio de Pesquisa dos Cafés do Brasil, 10) Simpósio de Pesquisa dos Cafés do Brasil. 10, Vitória, Brésil, 8 Octobre 2019/11 Octobre 2019.

Estudo de associação genômica ampla para importantes características agronômicas em Coffea canephora. De Araújo Carneiro Fernanda, De Aquino Sinara Oliveira, Gomes Mattos Nathália, Coelho Valeriano Jéssica, de Jesus Carneiro Wendel William, Costa Rodrigues Gustavo, Alves de Figueiredo Carvalho Milene, Veiga Adriano Delly, Grattapaglia Dario, Bonfim da Silva Júnior Orzenil, Marraccini Pierre, Cunha Vieira Junior Indalecio, Balestre Márcio, Carvalho Andrade Alan. 2019. In : X Simpósio de Pesquisa dos Cafés do Brasil. Consórcio Pesquisa Café. Vitória : EMBRAPA, 5 p. (Anais do Simpósio de Pesquisa dos Cafés do Brasil, 10) Simpósio de Pesquisa dos Cafés do Brasil. 10, Vitória, Brésil, 8 Octobre 2019/11 Octobre 2019.

Genotipagem por enriquecimento e captura direcionada de genes candidatos em Coffea canephora. De Aquino Sinara Oliveira, Tournebize Rémi, Marraccini Pierre, Mariac Cédric, Couderc Marie, Bethune Kevin, Cubry Philippe, Andrade Alan Carvalho, Darracq Olivier, Lepelley Maud, Crouzillat Dominique, Kiwuka Catherine, Anten Niels P.R., Manel Stéphanie, François Olivier, Vigouroux Yves, De Kochko Alexandre, Poncet Valérie. 2019. In : X Simpósio de Pesquisa dos Cafés do Brasil. Consórcio Pesquisa Café. Vitória : EMBRAPA, 6 p. (Anais do Simpósio de Pesquisa dos Cafés do Brasil, 10) Simpósio de Pesquisa dos Cafés do Brasil. 10, Vitória, Brésil, 8 Octobre 2019/11 Octobre 2019.

Potencial adaptativo de Coffea canephora para projeções das alterações climáticas. De Aquino Sinara Oliveira, Tournebize Rémi, Marraccini Pierre, Mariac Cédric, Couderc Florence, Bethune Kevin, Cubry Philippe, Andrade Alan Carvalho, Darracq Olivier, Lepelley Maud, Crouzillat Dominique, Kiwuka Catherine, Anten Niels P.R., Manel Stéphanie, François Olivier, Vigouroux Yves, De Kochko Alexandre, Poncet Valérie. 2019. In : X Simpósio de Pesquisa dos Cafés do Brasil. Consórcio Pesquisa Café. Vitória : EMBRAPA, 6 p. (Anais do Simpósio de Pesquisa dos Cafés do Brasil, 10) Simpósio de Pesquisa dos Cafés do Brasil. 10, Vitória, Brésil, 8 Octobre 2019/11 Octobre 2019.

Potencial hídrico e condutância estomática de Coffea canephora em condições de cerrado. Santos Meline de Oliveira, Brandão Isabel Rodrigues, Carvalho Milene Alves de Figueiredo, Rodrigues Gustavo Costa, Veiga Adriano Delly, Marraccini Pierre, Bartholo Gabriel Ferreira. 2019. In : X Simpósio de Pesquisa dos Cafés do Brasil. Consórcio Pesquisa Café. Vitória : EMBRAPA, 4 p. (Anais do Simpósio de Pesquisa dos Cafés do Brasil, 10) Simpósio de Pesquisa dos Cafés do Brasil. 10, Vitória, Brésil, 8 Octobre 2019/11 Octobre 2019.

RNA-seq em Coffea arabica: genes candidatos em condições de estresse abiótico. Ferreira Torres Luana, Dechamp Eveline, Costa Alves Gabriel Sergio, Marraccini Pierre, Etienne Hervé, Carvalho Andrade Alan. 2019. In : X Simpósio de Pesquisa dos Cafés do Brasil. Consórcio Pesquisa Café. Vitória : EMBRAPA, 6 p. (Anais do Simpósio de Pesquisa dos Cafés do Brasil, 10) Simpósio de Pesquisa dos Cafés do Brasil. 10, Vitória, Brésil, 8 Octobre 2019/11 Octobre 2019.

Seleção genômica ampla no melhoramento de Coffea canephora. De Araújo Carneiro Fernanda, De Aquino Oliveira Sinara, Gomes Mattos Nathália, Coelho Valeriano Jéssica, de Jesus Carneiro Wendel William, Costa Rodrigues Gustavo, Alves de Figueiredo Carvalho Milene, Veiga Adriano Delly, Grattapaglia Dario, Bonfim da Silva Júnior Orzenil, Marraccini Pierre, Cunha Vieira Junior Indalecio, Balestre Márcio, Carvalho Andrade Alan. 2019. In : X Simpósio de Pesquisa dos Cafés do Brasil. Consórcio Pesquisa Café. Vitória : EMBRAPA, 6 p. (Anais do Simpósio de Pesquisa dos Cafés do Brasil) Simpósio de Pesquisa dos Cafés do Brasil. 10, Vitória, Brésil, 8 Octobre 2019/11 Octobre 2019.

Validação de método voltamétrico para a determinação de cobre em café utilizando eletrodo de ouro modificado com peptídeo. Magarelli Gabriella, Da Silva Jonatas G., Rodrigues M.A., De Souza Jurandir R., Marraccini Pierre, De Castro Clarissa S.P., Bemquerer Marcelo P.. 2017. In : Rede de Nanotecnologia Aplicada ao Agronegócio Anais do IX Workshop 2017. Caue Ribeiro (ed.), Elaine Cristina Paris (ed.), Luiz Henrique Capparelli Mattoso (ed.), Marcelo Porto Bemquerer (ed.), Maria Alice Martins (ed.), Odílio Benedito Garrido de Assis (ed.). São Carlos : EMBRAPA, 110-113. (Embrapa Instrumentação) Workshop de Nanotecnologia Aplicada ao Agronegócio. 9, São Carlos, Brésil, 21 Novembre 2017/22 Novembre 2017.

BREEDCAFS (Breeding Coffee for Agroforestry Systems) project in Vietnam. Marraccini Pierre, Vaast Philippe, Nguyen Thi Thanh Hai, Nguyen Thi Quynh Chang, Vu Hong Trang, Nguyen Quang Trung, nguyen Thi Van, Nguyen Thanh Duc, Do Nang Vinh, Georget Frederic, Pruvot-Woehl Solène, Luu Ngoc Quyen, Skovmand Bosselmann Aske, Etienne Hervé, Bertrand Bertrand. 2019. In : 4th World Congress on Agroforestry. Book of abstracts. Dupraz Christian (ed.), Gosme Marie (ed.), Lawson Gerry (ed.). CIRAD, INRA, World Agroforestry, Agropolis International, MUSE. Montpellier : CIRAD-INRA, Résumé, p. 624. World Congress on Agroforestry. 4, Montpellier, France, 20 Mai 2019/22 Mai 2019.

Patterns of adaptive genetic variation across Coffea canephora. Poncet Valérie, Tournebize Rémi, Aquino Sinara O., Marraccini Pierre, Mariac Cédric, Bethune Kevin, Andrade Alan A., Kiwuka Catherine, Crouzillat Dominique, Anten Niels P.R., Manel Stéphanie, De Kochko Alexandre. 2018. . Montpellier : ESEB, Résumé, 1 p. Joint Congress on Evolutionary Biology, Montpellier, France, 19 Août 2018/22 Août 2018.

Targeted capture of dreb subfamily genes as candidates genes for drought tolerance polymorphism in natural population of coffea canephora. [P1185]. Aquino Sinara O., Marraccini Pierre, Mariac Cédric, Couderc Marie, Bethune Kevin, Andrade Alan Carvalho, Darracq Olivier, Lepelley Maud, Vigouroux Yves, Kiwuka Catherine, Anten Niels P.R., De Kochko Alexandre, Poncet Valérie. 2018. In : Proceedings Plant and Animal Genome XXVI Conference. PAG. San Diego : PAG, Résumé, 1 p. Plant and Animal Genomes Conference. 26, San Diego, États-Unis, 13 Janvier 2018/17 Janvier 2018.