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Nombre de documents : 233.

Article de revue

Chemical control against coffee berry disease: The efficacy of fungicides and berry position on disease incidence. Kacko Agripine, Mouen Bedimo Joseph Aubert, Ribeyre Fabienne, Cilas Christian, Niemenak Nicolas. 2024. Journal of Plant Diseases and Protection, 131 : 533-544.
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Complete sequence and genome characterization of miscanthus virus M, a new betaflexivirus from Miscanthus sp. Abrahamian Peter, Grinstead Samuel, Kinard Gary, Goenaga Ricardo, Rott Philippe, Mollov Dimitre S.. 2024. Archives of Virology, 169:27, 5 p.
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Disentangling shade effects for cacao pest and disease regulation in the Peruvian Amazonia. Ramos Marcos Javier, Bagny-Beilhe Leïla, Alvarado Jhoner, Rapidel Bruno, Allinne Clémentine. 2024. Agronomy for Sustainable Development, 44:11, 17 p.
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Pheromone traps and climate variations influence populations of Sahlbergella singularis (Hemiptera: Miridae) and associated damage of cocoa in Cameroon. Mahot Hermine Claudine, Bagny-Beilhe Leïla, Mahob Raymond, Begoudé Aimé-Didier B., Fotso Kuate Apollin, Membang Gertrude, Ewane Nathalie, Kemga Adolph, Bilong Charles F.B., Hall David R., Fiaboe Komi K. Mokpokpo, Hanna Rachid. 2024. Environmental Entomology:nvad117, 11 p.
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Understanding the joint evolution of dispersal and host specialisation using phytophagous arthropods as a model group. Ravigné Virginie, Rodrigues Leonor R., Charlery De La Masseliere Maud, Facon Benoît, Kuczyński Lechosław, Radwan Jacek, Skoracka Anna, Magalhães Sara. 2024. Biological Reviews - Cambridge Philosophical Society, 99 : 219-237.
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Unveiling the predominance of Saccharum spontaneum alleles for resistance to orange rust in sugarcane using genome-wide association. Dijoux Jordan, Rio Simon, Hervouet Catherine, Garsmeur Olivier, Barau Laurent, Dumont Thomas, Rott Philippe, D'Hont Angélique, Hoarau Jean-Yves. 2024. Theoretical and Applied Genetics, 137:81, 17 p.
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The bZIP transcription factor BIP1 of the rice blast fungus is essential for infection and regulates a specific set of appressorium genes. Lambou Karine, Tag Andrew, Lassagne Alexandre, Collemare Jérôme, Clergeot Pierre-Henri, Barbisan Crystel, Perret Phillippe, Tharreau Didier, Millazo Joelle, Chartier Elia, De Vries Ronald P., Hirsch Judith, Morel Jean-Benoit, Beffa Roland, Kroj Thomas, Thomas Terry, Lebrun Marc-Henri. 2024. PLoS Pathogens, 20 (1):e1011945, 30 p.
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African army ants at the forefront of virome surveillance in a remote tropical forest. Fritz Matthieu, Reggiardo Bérénice, Filloux Denis, Claude Lisa, Fernandez Emmanuel, Mahe Frédéric, Kraberger Simona, Custer Joy M., Becquart Pierre, Mebaley Telsta Ndong, Kombila Linda Bohou, Lenguiya Léadisaelle H., Boundenga Larson, Mombo Illich M., Maganga Gaël Darren, Niama Fabien R., Koumba Jean-Sylvain, Ogliastro Mylène, Yvon Michel, Martin Darren Patrick, Blanc Stéphane, Varsani Arvind, Leroy Eric M., Roumagnac Philippe. 2023. Peer Community Journal, 3:e24, 21 p.
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Agroecological crop protection for sustainable agriculture. Deguine Jean-Philippe, Aubertot Jean-Noël, Bellon Stéphane, Côte François-Xavier, Lauri Pierre-Eric, Lescourret Françoise, Ratnadass Alain, Scopel Eric, Andrieu Nadine, Barberi Paolo, Becker Nathalie, Bouyer Jérémy, Brévault Thierry, Cerdan Claire, Cortesero Anne-Marie, Dangles Olivier, Delatte Hélène, Yen Dinh Phuong Thi, Dreyer Hans, Duru Michel, Flor Rica Joy, Gardarin Antoine, Husson Olivier, Jacquot Maxime, Javelle Aurélie, Justes Eric, Xuan Lam Mai Thi, Launay Marie, Van Le Vang, Longis Sandrine, Martin José, Munier-Jolain Nicolas, Thu Nguyen Nga Thi, Ngoc Nguyen Truc Thi, Penvern Servane, Petit Sandrine, Poisot Anne-Sophie, Robin Marie-Hélène, Rolland Bernard, Rusch Adrien, Sabourin Eric, Sanguin Hervé, Sarthou Jean-Pierre, Sester Mathilde, Simon Sylvaine, Sourisseau Jean-Michel, Steinberg Christian, Tchamitchian Marc, Thoumazeau Alexis, Tibi Anaïs, Tivet Florent, Tixier Philippe, Trinh Xuan Thi, Vialatte Aude, Wyckhuys Kris, Lamichhane Jay Ram. 2023. Advances in Agronomy, 178 : 1-59.
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Benchmarking of virome metagenomic analysis approaches using a large, 60+ members, viral synthetic community. Schönegger Deborah, Moubset Oumaima, Margaria Paolo, Menzel Wulf, Winter Stephan, Roumagnac Philippe, Marais Armelle, Candresse Thierry. 2023. Journal of Virology, 97 (11), 20 p.
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CRISPRi in Xanthomonas demonstrates functional convergence of transcription activator-like effectors in two divergent pathogens. Zárate-Chaves Carlos Andrés, Audran Corinne, Medina Culma César Augusto, Escalon Aline, Javegny Stéphanie, Gagnevin Lionel, Thomas Emilie, Pimparé Léa-Lou, López Camilo, Jacobs Jonathan M., Noel Laurent D., Koebnik Ralf, Bernal Adriana Jimena, Szurek Boris. 2023. New Phytologist, 238 (4) : 1593-1604.
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Cannabis virome reconstruction and antiviral RNAi characterization through small RNA sequencing. Miotti Niccolo, Sukhikh Natalia, Laboureau Nathalie, Casati Paola, Pooggin Mikhail. 2023. Plants, 12 (23), n.spéc. Different Aspects of Plant Viral Metagenomics:3925, 12 p.
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Coupling plant growth models and pest and disease models: An interaction structure proposal, MIMIC. Triki Houssem, Ribeyre Fabienne, Pinard Fabrice, Jaeger Marc. 2023. Plant Phenomics, 5:0077, 15 p.
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Cut off behavior of Spodoptera frugiperda (Smith, 1797) (Lepidoptera: Noctuidae) in Soybean (Glycine max (L.) Merrill) seedlings. de Araújo Waldenio Antonio, Degrande Paulo Eduardo, Malaquias José Bruno, Silvie Pierre, Nascimento Scoton Ana Maria, da Silva Pachú Jéssica Karina. 2023. Brazilian Archives of Biology and Technology, 66:e23220386, 8 p.
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Deadly and venomous Lonomia caterpillars are more than the two usual suspects. González Camila, Ballesteros-Mejia Liliana, Díaz-Díaz Juana, Toro-Vargas Diana M., Amarillo-Suarez Angela R., Gey Delphine, Léon Cielo, Tovar Eduardo, Arias Monica, Rivera Nazario, Buitrago Luz Stella, Pinto-Moraes Roberto H., Sano Martins Ida S., Decaëns Thibaud, González Mailyn A., Kitching Ian J., Rougerie Rodolphe. 2023. PLoS Neglected Tropical Diseases, 17 (2):e0011063, 20 p.
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Effects of orange rust on sugarcane yield traits in a multi-environment breeding program. Dijoux Jordan, Dumont Thomas, Paysan Maureen, Legrand Charline, Hervouet Catherine, Barau Laurent, Rott Philippe, Hoarau Jean-Yves. 2023. Euphytica, 219:49, 22 p.
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Evolution of the rice blast pathogen on spatially structured rice landraces maintains multiple generalist fungal lineages. Ali Sajid, Gladieux Pierre, Ravel Sébastien, Adreit Henri, Meusnier Isabelle, Milazzo Joëlle, Cros-Arteil Sandrine, Bonnot François, Jin Baihui, Dumartinet Thomas, Charriat Florian, Lassagne Alexandre, He Xiahong, Tharreau Didier, Huang Huichuan, Morel Jean-Benoit, Fournier Elisabeth. 2023. Molecular Ecology, 32 (10), n.spéc. Evolutionary ecology of human associated microbes : 2519-2533.
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Genetic and morphological variants of Acidovorax avenae subsp. avenae cause red stripe of sugarcane in China. Zhao Jian-Ying, Chen Juan, Hu Zhong-Ting, Li Juan, Fu Hua-Ying, Rott Philippe, Gao San-Ji. 2023. Frontiers in Plant Science, 14:1127928, 11 p.
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Genetic diversity, evolution, and diagnosis of sugarcane yellow leaf virus from 19 sugarcane-producing locations worldwide. Rott Philippe, Grinstead Samuel, Dallot Sylvie, Foster Zachary S. L., Daugrois Jean-Heinrich, Fernandez Emmanuel, Kaye Claudia, Hendrickson Leticia, Hu Xiaojun, Adhikari Bishwo, Malapi Martha, Grunwald Niklaus J., Roumagnac Philippe, Mollov Dimitre S.. 2023. Plant Disease, 10711 : 3437-3447.
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Genetic structure and TALome analysis highlight a high level of diversity in burkinabe Xanthomonas Oryzae pv. oryzae populations. Diallo A., Wonni Issa, Sicard Anne, Blondin Laurence, Gagnevin Lionel, Vernière Christèle, Szurek Boris, Hutin Mathilde. 2023. Rice, 16:33, 14 p.
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Herbarium specimen sequencing allows precise dating of Xanthomonas citri pv. citri diversification history. Campos Paola, Pruvost Olivier, Boyer Karine, Chiroleu Frédéric, Cao Thuy Trang, Gaudeul Myriam, Baider Claudia, Utteridge Timothy M. A., Becker Nathalie, Rieux Adrien, Gagnevin Lionel. 2023. Nature Communications, 14:4306, 13 p.
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Immunological, molecular, and pathogenic characterization of sugarcane streak mosaic virus isolates from six asian countries. Rott Philippe, Chatenet Michèle, Mazarin Candy, Fernandez Emmanuel, Gargani Daniel, Royer Monique, Rao Govind P., Lockhart Benham E.L., Girard Jean-Claude. 2023. Sugar Tech, 25 : 1134-1143.
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In vitro and molecular docking evaluation of larvicidal effects of essential oils of five aromatic plants on the fall armyworm Spodoptera frugiperda JE Smith (Lepidoptera:Noctuidae) from Ivory Coast. Kobenan Koffi Christophe, Kouadio Ibrahime Sinan, Kouakou Malanno, Silvie Pierre, Bini Kouadio Kra Norbert, N'Goran Kouadio Emmanuel, Kouakou Brou Julien, Amangoua Nogbou Ferdinand, Tehia Kouakou Etienne, Uba Abdullahi Ibrahim, Zengin Gokhan. 2023. Chemistry and Biodiversity, 20 (8):e202300411, 14 p.
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Interpreting phylogenetic placements for taxonomic assignment of environmental DNA. Ewers Isabelle, Rajter Lubomir, Czech Lucas, Mahe Frédéric, Stamatakis Alexandros, Dunthorn Micah. 2023. Journal of Eukaryotic Microbiology, 70 (5):12990, 10 p.
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Leaf functional traits and pathogens: Linking coffee leaf rust with intraspecific trait variation in diversified agroecosystems. Gagliardi Stephanie, Avelino Jacques, Martin Adam R., Cadotte Marc W., de Melo Virginio Filho Elias, Isaac Marney E.. 2023. PloS One, 18 (4):e0284203, 16 p.
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Long-term anthropogenic management and associated loss of plant diversity deeply impact virome richness and composition of Poaceae communities. Maclot François, Debue Virginie, Malmstrom Carolyn M., Filloux Denis, Roumagnac Philippe, Eck Mathilde, Tamisier Lucie, Blouin Arnaud G., Candresse Thierry, Massart Sébastien. 2023. Microbiology Spectrum, 11 (2), 17 p.
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Marker-assisted pyramiding of blast-resistance genes in a japonica elite rice cultivar through forward and background selection. Zampieri Elisa, Volante Andrea, Maré Caterina, Orasen Gabriele, Desiderio Francesca, Biselli Chiara, Canella Marco, Carmagnola Lorena, Milazzo Joëlle, Adreit Henri, Tharreau Didier, Poncelet Nicolas, Vaccino Patrizia, Valè Giampiero. 2023. Plants, 12 (4), n.spéc. Advances in Genetics and Breeding of Grain Crops:757, 17 p.
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Metagenomics reveals the structure of Mastrevirus-host interaction network within an agro-ecosystem. Claverie Sohini, Hoareau Marie Murielle, Ben Chehida Sélim, Filloux Denis, Varsani Arvind, Roumagnac Philippe, Martin Darren Patrick, Lett Jean-Michel, Lefeuvre Pierre. 2023. Virus Evolution, 9 (2):vead043, 15 p.
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Molecular diversity of yam virus Y and identification of banana mild mosaic virus isolates infecting yam (Dioscorea spp.). Diouf Mame Boucar, Guyader Sébastien, Nopoly Marie-Michelle, Gaspard Olyvia, Filloux Denis, Candresse Thierry, Marais Armelle, Teycheney Pierre-Yves, Umber Marie. 2023. Archives of Virology, 168:180, 8 p.
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Newly described and already endangered: A new mammal species endemic to Corsica. Puechmaille Sébastien J., Dool Serena, Beuneux Gregory, Ruedi Manuel. 2023. Revue Suisse de Zoologie, 130 (2) : 335-351.
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No evidence of foliar disease impact on crop root functional strategies and soil microbial communities: what does this mean for organic coffee? Gagliardi Stephanie, Avelino Jacques, Fulthorpe Roberta, de Melo Virginio Filho Elias, Isaac Marney E.. 2023. Oikos, 2023 (1):e08987, 12 p.
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Pan-Arctic plankton community structure and its global connectivity. Ibarbalz Federico M., Henry Nicolas, Mahe Frédéric, Ardyna Mathieu, Zingone Adriana, Scalco Eleonora, Lovejoy Thomas E., Lombard Fabien, Jaillon Olivier, Iudicone Daniele, Malviya Shruti, Sullivan Matthew B., Chaffron Samuel, Karsenti Eric, Babin Marcel, Boss Emmanuel, Wincker Patrick, Zinger Lucie, de Vargas Colomban, Bowler Chris, Karp-Boss Lee. 2023. Elementa, 11 (1):00060, 17 p.
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Population structure of Pyricularia oryzae on rice in Vietnam reveals diversified populations with four pandemic and two endemic clusters. Le Lieu Thi, Adreit Henri, Ha Loan Thi, Milazzo Joëlle, Lebrun Michel, Tharreau Didier, Pham Xuan Hoi, Nguyen Hai Thy Thanh, Fournier Elisabeth, Hoang Giang Thi. 2023. Fungal Genetics and Biology, 166:103794, 10 p.
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Rank-based data synthesis of heterogeneous trials to identify the effects of climatic factors on the reaction of Musa genotypes to black leaf streak disease. Brown David, de Bruin Sytze, De Sousa Kauê, Abadie Catherine, Carpentier Sébastien Christian, Machida Lewis, Van Etten Jacob. 2023. Agronomy Journal, 115 (6) : 2990-3009.
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Refining the emergence scenario of the invasive recombinant Tomato yellow leaf curl virus -IS76. Jammes Margaux, Urbino Cica, Diouf Mame Boucar, Peterschmitt Michel. 2023. Virology, 578 : 71-80.
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Revisiting the historical scenario of a disease dissemination using genetic data and Approximate Bayesian Computation methodology: The case of Pseudocercospora fijiensis invasion in Africa. Gilabert Aude, Rieux Adrien, Robert Stéphanie, Vitalis Renaud, Zapater Marie-Françoise, Abadie Catherine, Carlier Jean, Ravigné Virginie. 2023. Ecology and Evolution, 13 (4):e10013, 17 p.
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Sugarcane mild mosaic virus: The rediscovery of an identified but unrecognized virus. Mollov Dimitre S., Filloux Denis, Grinstead Samuel, Bolus Stephen, Claude Lisa, Fernandez Emmanuel, Julian Charlotte, Candresse Thierry, Lockhart Benham E.L., Roumagnac Philippe, Rott Philippe, Daugrois Jean-Heinrich. 2023. Plant Pathology, 72 (2) : 312-321.
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Suspicions of two bridgehead invasions of Xylella fastidiosa subsp. multiplex in France. Dupas Enora, Durand Karine, Rieux Adrien, Briand Martial, Pruvost Olivier, Cunty Amandine, Denancé Nicolas, Donnadieu Cecile, Legendre Bruno, Lopez-Roques Céline, Cesbron Sophie, Ravigné Virginie, Jacques Marie Agnès. 2023. Communications Biology, 6:103, 13 p.
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Tree effects on coffee leaf rust at field and landscape scales. Avelino Jacques, Gagliardi Stephanie, Perfecto Ivette, Isaac Marney E., Liebig Theresa, Vandermeer John, Merle Isabelle, Hajian-Forooshani Zachary, Motisi Natacha. 2023. Plant Disease, 107 (2) : 247-261.
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Whole-genome sequences of Bipolaris bicolor, Curvularia hawaiiensis, Curvularia spicifera, and Exserohilum rostratum isolated from rice in Burkina Faso, France, Mali, and Pakistan. Kaboré Kouka Hilaire, Kassankogno Abalo Itolou, Adreit Henri, Ravel Sébastien, Charriat Florian, Diagne Diariatou, Lebrun Marc-Henri, Tharreau Didier. 2023. Mycology, 12 (11), 4 p.
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The genome of a bunyavirus cannot be defined at the level of the viral particle but only at the scale of the viral population. Yvon Michel, German Thomas L., Ullman Diane E., Dasgupta Ranjit, Parker Maxwell H., Ben-Mahmoud Sulley, Verdin Eric, Gognalons Patrick, Ancelin Aurélie, Laï Kee Him Joséphine, Girard Justine, Vernerey Marie-Stéphanie, Fernandez Emmanuel, Filloux Denis, Roumagnac Philippe, Bron Patrick, Michalakis Yannis, Blanc Stéphane. 2023. Proceedings of the National Academy of Sciences of the United States of America, 120 (48):e2309412120, 10 p.
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A global assessment of the state of plant health. Savary Serge (ed.), Global Plant Health Assessment Project (ed.), Avelino Jacques (ed.), et al. (ed.). 2023. Plant Disease, 107 : 3649-3665.
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A minisatellite-based MLVA for deciphering the global epidemiology of the bacterial cassava pathogen Xanthomonas phaseoli pv. manihotis. Rache Leidy, Blondin Laurence, Diaz Tatis Paula, Flores Carolina, Camargo Andrea, Kanté Moussa, Wonni Issa, López Camilo, Szurek Boris, Dupas Stéphane, Pruvost Olivier, Koebnik Ralf, Restrepo Silvia, Bernal Adriana Jimena, Vernière Christian. 2023. PloS One, 18 (5):e0285491, 16 p.
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A natural single nucleotide mutation in the small regulatory RNA ArcZ of Dickeya solani switches off the antimicrobial activities against yeast and bacteria. Brual Typhaine, Effantin Geraldine, Baltenneck Julie, Attaiech Laetitia, Grosbois Cloé, Royer Monique, Cigna Jérémy, Faure Denis, Hugouvieux-Cotte-Pattat Nicole, Gueguen Erwan. 2023. PLoS Genetics, 19 (4):e1010725, 23 p.
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A network approach to decipher the dynamics of Lysobacteraceae plasmid gene sharing. Richard Damien, Roumagnac Philippe, Pruvost Olivier, Lefeuvre Pierre. 2023. Molecular Ecology, 32 (10), n.spéc. Evolutionary ecology of human associated microbes : 2660-2673.
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Assessing the joint effects of landscape, farm features and crop management practices on berry damage in coffee plantations. Vilchez Mendoza Sergio José, Romero-Gurdián Ali, Avelino Jacques, DeClerck Fabrice, Bommel Pierre, Betbeder Julie, Cilas Christian, Bagny-Beilhe Leïla. 2022. Agriculture, Ecosystems and Environment, 330:107903
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Association mapping of colour variation in a butterfly provides evidence that a supergene locks together a cluster of adaptive loci. Jay Paul, Leroy Manon, Le Poul Yann, Whibley Annabel, Arias Monica, Chouteau Mathieu, Joron Mathieu. 2022. Philosophical Transactions - Royal Society. Biological Sciences, 377 (1856), dossier Genomic architecture of supergenes: causes and evolutionary consequences, 14 p.
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CRISPR/Cas9-Targeted knockout of rice susceptibility genes OsDjA2 and OsERF104 reveals alternative sources of resistance to Pyricularia oryzae. Tavora Fabiano T.P.K., Meunier Anne Cecile, Vernet Aurore, Portefaix Murielle, Milazzo Joëlle, Adreit Henri, Tharreau Didier, Franco Octávio L., Mehta Angela. 2022. Rice Science, 29 (6) : 535-544.
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Changes in intraspecific diversity of the arbuscular mycorrhizal community involved in plant-plant interactions between Sporobolus robustus Kunth and Prosopis juliflora (Swartz) DC along an environmental gradient. Fall Fatoumata, Sanguin Hervé, Fall Dioumacor, Tournier Estelle, Bakhoum Niokhor, Ndiaye Cheikh, Diouf Diégane, Bâ Amadou Moustapha. 2022. Microbial Ecology, 83 : 886-898.
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Complete genome sequence of a novel marafivirus infecting pearl millet in Burkina Faso. Palanga Essowé, Tibiri Ezechiel Bionimian, Bangratz Martine, Filloux Denis, Julian Charlotte, Pinel-Galzi Agnès, Koala Moustapha, Bouma Neya James, Brugidou Christophe, Tiendrebeogo Fidèle, Roumagnac Philippe, Hebrard Eugénie. 2022. Archives of Virology, 167 : 145-148.
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Complex adaptive architecture of quantitative resistance erosion in a plant fungal pathogen. Dumartinet Thomas, Ravel Sébastien, Roussel Véronique, Perez-Vicente Luis, Aguayo Jaime, Abadie Catherine, Carlier Jean. 2022. Molecular Ecology, 31 (4) : 1160-1179.
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CulebrONT: A streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes. Orjuela Castellanos Julie, Comte Aurore, Ravel Sébastien, Charriat Florian, Vi Tram, Sabot François, Cunnac Sébastien. 2022. Peer Community Journal, 2:e46, 9 p.
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Ecosystem-based practices for smallholders' adaptation to climate extremes: Evidence of benefits and knowledge gaps in Latin America. Vignola Raffaele, Jimena Esquivel Maria, Harvey Celia A., Rapidel Bruno, Bautista Solis Pavel, Alpizar Francisco, Donatti Camila I., Avelino Jacques. 2022. Agronomy (Basel), 12 (10), n.spéc. Climate-Smart Agriculture Practices for Reducing Production Risks for Smallholder Farmers:2535, 40 p.
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Editorial for the special issue "Microbial Nonribosomal Synthesis of Secondary Metabolites". Cociancich Stéphane, Leclère Valérie. 2022. Microorganisms, 10 (5), n.spéc. Microbial Non-Ribosomal Synthesis of Secondary Metabolites:1064, 4 p.
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EggLib 3: A python package for population genetics and genomics. Siol Mathieu, Coudoux Thomas, Ravel Sébastien, De Mita Stéphane. 2022. Molecular Ecology Resources, 22 (8) : 3176-3187.
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Emergent phases of ecological diversity and dynamics mapped in microcosms. Hu Jiliang, Amor Daniel R., Barbier Matthieu, Bunin Guy, Gore Jeff. 2022. Science, 378 (6615) : 85-89.
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Enrichment in biodiversity and maturation of the soil food web under conservation agriculture is associated with suppression of rice-parasitic nematodes. Masson Anne-Sophie, Vermeire Marie-Liesse, Leng Vira, Simonin Marie, Tivet Florent, Nguyen Thi Hue, Brunel Caroline, Suong Malyna, Kuok Fidero, Moulin Lionel, Bellafiore Stéphane. 2022. Agriculture, Ecosystems and Environment, 331:107913, 15 p.
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Establishment of five new genera in the family Geminiviridae: Citlodavirus, Maldovirus, Mulcrilevirus, Opunvirus, and Topilevirus. Roumagnac Philippe, Lett Jean-Michel, Fiallo-Olivé Elvira, Navas-Castillo Jesús, Zerbini F. Murilo, Martin Darren Patrick, Varsani Arvind. 2022. Archives of Virology, 167 : 695-710.
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Exploring the emergence and evolution of plant pathogenic microbes using historical and paleontological sources. Malmstrom Carolyn M., Martin Michael, Gagnevin Lionel. 2022. Annual Review of Phytopathology, 60 (1) : 187-209.
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First report of rice brown spot caused by Exserohilum rostratum in Mali. Kabore Kouka Hilaire, Diagne Diariatou, Milazzo Joëlle, Adreit Henri, Lebrun Marc-Henri, Tharreau Didier. 2022. Plant Disease, 106 (6) : p. 1747.
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Fruit fly phylogeny imprints bacterial gut microbiota. Ravigné Virginie, Becker Nathalie, Massol François, Guichoux Erwan, Boury Christophe, Mahe Frédéric, Facon Benoît. 2022. Evolutionary Applications, 15 (10), n.spéc. Evolution in Agricultural Systems : 1621-1638.
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Gene copy number variations at the within-host population level modulate gene expression in a multipartite virus. Gallet Romain, Di Mattia Jeremy, Ravel Sébastien, Zeddam Jean-Louis, Vitalis Renaud, Michalakis Yannis, Blanc Stéphane. 2022. Virus Evolution, 8 (2):veac058 : 1-11.
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Genetic diversity and structure of Bipolaris oryzae and Exserohilum rostratum populations causing brown spot of rice in Burkina Faso based on genotyping-by-sequencing. Kabore Kouka Hilaire, Kassankogno Abalo Itolou, Adreit Henri, Milazzo Joëlle, Guillou Sonia, Blondin Laurence, Chopin Laurie, Ravel Sébastien, Charriat Florian, Barro Mariam, Tollenaere Charlotte, Lebrun Marc-Henri, Tharreau Didier. 2022. Frontiers in Plant Science, 13:1022348, 15 p.
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Genome characterization and complete sequence of a new badnavirus from Pandanus amaryllifolius. Alvarez-Quinto Robert A., Grinstead Samuel, Rott Philippe, Mollow Dimitre. 2022. Archives of Virology, 167 : 1717-1720.
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Genome-wide footprints in the carob tree (Ceratonia siliqua) unveil a new domestication pattern of a fruit tree in the Mediterranean. Baumel Alex, Feliner Gonzalo Nieto, Médail Frédéric, La Malfa Stefano, Di Guardo Mario, Bou Dagher Kharrat Magda, Lakhal-Mirleau Fatima, Frelon Valentine, Ouahmane Lahcen, Diadema Katia, Sanguin Hervé, Viruel Juan. 2022. Molecular Ecology, 31 (15) : 4095-4111.
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Highlighting the positive aspects of being a PhD student. Bernery Camille, Lusardi Léo, Marino Clara, Philippe-Lesaffre Martin, Angulo Elena, Bonnaud Elsa, Guéry Loreleï, Manfrini Elena, Turbelin Anna, Albert Céline, Arbieu Ugo, Courchamp Franck. 2022. eLife, 11:e81075, 5 p.
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Host range and molecular variability of the sadwavirus dioscorea mosaic associated virus. Umber Marie, Filloux Denis, Svanella‑Dumas Laurence, Bonheur Lydiane, Acina Manbole Isabelle Nina, Gomez Rose-Marie, Faure Chantal, Anzala Fabiola, Pavis Claudie, Roumagnac Philippe, Marais Armelle, Theil Sébastien, Candresse Thierry, Teycheney Pierre-Yves. 2022. Archives of Virology, 167 : 917-922.
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Identification of a novel vitivirus from pineapple in Reunion Island. Massé Delphine, Filloux Denis, Candresse Thierry, Massart Sébastien, Marals Armelle, Verdin Eric, Cassam Nathalie, Fernandez Emmanuel, Roumagnac Philippe, Teycheney Pierre-Yves, Lefeuvre Pierre, Lett Jean-Michel. 2022. Archives of Virology, 167 : 2355-2357.
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Integrated management of Verticillium Wilt of cocoa. Bouchon Anne-Sophie, Ten Hoopen Gerben Martijn. 2022. Frontiers in Agronomy, 4:911969, 15 p.
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Invasions of ecological communities: Hints of impacts in the invader's growth rate. Arnoldi Jean-François, Barbier Matthieu, Kelly Ruth, Barabás György, Jackson Andrew. 2022. Methods in Ecology and Evolution, 13 (1) : 167-182.
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Maintenance of divergent lineages of the Rice Blast Fungus Pyricularia oryzae through niche separation, loss of sex and post-mating genetic incompatibilities. Thierry Maud, Charriat Florian, Milazzo Joëlle, Adreit Henri, Ravel Sébastien, Cros-Arteil Sandrine, Borron Sonia, Sella Violaine, Kroj Thomas, Loos Renaud, Fournier Elisabeth, Tharreau Didier, Gladieux Pierre. 2022. PLoS Pathogens, 18 (7):e1010687, 33 p.
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Male fertility in Pyricularia oryzae: Microconidia are spermatia. Lassagne Alexandre, Brun Sylvain, Malagnac Fabienne, Adreit Henri, Milazzo Joëlle, Fournier Elisabeth, Tharreau Didier. 2022. Environmental Microbiology, 24 (12) : 6365-6375.
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Microclimate estimation under different coffee-based agroforestry systems using full-sun weather data and shade tree characteristics. Merle Isabelle, Villarreyna Acuna Rogelio Antonio, Ribeyre Fabienne, Roupsard Olivier, Cilas Christian, Avelino Jacques. 2022. European Journal of Agronomy, 132:126396, 13 p.
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Misidentification of free school tunas in the AOTTP database: Issues to identify fish-attractive seamounts. Akia Sosthène, Perez Ilan, Guéry Loreleï, Gaertner Daniel. 2022. Fisheries Research, 251:106324, 7 p.
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Molecular characterization of Cordyline virus 1 isolates infecting yam (Dioscorea spp). Diouf Mame Boucar, Gaspard Olyvia, Marais Armelle, Filloux Denis, Gomez Rose-Marie, Faure Chantal, Roumagnac Philippe, Candresse Thierry, Theil Sébastien, Contreras Sandy, Teycheney Pierre-Yves, Umber Marie. 2022. Archives of Virology, 167 : 2275-2280.
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Multi-species hotspots detection using self-organizing maps: Simulation and application to purse seine tuna fisheries management. Stephan Pauline, Gaertner Daniel, Perez Ilan, Guéry Loreleï. 2022. Methods in Ecology and Evolution, 13 (12) : 2850-2864.
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Nonribosomal peptide synthesis definitely working out of the rules. Duban Matthieu, Cociancich Stéphane, Leclère Valérie. 2022. Microorganisms, 10 (3), n.spéc. Microbial Non-Ribosomal Synthesis of Secondary Metabolites:577, 19 p.
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Occurrence and density of the stink bug Antestiopsis thunbergii Gmelin 1790 (Heteroptera: Pentatomidae) and related egg-parasitoids in Burundi coffee agroecosystems. Mugishawimana Jean, Murungi Lucy Kananu, Ndihokubwayo Soter, Nibasumba Anaclet, Haran Julien, David Guillaume, Haran Julien, David Guillaume. 2022. International Journal of Tropical Insect Science, 42 (5) : 3465-3480.
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Plankton Planet: A frugal, cooperative measure of aquatic life at the planetary scale. de Vargas Colomban, Le Bescot Noan, Pollina Thibault, Henry Nicolas, Romac Sarah, Colin Sébastien, Haëntjens Nils, Carmichael Margaux, Berger Calixte, Le Guen David, Decelle Johan, Mahe Frédéric, Poulain Julie, Malpot Emmanuel, Beaumont Carole, Hardy Michel, Guiffant Damien, Probert Ian, Gruber David F., Allen Andrew E., Gorsky Gabriel, Follows Michael J., Pochon Xavier, Troublé Romain, Cael B.B., Lombard Fabien, Boss Emmanuel, Prakash Manu. 2022. Frontiers in Marine Science, 9:936972, 17 p.
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ScPR1 plays a positive role in the regulation of resistance to diverse stresses in sugarcane (Saccharum spp.) and Arabidopsis thaliana. Chu Na, Zhou Jing-Ru, Rott Philippe, Li Juan, Fu Hua-Ying, Huang Mei-Ting, Zhang Hui-Li, Gao San-Ji. 2022. Industrial Crops and Products, 180:114736, 12 p.
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Specificity and genetic polymorphism in the Vfm quorum sensing system of plant pathogenic bacteria of the genus Dickeya. Hugouvieux-Cotte-Pattat Nicole, Royer Monique, Gueguen Erwan, Le Guen Paul, Süssmuth Roderich, Reverchon Sylvie, Cociancich Stéphane. 2022. Environmental Microbiology, 24 (3), n.spéc. Pathogen and Antimicrobial Resistance Ecology : 1467-1483.
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Sugarcane breeding in Reunion: Challenges, achievements and future prospects. Dumont Thomas, Barau Laurent, Thong-Chane Audrey, Dijoux Jordan, Mellin Mathilde, Daugrois Jean-Heinrich, Hoarau Jean-Yves. 2022. Sugar Tech, 24 (1) : 181-192.
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Sugarcane responses to two strains of Xanthomonas albilineans differing in pathogenicity through a differential modulation of salicylic acid and reactive oxygen species. Zhao Jian-Ying, Chen Juan, Shi Yang, Fu Hua-Ying, Huang Mei-Ting, Rott Philippe, Gao San-Ji. 2022. Frontiers in Plant Science, 13:1087525, 14 p.
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Swarm v3: Towards tera-scale amplicon clustering. Mahe Frédéric, Czech Lucas, Stamatakis Alexandros, Quince Christopher, de Vargas Colomban, Dunthorn Micah, Rognes Torbjørn. 2022. Bioinformatics, 38 (1) : 267-269.
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Synergy between an emerging monopartite begomovirus and a DNA-B component. Ouattara Alassane, Tiendrebeogo Fidèle, Becker Nathalie, Urbino Cica, Thébaud Gaël, Hoareau Murielle, Allibert Agathe, Chiroleu Frédéric, Vernerey Marie-Stéphanie, Traoré Edgar Valentin, Barro Nicolas, Traoré Oumar, Lefeuvre Pierre, Lett Jean-Michel. 2022. Scientific Reports, 12:695, 11 p.
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Tag-shedding rates for tropical tuna species in the Atlantic Ocean estimated from double-tagging data. Gaertner Daniel, Guéry Loreleï, Goñi N., Amande J., Pascual Alayon P., N'Gom F., Pereira J., Addi E., Ailloud L., Beare D.. 2022. Fisheries Research, 248:106211, 9 p.
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Towards a microbiota-based understanding of sugarcane health. Sanguin Hervé, Sood Sushma, Tournier Estelle, Julian Charlotte, Fernandez Emmanuel, Mahe Frédéric, Filloux Denis, Daugrois Jean-Heinrich, Roumagnac Philippe, Rott Philippe. 2022. Sugar Journal (June), Résumé : 28-29. ASSCT 2022 Annual Meeting, Bonita Springs, États-Unis, 21 Juin 2022/23 Juin 2022.
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Transcriptomic analysis of the sugarcane orange rust pathogen Puccinia kuehnii. Cardenas Daniela E., Auer Lucas, Morin Emmanuelle, Carrillo-Tarazona Yisel, Sood Sushma, Huguet-Tapia Jose, Saunders Diane G.O., Duplessis Sébastien, Rott Philippe, Cano Liliana M.. 2022. Sugar Journal (June) : 33-34. ASSCT 2022 Annual Meeting, Bonita Springs, États-Unis, 21 Juin 2022/23 Juin 2022.
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Translating cropland and trade connectivity for mitigation of emerging pathogens: Priority locations globally and focusing on the Americas. Plex Sulá A.I., Alcalá Briseño R.I., Xing Y., Etherton B.A., Andersen K.F., Andrade-Piedra J.L., Avelino Jacques, Dita Rodriguez Miguel Angel, Gazis Romina, Hodson D., Jarvis Andrew, Kenyon L., Kreuze Jan, Mahabaleswara S.L., Mosquera Cifuentes Gloria Maria, Sonder K., Vallad Gary E., Garrett K.. 2022. Phytopathology, 112 (11S), suppl. Plant Health 2022, S3.20 Plant Health 2022, Pittsburgh, États-Unis, 6 Août 2022/10 Août 2022.
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Two viruses associated with mosaic symptoms in pandan grass (Pandanus amaryllifolius) in Florida. Alvarez-Quinto Robert A., Grinstead Samuel, Rott Philippe, Mollov Dimitre S.. 2022. Phytopathology, 112 (11S), suppl. Plant Health 2022, Résumé, S3.164 Plant Health 2022, Pittsburgh, États-Unis, 6 Août 2022/10 Août 2022.
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Virion-associated nucleic acid-based metagenomics: A decade of advances in molecular characterization of plant viruses. Moubset Oumaima, François Sarah, Maclot François, Palanga Essowé, Julian Charlotte, Claude Lisa, Fernandez Emmanuel, Rott Philippe, Daugrois Jean-Heinrich, Antoine-Lorquin Aymeric, Bernardo Pauline, Blouin Arnaud G., Temple Coline, Kraberger Simona, Fontenele Rafaela S, Harkins Gordon William, Ma Yuxin, Marais Armelle, Candresse Thierry, Ben Chehida Sélim, Lefeuvre Pierre, Lett Jean-Michel, Varsani Arvind, Massart Sébastien, Ogliastro Mylène, Martin Darren Patrick, Filloux Denis, Roumagnac Philippe. 2022. Phytopathology, 112 (11) : 2253-2272.
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Wind-flow dynamics and spore-like particle dispersal over agroforestry systems: Impact of the tree density distribution. Dupont Sylvain, Irvine Mark R., Motisi Natacha, Allinne Clémentine, Avelino Jacques, Bagny-Beilhe Leïla. 2022. Agricultural and Forest Meteorology, 327:109214, 20 p.
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The impact of the rice production system (irrigated vs lowland) on root-associated microbiome from farmer's fields in western Burkina Faso. Barro Mariam, Wonni Issa, Simonin Marie, Kassankogno Abalo Itolou, Klonowska Agnieszka, Moulin Lionel, Béna Gilles, Somda Irénée, Brunel Caroline, Tollenaere Charlotte. 2022. FEMS Microbiology, Ecology, 98 (9):fiac085, 17 p.
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A newly emerging alphasatellite affects banana bunchy top virus replication, transcription, siRNA production and transmission by aphids. Guyot Valentin, Rajeswaran Rajendran, Chu Huong Cam, Karthikeyan Chockalingam, Laboureau Nathalie, Galzi Serge, Mukwa Lyna F. T., Krupovic Mart, Kumar P. Lava, Iskra Caruana Marie-Line, Pooggin Mikhail. 2022. PLoS Pathogens, 18 (4):e1010448, 40 p.
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The phytoplasma associated with Bogia coconut syndrome in Papua New Guinea is a new phytoplasma in the group of the lethal yellowing syndromes (LYTS) of coconut and other palms. Dollet Michel, Fabre Sandrine, Beaumont Maëva, Barnabé Christian, Namaliu Yak, Kembu Alfred, Bourdeix Roland. 2022. Tropical Plant Pathology, 47 (4) : 530-552.
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A polyphasic approach reveals novel genotypes and updates the genetic structure of the banana fusarium wilt pathogen. Mostert Diane, Wicker Emmanuel, de Jager Mignon M., Al Kaabi Saif M., O'Neill Wayne, Perry Suzy, Li Chunyu, Ganyun Yi, Pegg Kenneth G., Mostert Lizel, Viljoen Altus. 2022. Microorganisms, 10 (2):269, 18 p.
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pr2-primers: An 18S rRNA primer database for protists. Vaulot Daniel, Geisen Stefan, Mahe Frédéric, Bass David. 2022. Molecular Ecology Resources, 22 (1) : 168-179.
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A rapid and simple method for DNA preparation of Magnaporthe oryzae from single rice blast lesions for PCR-based molecular analysis. Dong Liying, Liu Shuguang, Li Jing, Tharreau Didier, Liu Pei, Tao Dayun, Yang Qinzhong. 2022. Plant Pathology Journal, 38 (6) : 679-684.
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Additive genetic variance for traits least related to fitness increases with environmental stress in the desert locust, Schistocerca gregaria. Chapuis Marie-Pierre, Pélissié Benjamin, Piou Cyril, Chardonnet Floriane, Pagès Christine, Foucart Antoine, Chapuis Elodie, Jourdan-Pineau Hélène. 2021. Ecology and Evolution, 11 (20) : 13930-13947.
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Alfalfa leaf curl virus is efficiently acquired by its aphid vector Aphis craccivora but inefficiently transmitted. Ryckebusch Faustine, Peterschmitt Michel, Granier Martine, Sauvion Nicolas. 2021. Journal of General Virology, 102 (2):1516, 18 p.
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Altitude and community traits explain rain forest stand dynamics over a 2370-m altitudinal gradient in Costa Rica. Hernández Gordillo Alba Loren, Vilchez Mendoza Sergio José, Ngo Bieng Marie-Ange, Delgado Diego, Finegan Bryan. 2021. Ecosphere, 12 (12):e03867, 11 p.
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Assessment of atmospheric and soil water stress impact on a tropical crop: The case of Theobroma cacao under Harmattan conditions in eastern Ghana. Della Sala Pietro, Cilas Christian, Gimeno Teresa E., Wohl Steven, Opoku Stephen Yaw, Găinuşă-Bogdan Alina, Ribeyre Fabienne. 2021. Agricultural and Forest Meteorology, 311:108670, 17 p.
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Ca2+ sensor-mediated ROS scavenging suppresses rice immunity and is exploited by a fungal effector. Gao Mingjun, He Yang, Yin Xin, Zhong Xiangbin, Yan Bingxiao, Wu Yue, Chen Jin, Li Xiaoyuan, Zhai Keran, Huang Yifeng, Gong Xiangyu, Chang Huizhong, Xie Shenghan, Liu Jiyun, Yue Jiaxing, Xu Jianlong, Zhang Guiquan, Deng Yiwen, Wang Ertao, Tharreau Didier, Wang Guo-Liang, Yang Weibing, He Zuhua. 2021. Cell, 184 (21):e17 : 5392-5404.
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Central American and Caribbean population history of the Pseudocercospora fijiensis fungus responsible for the latest worldwide pandemics on banana. Carlier Jean, Robert Stéphanie, Roussel Véronique, Chilin-Charles Yolande, Lubin Adjanoh Nadia, Gilabert Aude, Abadie Catherine. 2021. Fungal Genetics and Biology, 148:103528, 10 p.
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Characterisation of the viral community associated with the Alfalfa Weevil (Hypera postica) and its host plant, Alfalfa (Medicago sativa). François Sarah, Antoine-Lorquin Aymeric, Kulikowski Maximilien, Frayssinet Marie, Filloux Denis, Fernandez Emmanuel, Roumagnac Philippe, Froissart Rémy, Ogliastro Mylène. 2021. Viruses, 13 (5):791, 17 p.
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Clustering analyses of secreted proteins of the sugarcane orange rust pathogen Puccinia kuehnii. Cardenas Daniela E., Cheema J., Sood Sushma, Carrillo-Tarazona Yisel, Huguet-Tapia Jose, Saunders Diane G.O., Rott Philippe, Cano Liliana M.. 2021. Phytopathology, 111 (10S), suppl. Plant Health 2021, Résumé, S2.58 Plant Health 2022, Pittsburgh, États-Unis, 6 Août 2022/10 Août 2022.
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Cocoa breeding must take into account the competitive value of cocoa trees. Trebissou Caudou Inago, Tahi Mathias Gnion, Munoz Facundo, Sanchez Leopoldo, N'Guetta Assanvo Simon-Pierre, Cilas Christian, Ribeyre Fabienne. 2021. European Journal of Agronomy, 128:126288, 10 p.
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Comparison of the virome of quarantined sugarcane varieties and the virome of grasses growing near the quarantine station. Daugrois Jean-Heinrich, Filloux Denis, Julian Charlotte, Claude Lisa, Ferdinand Romain, Fernandez Emmanuel, Fontes Hugo, Rott Philippe, Roumagnac Philippe. 2021. Viruses, 13 (5):922, 17 p.
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Convergent adaptation to quantitative host resistance in a major plant pathogen. Carlier Jean, Bonnot François, Roussel Véronique, Ravel Sébastien, Martinez Reina Teresa, Perez-Vicente Luis, Abadie Catherine, Wright Stephen. 2021. Mbio, 12 (1):e03129-20, 18 p.
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Critical evaluation of cross-sectoral collaborations to inform the implementation of the "One Health" approach in Guadeloupe. Gruel Gaëlle, Diouf Mame Boucar, Abadie Catherine, Chilin-Charles Yolande, Etter Eric, Geffroy Mariana, Herrmann Storck Cécile, Meyer Damien, Pagès Nonito, Pressat Gersende, Teycheney Pierre-Yves, Umber Marie, Vega-Rúa Anubis, Pradel Jennifer. 2021. Frontiers in Public Health, 9:652079, 13 p.
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De la paire de bottes à la paire de bases : de l'intérêt d'étudier l'écologie des viromes de plantes. Maclot François, Candresse Thierry, Filloux Denis, Rott Philippe, Malmstrom Carolyn M., van der Vlugt René, Massart Sébastien, Roumagnac Philippe. 2021. Virologie, 25 (1) : 29-42.
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Distribution, phylogeny, and pathogenicity of Xanthomonas albilineans causing sugarcane leaf scald in Mexico. Cervantes-Romero Benjamín, Pérez-Rodríguez Paulino, Rott Philippe, Valdez-Balero Apolonio, Osnaya-González Mónica, Robledo-Paz Alejandrina, Hernández-Juárez Camilo, Crossa José, Rosas-Saito Greta H., Silva-Rojas Hilda V.. 2021. Crop Protection, 150:105799, 9 p.
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Diversity and geographical structure of Xanthomonas citri pv. citri on citrus in the South West Indian Ocean Region. Pruvost Olivier, Richard Damien, Boyer Karine, Javegny Stéphanie, Boyer Claudine, Chiroleu Frédéric, Grygiel Pierre, Parvedy Evelyne, Robène Isabelle, Maillot-Lebon Véronique, Hamza Abdou Azali, Lobin Kanta Kumar, Naiken Marc, Vernière Christian. 2021. Microorganisms, 9 (5):945, 15 p.
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Eight species of Poaceae are hosting different genetic and pathogenic strains of Sugarcane mosaic virus in the Everglades Agricultural Area. Hincapie Martha, Sood Sushma, Mollov Dimitre S., Odero D. Calvin, Grisham Michael P., Rott Philippe. 2021. Phytopathology, 111 (10) : 1862-1869.
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Extrachromosomal viral DNA produced by transcriptionally active endogenous viral elements in non-infected banana hybrids impedes quantitative PCR diagnostics of banana streak virus infections in banana hybrids. Ricciuti Emeline, Laboureau Nathalie, Noumbissié Guy, Chabannes Matthieu, Sukhikh Natalia, Pooggin Mikhail, Iskra Caruana Marie-Line. 2021. Journal of General Virology, 102 (11)
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First historical genome of a crop bacterial pathogen from herbarium specimen: Insights into citrus canker emergence. Campos Paola, Groot Crego Clara, Boyer Karine, Gaudeul Myriam, Baider Claudia, Richard Damien, Pruvost Olivier, Roumagnac Philippe, Szurek Boris, Becker Nathalie, Gagnevin Lionel, Rieux Adrien. 2021. PLoS Pathogens, 17 (7):e1009714, 25 p.
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Functional land cover scale for three insect pests with contrasting dispersal strategies in a fragmented coffee-based landscape in Central Kenya. Mosomtai Gladys, Azrag Abdelmutalab G.A., Babin Régis, Abdel-Rahman Elfatih M., Odindi John, Mutanga Onisimo, Tonnang Henri E.Z., Landmann Tobias, David Guillaume. 2021. Agriculture, Ecosystems and Environment, 319:107558, 10 p.
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Genetic diversity of Rice stripe necrosis virus and new insights into evolution of the genus Benyvirus. Bagayoko Issiaka, Celli Marcos Giovanni, Romay Gustavo, Poulicard Nils, Pinel-Galzi Agnès, Julian Charlotte, Filloux Denis, Roumagnac Philippe, Sérémé Drissa, Bragard Claude, Hebrard Eugénie. 2021. Viruses, 13:737, 12 p.
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Genome characterization and diversity of trifolium virus 1: identification of a novel legume-infecting capulavirus. Ma Yuxin, Svanella‑Dumas Laurence, Julian Charlotte, Galzi Serge, Fernandez Emmanuel, Yvon Michel, Pirolles Elodie, Lefebvre Marie, Filloux Denis, Roumagnac Philippe, Candresse Thierry. 2021. Archives of Virology, 166 : 2573-2578.
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How do invasion syndromes evolve? An experimental evolution approach using the ladybird Harmonia axyridis. Foucaud Julien, Hufbauer Ruth A., Ravigné Virginie, Olazcuaga Laure, Loiseau Anne, Ausset Aurélien, Wang Su, Zang Lian-Sheng, Leménager Nicolas, Tayeh Ashraf, Weyna Arthur, Gneux Pauline, Bonnet Elise, Dreuilhe Vincent, Poutout Bastien, Estoup Arnaud, Facon Benoît. 2021. Peer Community Journal, 1:e33, 25 p.
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ICTV Virus Taxonomy Profile: Geminiviridae 2021. Fiallo-Olivé Elvira, Lett Jean-Michel, Martin Darren Patrick, Roumagnac Philippe, Varsani Arvind, Zerbini F. Murilo, Navas-Castillo Jesús. 2021. Journal of General Virology, 102 (12), 2 p.
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Identification of the begomoviruses squash leaf curl virus and watermelon chlorotic stunt virus in various plant samples in North America. Fontenele Rafaela S, Bhaskara Amulya, Cobb Ilaria N., Majure Lucas C., Salywon Andrew M., Avalos-Calleros Jesús, Argüello‐Astorga Gerardo R., Schmidlin Kara, Roumagnac Philippe, Ribeiro Simone G., Kraberger Simona, Martin Darren Patrick, Lefeuvre Pierre, Varsani Arvind. 2021. Viruses, 13 (5):810, 17 p.
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Identification, molecular and biological characterization of two novel secovirids in wild grass species in Belgium. Maclot François, Debue Virginie, Blouin Arnaud G., Fontdevilla Pareta Núria, Tamisier Lucie, Filloux Denis, Massart Sébastien. 2021. Virus Research, 298:198397, 6 p.
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Molecular detection and quantification of Xanthomonas albilineans in juice from symptomless sugarcane stalks using a real-time quantitative PCR assay. Shi Yang, Zhao Jian-Ying, Zhou Jing-Ru, Ntambo Mbuya Sylvain, Xu Peng-Yuan, Rott Philippe, Cao San-Ji. 2021. Plant Disease, 105 (11) : 3451-3458.
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Molecular epidemiology of Xanthomonas euvesicatoria strains from the Balkan Peninsula revealed by a new multiple-locus variable-number tandem-repeat analysis scheme. Vancheva Taca, Bogatzevska Nevena, Moncheva Penka, Mitrev Sasa, Vernière Christian, Koebnik Ralf. 2021. Microorganisms, 9 (3):536, 19 p.
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Monitoreo de servicios ecosistémicos en un observatorio de cafetales agroforestales. Recomendaciones para el sector cafetalero. Roupsard Olivier, Allinne Clémentine, Van Den Meersche Karel, Vaast Philippe, Rapidel Bruno, Avelino Jacques, Jourdan Christophe, Le Maire Guerric, Bonnefond Jean-Marc, Harmand Jean-Michel, Dauzat Jean, Albrecht Alain, Chevallier Tiphaine, Barthès Bernard, Clément-Vidal Anne, Gómez-Delgado Federico, Charbonnier Fabien, Benegas Laura, Welsh Kristen, Kinoshita Rintaro, Vezy Rémi, Pérez-Molina Junior Pastor, Kim John, Taugourdeau Simon, Defrenet Elsa, Nespoulous Jérôme, Rançon Florian, Guidat Florian, Cambou Aurélie, Soma Maxime, Mages Carolin, Schnabel Florian, Prieto Iván, Picart Delphine, Duthoit Maxime, Rocheteau Alain, Do Frédéric C., de Melo Virginio Filho Elias, Moussa Rachida, Le Bissonnais Yves, Valentin Christian, Sánchez-Murillo Ricardo, Roumet Catherine, Stokes Alexia, Vierling Lee A., Eitel Jan U.H., Dreyer Erwin, Saint-André Laurent, Malmer Anders, Loustau Denis, Isaac Marney E., Martin Adam R., Priemé Anders, Eberling Bo, Madsen Mikael, Robelo Alfonso, Robelo Diego, Borgonovo Carlos, Lehner Peter, Ramirez Guillermo, Jara Manuel, Acuna Vargas Rafael, Barquero Alejandra, Fonseca Carlos, Gay Frédéric. 2021. AgroForestería en las Américas (51) : 152-164.
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Nanopore sequencing is a credible alternative to recover complete genomes of geminiviruses. Ben Chehida Sélim, Filloux Denis, Fernandez Emmanuel, Moubset Oumaima, Hoareau Murielle, Julian Charlotte, Blondin Laurence, Lett Jean-Michel, Roumagnac Philippe, Lefeuvre Pierre. 2021. Microorganisms, 9:903, 15 p.
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New world cactaceae plants harbor diverse geminiviruses. Fontenele Rafaela S, Salywon Andrew M., Majure Lucas C., Cobb Ilaria N., Bhaskara Amulya, Avalos‐Callero Jesús A., Argüello‐Astorga Gerardo R., Schmidlin Kara, Khalifeh Anthony, Smith Kendal, Schreck Joshua, Lund Michael, Köhler Matias, Wojciechowski Martin, Hodgson Wendy C., Puente‐Martinez Raul, Van Doorslaer Koenraad, Kumari Safaa G., Oyeniran Kehinde A., Vernière Christian, Filloux Denis, Roumagnac Philippe, Lefeuvre Pierre, Ribeiro Simone G., Kraberger Simona, Martin Darren Patrick, Varsani Arvind. 2021. Viruses, 13 (4):694, 27 p.
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Novel ampeloviruses infecting cassava in Central Africa and the South-West Indian Ocean Islands. Kwibuka Yves, Bisimwa Espoir, Blouin Arnaud G., Bragard Claude, Candresse Thierry, Faure Chantal, Filloux Denis, Lett Jean-Michel, Maclot François, Marais Armelle, Ravelomanantsoa Santatra, Shakir Sara, Vanderschuren Hervé, Massart Sébastien. 2021. Viruses, 13 (6), n.spéc. Plant Virus Surveillance and Metagenomics:1030, 17 p.
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Novel circular DNA virus identified in Opuntia discolor (Cactaceae) that codes for proteins with similarity to those of geminiviruses. Fontenele Rafaela S, Köhler Matias, Majure Lucas C., Avalos‐Callero Jesús A., Argüello‐Astorga Gerardo R., Font Fabián, Vidal Andreza H., Roumagnac Philippe, Kraberger Simona, Martin Darren Patrick, Lefeuvre Pierre, Varsani Arvind. 2021. Journal of General Virology, 102 (11), 7 p.
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Occurrence of two races of Puccinia kuehnii causing orange rust of sugarcane in Florida. Sanjel Santosh, Hincapie Martha, Wang Yunwen, Todd James, Chaulagain Bhim, Sood Sushma, Comstock Jack C., Raid Richard Neil, Rott Philippe. 2021. Plant Pathology, 70 (7) : 1616-1625.
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Parameter estimation in a PDE model for the spatial spread of cocoa black pod disease. Nembot Fomba Christian Gaele, Ten Hoopen Gerben Martijn, Soubeyran Samuel, Roques Lionel, Ambang Zachée, Soh Takam. 2021. Bulletin of Mathematical Biology, 83:101, 28 p.
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Predictive modeling of brown rust of sugarcane based on temperature and relative humidity in Florida. Chaulagain Bhim, Small Ian M., Shine James M., Raid Richard Neil, Rott Philippe. 2021. Phytopathology, 111 (8) : 1401-1409.
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Quantitative proteomic analysis of the sugarcane defense responses incited by Acidovorax avenae subsp. avenae causing red stripe. Zhou Jing-Ru, Sun Hui-Dong, Ali Ahmed, Rott Philippe, Javed Talha, Fu Hua-Ying, Gao San-Ji. 2021. Industrial Crops and Products, 162:113275, 11 p.
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Spatiotemporal survey of multiple rice diseases in irrigated areas compared to rainfed lowlands in the western Burkina Faso. Barro Mariam, Kassankogno Abalo Itolou, Wonni Issa, Sérémé Drissa, Somda Irénée, Kabore Kouka Hilaire, Béna Gilles, Brugidou Christophe, Tharreau Didier, Tollenaere Charlotte. 2021. Plant Disease, 105 (12) : 3889-3899.
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Structure of African populations of Pyricularia oryzae from rice. Odjo Théophile, Diagne Diariatou, Adreit Henri, Milazzo Joëlle, Raveloson Harinjaka, Andriantsimialona Dodelys, Kassankogno Abalo Itolou, Ravel Sébastien, Dieudonné Gumedzoé Yawovi Mawuéna, Ouedraogo Ibrahima, Koita Ousmane, Silué Drissa, Tharreau Didier. 2021. Phytopathology, 111 (8) : 1428-1437.
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Taxonomy update for the family Alphasatellitidae: New subfamily, genera, and species. Varsani Arvind, Martin Darren Patrick, Randles John W., Vetten H. Josef, Thomas John, Fiallo-Olivé Elvira, Navas-Castillo Jesús, Lett Jean-Michel, Zerbini F. Murilo, Roumagnac Philippe, Gronenborn Bruno. 2021. Archives of Virology, 166 : 3503-3511.
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Virus et chercheurs sous le soleil de Montpellier. Editorial. Gosselin-Grenet Anne-Sophie, Servan de Almeida Renata, Roumagnac Philippe, Ayouba Ahidjo, Simonin Yannick, Nisole Sébastien. 2021. Virologie, 25 (1), suppl. : 3-5.
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Ouvrage

Feuille de route des recherches du Cirad à 10 ans sur la filière Horticulture. Urbino Cica, Kahane Rémi, Delatte Hélène, Weil Mathieu. 2023. Montpellier : CIRAD, 28 p. ISBN 978-2-87614-835-2
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Roadmap of research activities of CIRAD over 10 years in the sector of horticulture. Kahane Rémi, Urbino Cica, Delatte Hélène, Weil Mathieu. 2023. Montpellier : CIRAD, 28 p. ISBN 978-2-87614-836-9
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Guide des maladies et des insectes ravageurs de la canne à sucre en Guadeloupe. Grossard Fredy, Daugrois Jean-Heinrich, Goebel François-Régis. 2022. Abymes : CTCS-Guadeloupe, 25 p. ISBN 978-2-9586682-0-4
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Practical guidelines for early screening and field evaluation of banana against Fusarium wilt, Pseudocercospora leaf spots and drought. Dita Miguel A., Teixeira Luiz, Li Chunyu, Zheng Sijun, O'Neill Wayne, Daniels Jeff, Perez-Vicente Luis, Carreel Françoise, Roussel Véronique, Carlier Jean, Abadie Catherine, Carpentier Sébastien Christian, Iyyakutty Ravi, Kissel Ewaut, Van Wesemael Jelle, Chase Rachel, Tomekpé Kodjo, Roux Nicolas. 2021. Montpellier : Biodiversity International, 83 p. ISBN 978-92-9255-192-6
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Chapitre d'ouvrage

Diseases of sugarcane. Rott Philippe, Raid Richard Neil, Hoy J.W.. 2023. In : Diseases of field crops. Hollier Clayton A. (ed.), Padgett G. Boyd (ed.), Draper Martin A. (ed.). Saint Paul : APS Press, 287-311. ISBN 978-0-89054-669-7
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La surveillance active des menaces phytosanitaires émergentes : le défi de la mise en oeuvre opérationnelle. Michel Lucie, Grosdidier Basile, Houillon Ismael, Ravigné Virginie. 2023. In : Crises sanitaires en agriculture. Les espèces invasives sous surveillance. Lannou Christian (ed.), Rasplus Christian (ed.), Soubeyrand Samuel (ed.), Gauthier Mathieu (ed.), Rossi Jean-Pierre (ed.). Versailles : Ed. Quae, 267-281. (Savoir faire) ISBN 978-2-7592-3482-0
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Coffee in Central America. Avelino Jacques, Savary Serge. 2022. In : Global plant health assessment. Willocquet Leatitia (ed.), Singh Manjari (ed.), Sah Sonam (ed.), Bove Federica (ed.), Savary Serge (ed.), Yuen Jonathan (ed.). s.l. : ISPP, 98-102. ISBN 978-91-988233-1-8
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Invasive tomato yellow leaf curl virus recombinants challenge virus diagnosis and disease management. Urbino Cica, Jammes Margaux, Belabess Zineb, Troadec Eric, Autechaud Alexandre, Peterschmitt Michel. 2022. In : Geminivirus: detection, diagnosis and management. Gaur R.K. (ed.), Sharma Pradepp (ed.), Czosnek Henryk (ed.). Londres : Academic Press, 497-511. ISBN 978-0-323-90587-9
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Promoting crop pest control by plant diversification in agricultural landscapes: A conceptual framework for analysing feedback loops between agro-ecological and socio-economic effects. Vialatte Aude, Tibi Anaïs, Alignier Audrey, Angeon Valérie, Bedoussac Laurent, Bohan David A., Bougherara Douadia, Carpentier Alain, Castagneyrol Bastien, Cordeau Stéphane, Courtois Pierre, Deguine Jean-Philippe, Enjalbert Jérôme, Fabre Frédéric, Féménia Fabienne, Fréville Hélène, Goulet Frédéric, Grateau Régis, Grimonprez Benoît, Gross Nicolas, Hannachi Mourad, Jeanneret Philippe, Kuhfuss Laure, Labarthe Pierre, Launay Marie, Lefebvre Marianne, Lelièvre Virginie, Lemarié Stéphane, Martel Gilles, Masson Abel, Navarrete Mireille, Plantegenest Manuel, Ravigné Virginie, Rusch Adrien, Suffert Frédéric, Tapsoba Abdoulaye, Thérond Olivier, Thoyer Sophie, Martinet Vincent. 2022. In : The future of agricultural landscape, Part III. Bohan David A. (ed.), Dumbrell Alex J. (ed.), Vanbergen Adam J. (ed.). Cambridge : Academic Press, 133-165. (Advances in Ecological Research, 65) ISBN 978-0-323-91503-8
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Spotlight on the recently discovered aphid-transmitted geminiviruses. Ryckebusch Faustine, Sauvion Nicolas, Granier Martine, Peterschmitt Michel. 2022. In : Geminivirus: detection, diagnosis and management. Gaur R.K. (ed.), Sharma Pradeep (ed.), Czosnek Henryk (ed.). Londres : Academic Press, 95-105. ISBN 978-0-323-90587-9
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Coupling ecological network analysis with high-throughput sequencing-based surveys: Lessons from the next-generation biomonitoring project. Dubart Maxime, Alonso Pascal, Barroso-Bergada Didac, Becker Nathalie, Bethune Kevin, Bohan David A., Boury Christophe, Cambon Marine, Canard Elsa, Chancerel Emilie, Chiquet Julien, David Patrice, De Manincor Natasha, Donnet Sophie, Duputié Anne, Facon Benoît, Guichoux Erwan, Le Minh Tâm, Ortiz-Martínez Sebastián, Piouceau Lucie, Sacco-Martret de Préville Ambre, Plantegenest Manuel, Poux Céline, Ravigné Virginie, Robin Stéphane, Trillat Marine, Vacher Corinne, Vernière Christian, Massol François. 2021. In : The future of agricultural landscape, Part III. Bohan David A. (ed.), Dumbrell Alex J. (ed.), Vanbergen Adam J. (ed.). Cambridge : Academic Press, 367-430. (Advances in Ecological Research, 65) ISBN 978-0-323-91503-8
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Guidelines for the evaluation of Pseudocercospora resistance to leaf spots of banana. Perez-Vicente Luis, Carreel Françoise, Roussel Véronique, Carlier Jean, Abadie Catherine. 2021. In : Practical guidelines for early screening and field evaluation of banana against Fusarium wilt, Pseudocercospora leaf spots and drought. Dita Miguel A. (ed.), Teixeira Luiz (ed.), Li Chunyu (ed.), Zheng Sijun (ed.), O'Neill Wayne (ed.), Daniels Jeff (ed.), Perez-Vicente Luis (ed.), Carreel Françoise (ed.), Roussel Véronique (ed.), Carlier Jean (ed.), Abadie Catherine (ed.), et al.. Montpellier : Biodiversity International, 20-63. ISBN 978-92-9255-192-6
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Prévisualisation

Scolyte des baies : piégeage et protection intégrée. Dufour Bernard, Wagianto Wagianto, Ginting Enda Dewi, Bossolaco Laurent. 2021. In : La grande histoire de la coopération scientifique franco indonésienne = Sejarag panjang kerja sama ilmiah franis indonesia. Dovert Stéphane (ed.), Hameg Meryem (ed.), Langit Rinesti Karina (ed.). Toulouse : Ed. Arkuiris-Afterhours Books, p. 82. ISBN 978-2-919090-32-7 ; 978-602-6990-63-1
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Communication invitée

Global scenario of sugarcane diseases and recent developments on disease management. Rott Philippe, Daugrois Jean-Heinrich, Roumagnac Philippe. 2021. In : Proceedings of International Conference on Sugarcane Research: Sugarcane for Sugar and Beyond. Palaniswami C. (ed.), Hemaprabha G. (ed.), Viswanathan R. (ed.), Karuppaiyan R. (ed.), Mohanraj K. (ed.), Mahadeva Swamy H.K. (ed.), Bakshi Ram (ed.). ICAR, SBI, Tamil Nadu Agricultural University, SSRD. Coimbatore : SSRD, 489-491. (978-93-85267-30-7) International Conference on Sugarcane Research: Sugarcane for Sugar and Beyond (CaneCon2021), Coimbatore, Inde, 19 Juin 2021/22 Juin 2021.
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Communication avec actes

Innovations and policies based on 20 years of findings from a coffee agroforestry trial. Virginio Filho Elias de Melo, Somarriba Eduardo, Cerda Rolando, Casanoves Fernando, Cordero Carlos A., Avelino Jacques, Roupsard Olivier, Rapidel Bruno, Vaast Philippe, Harmand Jean-Michel, Staver Charles, Beer John, Mora Argenis, Morales Víctor Hugo, Fonseca Carlos, Vargas Victor J., Ramírez Luis Guillermo, Soto Gabriela, Isaac Marney E., Umaña L.D., Fernandez A.T., Romero Luis Fernando, Gómez René León, Caicedo Carlos, Pico Jimmy, Montagnini Florencia, Haggar Jeremy. 2024. In : VIII Scientific Wallace Conference - Proceedings. Casanoves F. (ed.), Mercado L. (ed.), Argüello M. (ed.), Abadie C. (ed.), Benegas L. (ed.), Cerda R. (ed.), Imbach P. (ed.), Madrigal R. (ed.), Martínez-Salinas A. (ed.), Muschler R. (ed.), Sepúlveda C. (ed.), Vílchez S. (ed.). CATIE. Turrialba : CATIE, Résumé, 42-43. (Serie Divulgativa, 24) ISBN 978-9977-57-795-1 Scientific Wallace Conference. 8, Turrialba, Costa Rica, 31 Mai 2023/2 Juin 2023.
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Characterization of the vector-mediated transmission of a betasatellite between different helper begomoviruses. Magdy Ibrahim Fouad Noun, Peterschmitt Michel, Blanc Stéphane, Thébaud Gaël, Urbino Cica. 2023. In : 19e Rencontres de virologie végétale (RVV2023). Résumés. SFV, SFP, RIVOC, IRD, INRAE, CNRS, CIRAD, Agropolis. Aussois : SFV, Résumé, p. 25. Rencontres de virologie végétale (RVV2023). 19, Aussois, France, 15 Janvier 2023/19 Janvier 2023.
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Comparison of the signal transduction efficiency in the Vfm quorum sensing system of the genus Dickeya according to the polymorphism of the vfm genes. Yammine Sarah, Boulanger Malo, Hugouvieux-Cotte-Pattat Nicole, Reverchon Sylvie, Cociancich Stéphane, Royer Monique. 2023. In : 16th Plant Bacteria Meeting. Abstract Booklet. INRAE. Aussois : INRAE, p. 44. Rencontres plantes-bactéries. 16, Aussois, France, 20 Mars 2023/24 Mars 2023.
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Emergence and evolution of novel lineage of Ralstonia solanacearum with expanded host range. Evseeva Daria, Pecrix Yann, Poussier Stéphane, Wicker Emmanuel, Kucka Marek, Chan Frank, Mccann Honour. 2023. In : 12th International Congress of Plant Pathology (ICPP 2023): One health for all plants, crops and trees. Book of abstracts. ISPP, SFP. Lyon : ISPP, Résumé, p. 1355. International Conference on Plant Pathology (ICPP 2023). 12, Lyon, France, 20 Août 2023/25 Août 2023.
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Evolutionary genomics of Ralstonia solanacearum emergence and host range expansion. Evseeva Daria, Pecrix Yann, Kucka Marek, Chan Frank, Poussier Stéphane, Wicker Emmanuel, Mccann Honour. 2023. In : 16th Plant Bacteria Meeting. Abstract Booklet. INRAE. Aussois : INRAE, Résumé, 81. Rencontres plantes-bactéries. 16, Aussois, France, 20 Mars 2023/24 Mars 2023.
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Herbaria in natural history collections illuminate the evolutionary history and emergence of Citrus bacterial canker. Gagnevin Lionel, Campos Paola E, Pruvost Olivier, Boyer Karine, Becker Nathalie, Rieux Adrien. 2023. In : 16th Plant Bacteria Meeting. Abstract Booklet. INRAE. Aussois : INRAE, Résumé, 83. Rencontres plantes-bactéries. 16, Aussois, France, 20 Mars 2023/24 Mars 2023.
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INDICANTS project : INnovative DIagnostiCs for bANana paThogens Surveillance. Robene Isabelle, Bothma Sheryl, Maillot-Lebon Véronique, Pecrix Yann, Fenelon Babbitha, Matthews Megan, Reynaud Bernard, Coetzee Beatrix, Arietta Salgado Mikel, Wicker Emmanuel, Chilin-Charles Yolande, Gianinazzi Camilo, Mostert Diane, Viljoen Altus. 2023. In : 16th Plant Bacteria Meeting. Abstract Booklet. INRAE. Aussois : INRAE, Résumé, 161. Rencontres plantes-bactéries. 16, Aussois, France, 20 Mars 2023/24 Mars 2023.
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INDICANTS project : INnovative DIagnostiCs for bANana paThogens Surveillance. Robène Isabelle, Bothma Sheryl, Maillot-Lebon Véronique, Pecrix Yann, Fenelon Babbitha, Matthews Megan, Reynaud Bernard, Coetzee Beatrix, Arietta Salgado Mikel, Wicker Emmanuel, Chilin-Charles Yolande, Gianinazzi Camilo, Mostert Diane, Viljoen Altus. 2023. In : Southern African Society for Plant Pathologists Symposium (SASPP): Abstracts. SASPP. Stellenbosch : SASPP, Résumé, p. 11. Southern African Society for Plant Pathologists Symposium (SASPP), Stellenbosch, Afrique du Sud, 3 Avril 2023/3 Avril 2023.
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INDICANTS project : INnovative DIagnostiCs for bANana paThogens Surveillance. Robene Isabelle, Bothma Sheryl, Maillot-Lebon Véronique, Pecrix Yann, Fenelon Babbitha, Matthews Megan, Reynaud Bernard, Coetzee Beatrix, Arrieta Salgado Mikel, Wicker Emmanuel, Chilin-Charles Yolande, Gianinazzi Camilo, Mostert Diane, Viljoen Altus. 2023. In : 12th International Congress of Plant Pathology (ICPP 2023): One health for all plants, crops and trees. Book of abstracts. ISPP, SFP. Lyon : ISPP, p. 264. International Conference on Plant Pathology (ICPP 2023). 12, Lyon, France, 20 Août 2023/25 Août 2023.
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Impact of genetic diversity on diagnosis of sugarcane yellow leaf virus. Rott Philippe, Grinstead Samuel, Dallot Sylvie, Foster Zachary S. L., Daugrois Jean-Heinrich, Fernandez Emmanuel, Kaye Claudia, Hendrickson Leticia, Hu Xiaojun, Adhikari Bishwo, Malapi Martha, Grunwald Niklaus J., Roumagnac Philippe, Mollov Dimitre S.. 2023. In : 19e Rencontres de virologie végétale (RVV2023). Résumés. SFV, SFP, RIVOC, IRD, INRAE, CNRS, CIRAD, Agropolis. Aussois : SFV, Résumé, p. 121. Rencontres de Virologie Végétale (RVV2023). 19, Aussois, France, 15 Janvier 2023/19 Janvier 2023.
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Once upon a time, the VANA story based on the review "virion-associated nucleic acid-based metagenomics : a decade of advances in molecular characterization of plant viruses". Moubset Oumaima, François Sarah, Maclot François, Palanga Essowé, Julian Charlotte, Claude Lisa, Fernandez Emmanuel, Rott Philippe, Daugrois Jean-Heinrich, Antoine-Lorquin Aymeric, Bernardo Pauline, Blouin Arnaud G., Temple Coline, Kraberger Simona, Fontenele Rafaela S, Harkins Gordon William, Ma Yuxin, Marais Armelle, Candresse Thierry, Ben Chehida Sélim, Lefeuvre Pierre, Lett Jean-Michel, Varsani Arvind, Massart Sébastien, Ogliastro Mylène, Martin Darren Patrick, Filloux Denis, Roumagnac Philippe. 2023. In : 19e Rencontres de virologie végétale (RVV2023). Résumés. SFV, SFP, RIVOC, IRD, INRAE, CNRS, CIRAD, Agropolis. Aussois : SFV, Résumé, p. 91. Rencontres de virologie végétale (RVV2023). 19, Aussois, France, 15 Janvier 2023/19 Janvier 2023.
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Stronger together: Synergy between an emerging monopartite begomovirus and a DNA-B component. Ouattara Alassane, Tiendrebeogo Fidèle, Becker Nathalie, Urbino Cica, Thébaud Gaël, Hoareau Murielle, Allibert Agathe, Chiroleu Frédéric, Vernerey Marie-Stéphanie, Traoré Edgar Valentin, Barro Nicolas, Traoré Oumar, Lefeuvre Pierre, Lett Jean-Michel. 2023. In : 19e Rencontres de virologie végétale (RVV2023). Résumés. SFV, SFP, RIVOC, IRD, INRAE, CNRS, CIRAD, Agropolis. Aussois : SFV, Résumé, p. 57. Rencontres de virologie végétale (RVV2023). 19, Aussois, France, 15 Janvier 2023/19 Janvier 2023.
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Sugarcane mild mosaic virus recognized as a new ampelovirus species infecting sugarcane. Mollov Dimitre S., Filloux Denis, Grinstead Samuel, Bolus Stephen, Claude Lisa, Fernandez Emmanuel, Julian Charlotte, Candresse Thierry, Lockhart Benham E.L., Roumagnac Philippe, Rott Philippe, Daugrois Jean-Heinrich. 2023. In : 19e Rencontres de virologie végétale (RVV2023). Résumés. SFV, SFP, RIVOC, IRD, INRAE, CNRS, CIRAD, Agropolis. Aussois : SFV, Résumé, p. 104. Rencontres de virologie végétale (RVV2023). 19, Aussois, France, 15 Janvier 2023/19 Janvier 2023.
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The long and challenging road to capitalize on plant-based extracts from the lab to the field. Silvie Pierre, Fazolin M., Do Prado Ribeiro L., Marchand P.A., Tchuwa F., Martin Pierre, Mkindi A.. 2023. In : ECE 2023 - Books of abstracts. Heraklion : Hellenic Entomogical Society, 334. European Congress of Entomology. XII, Heraklion, Grèce, 16 Septembre 2023/20 Septembre 2023.
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A natural single nucleotide mutation in the small RNA ArcZ of Dickeya solani switches off the antimicrobial activities against yeast and bacteria. Brual Typhaine, Effantin Geraldine, Baltenneck Julie, Attaiech Laetitia, Grobois Cloé, Royer Monique, Cigna Jérémy, Faure Denis, Hugouvieux-Cotte-Pattat Nicole, Gueguen Erwan. 2023. In : 16th Plant Bacteria Meeting. Abstract Booklet. INRAE. Aussois : INRAE, Résumé, 41. Rencontres plantes-bactéries. 16, Aussois, France, 20 Mars 2023/24 Mars 2023.
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An update on the old, new, and emerging viruses infecting sugarcane. Daugrois Jean-Heinrich, Mollov Dimitre S., Gao San-Ji, Roumagnac Philippe, Rott Philippe. 2023. In : Proceedings of the XXXI International Society of Sugar Cane Technologists. ISSCT. Hyderabad : ISSCT, 550-557. ISSCT Congress. 31, Hyderabad, Inde, 20 Février 2023/23 Février 2023.
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A novel method for estimating PandDs related yield loss in cacao pods in the Peruvian Amazonia. Ramos Marcos Javier, Allinne Clémentine, Alvarado Jhoner, Rapidel Bruno, Bagny-Beilhe Leïla. 2022. In : Proceedings of the Second International Symposium on Cocoa Research. ICCO, CIRAD. Montpellier : ICCO-CIRAD, 9 p. ISBN 978-2-9563177-0-8 ; 978-2-87614-798-0 International Symposium on Cocoa Research (ISCR 2022). 2, Montpellier, France, 5 Décembre 2022/7 Décembre 2022.
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Agro-climatic constraints to integrated Coffee Berry Borer Management. Dufour Bernard, Ribeyre Fabienne, Kerana I Wayan. 2021. In : 28th Conference of Association for the Science and Information on Coffee - Books of abstracts. ASIC. Montpellier : ASIC, Résumé, p. 86. Conference of Association for the Science and Information on Coffee (ASIC 2021). 28, Montpellier, France, 28 Juin 2021/1 Juillet 2021.
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Detection and counting of coffee berry borer (Hypothenemus hampei) using computer vision algorithm. Vilchez Mendoza Sergio José, Bagny-Beilhe Leïla, Bommel Pierre, Cilas Christian, Ronin Antoine, Carval Dominique. 2021. In : 28th Conference of Association for the Science and Information on Coffee - Books of abstracts. ASIC. Montpellier : ASIC, Résumé, p. 218. Conference of Association for the Science and Information on Coffee (ASIC 2021). 28, Montpellier, France, 28 Juin 2021/1 Juillet 2021.
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Estimating coffee pest and disease attacks embedded application. Prouteau Rémi, Ribeyre Fabienne, Jaeger Marc. 2021. In : 28th Conference of Association for the Science and Information on Coffee - Books of abstracts. ASIC. Montpellier : ASIC, Résumé, p. 54. Conference of Association for the Science and Information on Coffee (ASIC 2021). 28, Montpellier, France, 28 Juin 2021/1 Juillet 2021.
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A newly emerging alphasatellite of banana bunchy top virus affects viral replication, transcription, siRNA production and transmission by aphids. Guyot Valentin, Rajeswaran Rajendran, Chu Huong Cam, Karthikeyan Chockalingam, Laboureau Nathalie, Galzi Serge, Krupovic Mart, Kumar P. Lava, Iskra Caruana Marie-Line, Pooggin Mikhail. 2021. In : 18e Rencontres de virologie végétale. Résumés. SFV. Aussois : SFV, Résumé, p. 14. Rencontres de virologie végétale. 21, Aussois, France, 12 Septembre 2021/16 Septembre 2021.
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Communication par affiche

Cannabis virome reconstruction and antiviral rnai characterization by small rna sequencing. Miotti Niccolo, Sukhikh Natalia, Laboureau Nathalie, Casati Paola, Pooggin Mikhail. 2023. In : 12th International Congress of Plant Pathology (ICPP 2023): One health for all plants, crops and trees. Book of abstracts. ISPP, SFP. Lyon : ISPP, Résumé, p. 808. International Conference on Plant Pathology (ICPP 2023). 12, Lyon, France, 20 Août 2023/25 Août 2023.
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Complementary approaches to quantify and characterize inocula dynamics and leaf infection at plot level: Case of black leaf streak disease. Seidel Marine, Avelino Jacques, Chilin-Charles Yolande, Abadie Catherine. 2023. In : 12th International Congress of Plant Pathology (ICPP 2023): One health for all plants, crops and trees. Book of abstracts. ISPP, SFP. Lyon : ISPP, Résumé, 452-453. International Conference on Plant Pathology (ICPP 2023). 12, Lyon, France, 20 Août 2023/25 Août 2023.
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Specificity and genetic polymorphism of the Vfm quorum sensing system of the plant pathogenic bacteria of the genus Dickeya. Royer Monique, Hugouvieux-Cotte-Pattat Nicole, Gueguen Erwan, Le Guen Paul, Reverchon Sylvie, Cociancich Stéphane. 2023. In : 16th Plant Bacteria Meeting. Abstract Booklet. INRAE. Aussois : INRAE, Résumé, p. 120. Rencontres plantes-bactéries. 16, Aussois, France, 20 Mars 2023/24 Mars 2023.
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The long and challenging road to capitalize on knowledge of plant-based extracts. Martin Pierre, Huchard Marianne, Silvie Pierre. 2023. In : ECE 2023 - Books of abstracts. Hellenic Entomogical Society. Heraklion : Hellenic Entomogical Society, Résumé, 596. European Congress of Entomology. XII, Heraklion, Grèce, 16 Septembre 2023/20 Septembre 2023.
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The long and challenging road to capitalize on plant-based extracts use against agricultural crop pests in Senegal. Sall Sy Dienaba, Ba Mamadou, Silvie Pierre, Martin Pierre. 2023. In : ECE 2023 - Books of abstracts. Hellenic Entomogical Society. Heraklion : Hellenic Entomogical Society, Résumé, 563-564. European Congress of Entomology. XII, Heraklion, Grèce, 16 Septembre 2023/20 Septembre 2023.
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Assessment of risk posed by betasatellites on vegetable crops in the Mediterranean Basin. P13. Magdy Ibrahim Fouad Noun, Thébaud Gaël, Peterschmitt Michel, Blanc Stéphane, Urbino Cica. 2022. In : Brochure of the International Symposium on SSDna Viruses (IS3DV). Sète : Agropolis, Résumé, 87. International Symposium on ssDNA Viruses (IS3DV), Sète, France, 26 Septembre 2022/1 Octobre 2022.
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Effect of temperature on the Cacao swollen shoot virus (CSSV, Badnavirus) vection by the mealybug Planococcus citri to cocoa seedlings in the laboratory. Babin Didier, Cailleaud Chloé, Dufour Bernard, Dedieu Frédéric, Sauvion Nicolas, Ribeyre Fabienne. 2022. In : International Symosium on Cocoa Research: Booklet of abstracts. ICCO, CIRAD. Montpellier : ICCO-CIRAD, Résumé, 111-112. International Symposium on Cocoa Research (ISCR 2022), Montpellier, France, 5 Décembre 2022/7 Décembre 2022.
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Genome wide association studies of resistance of sugarcane (Saccharum spp.) to orange rust caused by Puccinia kuehnii. Dijoux Jordan, Rott Philippe, D'Hont Angélique, Hoarau Jean-Yves, Rio Simon. 2022. . Montpellier : s.n., 1 p. AGAP Days, Montpellier, France, 6 Décembre 2022/7 Décembre 2022.
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How do shade and auto-shade play a role in pest and disease regulation in cocoa agroforestry systems? Poster O6. Ramos Marcos Javier, Allinne Clémentine, Alvarado Jhoner, Rapidel Bruno, Bagny-Beilhe Leïla. 2022. In : En transition vers un monde viable. Québec : Université de Laval-IUAF-ICRAF, Résumé, 1 p. Congrès mondial d'agroforesterie. 5, Québec, Canada, 17 Juillet 2022/20 Juillet 2022.
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Infestation dynamics of mealybug vectors of the Cocoa swollen shoot virus in young cocoa plots surrounded by barrier crops in Soubré (South-West of Côte d'Ivoire). Babin Régis, Koffi Alain Déron, N'Guessan P., Oro Zokou Franck, Guéry Loreleï, Ouali N'Goran S-W. Mauricette. 2022. In : International Symosium on Cocoa Research: Booklet of abstracts. ICCO, CIRAD. Montpellier : ICCO-CIRAD, Résumé, 103-104. International Symposium on Cocoa Research (ISCR 2022), Montpellier, France, 5 Décembre 2022/7 Décembre 2022.
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Mathematical modeling to improve control strategies in the cocoa and black pod disease pathosystem. Nembot C., Ten Hoopen Gerben Martijn, Ducamp Michel, Takam Soh Patrice, Soubeyrand Samuel, Roques Lionel. 2022. . ICCO, CIRAD. Montpellier : ICCO, 10 p. International Symposium on Cocoa Research (ISCR 2022). 2, Montpellier, France, 5 Décembre 2022/7 Décembre 2022.
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Plant viruses are growing in the European virus archive network. Accotto Gian Paolo, Candresse Thierry, Chabannes Matthieu, Ciuffo Marina, Desbiez Cécile, Gentit Pascal, Glasa Miroslav, Iskra Caruana Marie-Line, Jelkmann Wilhelm, Marais Armelle, Menzel Wulf, Mulabisana Julia, Niehl Annette, Prat Christian, Predajna Lukas, Richert-Pöggeler Katja R., Romette Jean-Louis, Rubino Luisa, Urbino Cica, Verdin Eric, Ziebell Heiko, Zikeli Kerstin. 2022. In : International Advances in Plant Virology 2022. AAB. Ljubljana : AAB, 1 International Advances in Plant Virology (IAPV 2022), Ljubljana, Slovénie, 5 Octobre 2022/7 Octobre 2022.
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Dispersal of Coffee Berry Borer (Hypothenemus hampei) between coffee plantations and adjacent land uses. Vilchez Mendoza Sergio José, Ronin Antoine, Bommel Pierre, Cilas Christian, Bagny Leïla. 2021. . BES, SFE². Liverpool : British Ecological Society, 1 p. Ecology Across Borders 2021, Liverpool, Royaume-Uni, 12 Décembre 2021/15 Décembre 2021.
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Infective endogenous viral elements are tightly controlled by RNA silencing pathways in banana. Duroy Pierre-Olivier, Seguin Jonathan, Ravel Sébastien, Rajeswaran Rajendran, Laboureau Nathalie, Salmon Frédéric, Delos Jean-Marie Eric, Pooggin Mikhail, Iskra Caruana Marie-Line, Chabannes Matthieu. 2021. In : Epigenetic mechanisms of crop adaptation to climate change - Poster abstract book. COST. Florence : COST, p. 13. EpiCATCH COST Action Conference on "Epigenetic Mechanisms of Crop Adaptation to Climate Change". 1, Florence, Italie, 12 Juillet 2021/14 Juillet 2021.
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Communication sans actes

Approche intégrée de la santé en lien avec la santé publique dans une institution de recherche agronomique. Temple Ludovic, Abadie Catherine, Allinne Clémentine, Bagny-Beilhe Leïla, Binot Aurélie, Figuié Muriel, Garine-Wichatitsky Michel. 2023. . PNPLZER. Yaoundé : PNPLZER, Résumé, 1 p. One Health Forum, Yaoundé, Cameroun, 2 Novembre 2023/3 Novembre 2023.
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Comparison of the activity of the vfm quorum sensing system in different strains of the genus Dickeya. Yammine Sarah, Boulanger Malo, Hugouvieux-Cotte-Pattat Nicole, Reverchon Sylvie, Cociancich Stéphane, Royer Monique. 2023. In : 12th International Congress of Plant Pathology (ICPP 2023): One health for all plants, crops and trees. Book of abstracts. ISPP, SFP. Lyon : ISPP, Résumé, p. 1327. International Congress on Plant Pathology (ICPP 2023). 12, Lyon, France, 20 Août 2023/25 Août 2023.
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Comparison of the signal transduction efficiency in the vfm quorum sensing system of the genus Dickeya according to the polymorphism of the Vfm genes. Yammine Sarah, Boulanger Malo, Hugouvieux-Cotte-Pattat Nicole, Reverchon Sylvie, Cociancich Stéphane, Royer Monique. 2023. In : 12th International Congress of Plant Pathology (ICPP 2023): One health for all plants, crops and trees. Book of abstracts. ISPP, SFP. Lyon : ISPP, p. 583. International Congress on Plant Pathology (ICPP 2023). 12, Lyon, France, 20 Août 2023/25 Août 2023.
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Detection of cryptic viruses and characterization of antiviral defense in Cannabis sativa through small RNA sequencing. Miotti Niccolo, Sukhikh Natalia, Laboureau Nathalie, Casati Paola, Pooggin Mikhail. 2023. . SIV. Brescia : SIV, Résumé, 1 p. National Congress of the Italian Society for Virology. 7, Brescia, Italie, 25 Juin 2023/27 Juin 2023.
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Gestion de l'invasion de jassides dans les zones cotonnières d'Afrique de l'Ouest et du Centre - Vers une stratégie de recherche interdisciplinaire. Bachelier Bruno, Silvie Pierre, Brévault Thierry, Loison Romain, Giband Marc, Balarabe Oumarou, Lopez Llandres Ana, Jean Janine. 2023. . PR-PICA. Grand-Bassam : PR-PICA, 2 p. Réunion bilan du Programme Régional de Production Intégrée du Coton en Afrique (PR-PICA). 15, Grand-Bassam, Côte d'Ivoire, 12 Avril 2023/14 Avril 2023.
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Investigating the genetic variation of cacao pathogen Phytophthora megakarya. Gitto Andrew, Kolawole Oluwaseun O., Ten Hoopen Gerben Martijn, Bailey Bryan, Schlathoelter Ina, Henderson Donna, Marelli Jean-Philippe, Brawner Jeremy, Goss Erica. 2023. In : Fungi from Coast to Coast : Book of abstracts. s.l. : Acadia University, Résumé, p. 48. Annual CanFunNet Fungal Biology Conference. 4, Wolfville, Canada, 31 Mai 2023/2 Juin 2023.
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The biodiversity and farmer practices in different climate and their effect on the infestation rate of coffee berry borer. Maqsalina Marich Nur, Bagny-Beilhe Leïla, Wagianto Wagianto, Hidayat Purnama. 2023. In : Book of abstracts of the 29th conference ASIC 2023. ASIC, VAAS. Hanoï : ASIC, p. 177. ASIC Conference on Coffee Science. 29, Hanoï, Viet Nam, 11 Septembre 2023/14 Septembre 2023.
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Assessing geminiviruses prevalence in Mediterranean vegetable crops. Belabess Zineb, Mnari Hattab Monia, Anfoka Ghandi, Granier Martine, Accotto Gian Paolo, Ballardini Massimiliano, Bernardo Umberto, Davino Salvatore, Ennmily Meryem, Jerbi Nihed, Laarif Asma, Marian Daniele, Matic Slavica, Mazza Giuseppe, Miozzi Laura, Nazih Abderrahmane, Noris Emanuela, Nugnes Francesco, Taarabt Youness, Tahiri Abdessalem, Urbino Cica, Zaagueri Takoua, Peterschmitt Michel, Vaira Anna Maria. 2022. . SFV. Sète : SFV, Résumé, 1 p. International Symposium on ssDNA Viruses, Sète, France, 26 Septembre 2022/1 Octobre 2022.
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Belowground controls in coffee agroforestry systems: soil amendment regimes shape root functional expression and fungal communities. Gagliardi Stephanie, Avelino Jacques, Fulthorpe Roberta, Virginio Filho Elias de Melo, Isaac Marney E.. 2022. In : En transition vers un monde viable. Québec : Université de Laval-IUAF-ICRAF, Résumé, 1 p. Congrès mondial d'agroforesterie. 5, Québec, Canada, 17 Juillet 2022/20 Juillet 2022.
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Betasatellites associated geminivirus diseases, a risk for vegetable crops in the Mediterranean area. Anfoka Ghandi, Peterschmitt Michel, Urbino Cica. 2022. . ISHS. Angers : ISHS, Résumé, 1 p. International Horticultural Congress (IHC 2022), Angers, France, 14 Août 2022/20 Août 2022.
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Coupling plant growth models, application on pest & disease models: an interaction structure proposal. Triki Houssem, Ribeyre Fabienne, Pinard Fabrice, Jaeger Marc. 2022. . Jiangnan University, Université Paris-Saclay, Institute of Automation, Anhui Agricultural University. Wuxi : Jiangnan University, 2 p. International Symposium on Plant Growth Modeling, Simulation, Visualization, and Applications (PMA 2022). 7, Wuxi, Chine, 26 Octobre 2022/29 Octobre 2022.
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Determining the prevalence of geminiviruses in vegetable crops in the Mediterranean. Belabess Zineb, Mnari Hattab Monia, Anfoka Ghandi, Granier Martine, Accotto Gian Paolo, Altaleb Miassar, Ballardini Massimiliano, Bernardo Umberto, Davino Salvatore, Ennmily Meryem, Ahmad Fatima Haj, Jerbi Nihed, Laarif Asma, Marian Daniele, Matic Slavica, Mazza Giuseppe, Miozzi Laura, Nazih Abderrahmane, Noris Emanuela, Nugnes Francesco, Taarabt Youness, Tahiri Abdessalem, Urbino Cica, Zaagueri Takoua, Peterschmitt Michel, Vaira Anna Maria. 2022. . ISHS. Angers : ISHS, Résumé, 1 p. International Horticultural Congress (IHC 2022), Angers, France, 14 Août 2022/20 Août 2022.
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Guardian Symbionts - Disentangling the multitrophic interactions of the supervector Bemisia tabaci. Santos-Garcia Diego, Henri Hélène, Belgaidi Zainab, Urbino Cica, Peterschmitt Michel, Vavre Fabrice. 2022. . SFV. Sète : SFV, Résumé, 1 p. International Symposium on ssDNA Viruses, Sète, France, 26 Septembre 2022/1 Octobre 2022.
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Is succeeding in superinfection a characteristic of the recombinant TYLCVIS76? Urbino Cica, Jammes Margaux, Balland Julie, Blanc Stéphane, Peterschmitt Michel. 2022. . SFV. Sète : SFV, Résumé, 1 p. International Symposium on ssDNA Viruses, Sète, France, 26 Septembre 2022/1 Octobre 2022.
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Molecular determinants of the selective advantage of an invasive recombinant begomovirus in tomato plants carrying a Ty-1 resistance gene. Jammes Margaux, Golyaev Victor, Plissonneau Clémence, Urbino Cica, Peterschmitt Michel, Pooggin Mikhail. 2022. . SFV. Sète : SFV, Résumé, 1 p. International Symposium on ssDNA Viruses, Sète, France, 26 Septembre 2022/1 Octobre 2022.
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Reconstructing the emergence scenario of an invasive tomato begomovirus. Jammes Margaux, Urbino Cica, Diouf Mame Boucar, Peterschmitt Michel. 2022. . SFV. Sète : SFV, Résumé, 1 p. International Symposium on ssDNA Viruses, Sète, France, 26 Septembre 2022/1 Octobre 2022.
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Several enemies at the same time: interaction between two cocoa pod diseases and a cocoa pod borer and their impact in Peruvian agroforestry systems. Arias Monica, Alvarado Labajos Jhoner, Ramos Marcos Javier, Allinne Belloc Clémentine, Ten Hoopen Gerben Martijn, Bagny-Beilhe Leïla. 2022. . ICCO, CIRAD. Montpellier : ICCO, 9 p. International Symposium on Cocoa Research (ISCR 2022). 2, Montpellier, France, 5 Décembre 2022/7 Décembre 2022.
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Tomato yellow leaf curl virus- IS76, a textbook case of viral emergence triggered by host shift. Jammes Margaux, Urbino Cica, Pooggin Mikhail, Plissonneau Clémence, Peterschmitt Michel. 2022. . ISHS. Angers : ISHS, Résumé, 1 p. International Horticultural Congress (IHC 2022), Angers, France, 14 Août 2022/20 Août 2022.
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Transformation of coffee-growing across Latin America. Valencia Vivian, Harvey Celia A., Pritts Alyssa A., Zwetsloot Marie J., Kees Jansen, Pulleman Mirjam, Armbrecht Inge, Avelino Jacques, Barrera Juan Francisco, Bunn Christian, Hoyos García Javier, Isaza Carlos, Munoz Juana, Perez Carlos, Rahn Eric, Robiglio Valentina, Somarriba Eduardo. 2022. In : En transition vers un monde viable. Québec : Université de Laval-IUAF-ICRAF, Résumé, 1 p. Congrès mondial d'agroforesterie. 5, Québec, Canada, 17 Juillet 2022/20 Juillet 2022.
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Prévisualisation

Plant viruses go global: The European Virus Archive. Richert-Poeggeler Katja R., Accotto Gian Paolo, Candresse Thierry, Chabannes Matthieu, Desbiez Cécile, Gentit Pascal, Glasa Miroslav, Iskra Caruana Marie-Line, Jelkmann Wilhelm, Marais Armelle, Menzel Wulf, Niehl Annette, Pierro Roberto, Predajna Lukas, Romette Jean-Louis, Rubino Luisa, Verdin Eric, Urbino Cica, Ziebell Heiko, Zikeli Kerstin. 2021. . ISHS. Singapour : ISHS, 3 p. International Symposium on Virus Diseases of Ornamental Plants. 15, Singapour, Singapour, 13 Décembre 2021/17 Décembre 2021.
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Thèse

Caractérisation de déterminants biologiques et moléculaires de l'invasion d'un recombinant du Tomato yellow leaf curl virus sur des tomates résistantes Ty-1. Jammes Margaux. 2023. Montpellier : Institut Agro Montpellier, 201 p. Thèse de doctorat : Mécanismes des interactions parasitaires pathogènes et symbiotiques : Institut Agro Montpellier
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Etudes des bases génétiques de la fertilité mâle et femelle chez le champignon pathogène modèle Pyricularia oryzae. Lassagne Alexandre. 2023. Montpellier : Institut Agro Montpellier, 179 p. Thèse de doctorat : Mécanismes des interactions parasitaires pathogènes et symbiotiques : Institut Agro Montpellier
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Helminthosporiose du riz en Afrique de l'Ouest : identification des espèces responsables et diversité génétique de Bipolaris oryzae et Exserohilum rostratum. Kabore Kouka Hilaire. 2022. Gif-sur-Yvette : Université Paris-Saclay, 289 p. Thèse de doctorat : Sciences agronomiques : Université Paris-Saclay
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Biologie et génétique des populations de Pyricularia oryzae pour le contrôle de la pyriculariose du riz au Mali. Diagne Diariatou. 2021. Montpellier : Université de Montpellier, 156 p. Thèse de doctorat : Mécanismes des interactions parasitaires pathogènes et symbiotiques : Université de Montpellier
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Importance des composantes de la sécheresse sur la productivité de Theobroma cacao et moyens d'améliorer la capacité de prévision saisonnière de l'industrie. Della Sala Pietro. 2021. Montpellier : Université de Montpellier, 166 p. Thèse de doctorat : Ecologie fonctionnelle et sciences agronomiques : Université de Montpellier
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Modélisation de la dynamique d'évolution spatio-temporelle de la pourriture brune causée par Phytophthora megakarya parasite du cacaoyer (Theobroma cacao L.). Nembot Fomba Christian Gaele. 2021. Youndé : Université de Yaoundé, 216 p. Thèse de doctorat : Phytopathologie. Biotechnologies végétales : Université de Yaoundé
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Rapport d'expertise

Mission d'accompagnement et d'appui technique à la filière canne à sucre de Guyane. Grossard Fredy, Daugrois Jean-Heinrich. 2023. Montpellier : CIRAD-CTCS-Guadeloupe, 37 p.
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Protéger les cultures en augmentant la diversité végétale des espaces agricoles. Rapport de l'Expertise scientifique collective-Mai 2023. Vialatte Aude (ed.), Martinet Vincent (ed.), Tibi Anaïs (ed.), Alignier Audrey, Angeon Valérie, Bedoussac Laurent, Bohan David A., Bougherara Douadia, Carpentier Alain, Castagneyrol Bastien, Cordeau Stéphane, Courtois Pierre, Deguine Jean-Philippe, Doehler Marianne, Enjalbert Jérôme, Fabre Frédéric, Féménia Fabienne, Fréville Hélène, Goulet Frédéric, Grateau Régis, Grimonprez Benoît, Gross Nicolas, Hannachi Mourad, Jeanneret Philippe, Labarthe Pierre, Launay Marie, Lelièvre Virginie, Lemarié Stéphane, Martel Gilles, Masson Abel, Navarrete Mireille, Plantegenest Manuel, Ravigné Virginie, Rusch Adrien, Suffert Frédéric, Tapsoba A., Thoyer Sophie. 2023. Paris : INRAE, 954 p.
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Document technique et de recherche

Feuille de route des recherches du Cirad à 10 ans sur la filière Horticulture. Urbino Cica, Kahane Rémi, Delatte Hélène, Weil Mathieu, Bazile Didier, Bravin Matthieu, Bugaud Christophe, Le Bellec Fabrice, Danthu Pascal, Lejars Caroline, Akakpo Koladé, Morillon Raphaël, Micheli Fabienne, Moustier Paule, Amiot-Carlin M.J., Rabaud Stéphanie, Salinier Jérémy, Sanguin Hervé, Sourisseau Jean-Michel, Temple Ludovic, Paget Nicolas, Dury Sandrine (collab.), Côte François-Xavier (collab.). 2023. Montpellier : CIRAD, 71 p.
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Feuille de route des recherches Cirad à 10 ans sur la filière Canne à sucre. Poser Christophe, D'Hont Angélique, Goebel François-Régis, Lejars Caroline, Rott Philippe, Thuriès Laurent, Vagneron Isabelle, Volle Ghislaine. 2022. Montpellier : CIRAD, 67 p.
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Feuille de route des recherches Cirad à 10 ans sur la filière Riz. Tharreau Didier, Mendez Del Villar Patricio, Guiderdoni Emmanuel, Sester Mathilde. 2022. Montpellier : CIRAD, 48 p.
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Feuille de route des recherches du Cirad à 10 ans sur la filière Café. Bertrand Benoît, Allinne Clémentine, Avelino Jacques, Biénabe Estelle, David Guillaume, Durand Noel, Leroy Thierry, Mieulet Delphine, Rigal Clément, Vaast Philippe. 2022. Montpellier : CIRAD, 84 p.
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Feuille de route des recherches Cirad à 10 ans sur la filière Cacao. Ten Hoopen Gerben Martijn, Cilas Christian, Saj Stéphane, Argout Xavier, Boulanger Renaud, Carimentrand Aurélie, Cerdan Claire, Clément Didier, Dromard Marine, Harmand Jean-Michel, Jagoret Patrick, Muller Emmanuelle, Rapidel Bruno, De Romemont Aurelle, Rhone Bénédicte, Ribeyre Fabienne, Ruf François, Wibaux Thomas, Côte François-Xavier. 2021. Montpellier : CIRAD, 156 p.
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Typologie des connaissances publiées du Cirad sur " Une santé ". Habigand Marie, Abadie Catherine, Temple Ludovic, Allinne Clémentine, Binot Aurélie. 2021. Montpellier : CIRAD, 11 p.
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Rapport de mission

Rapport de mission au Bénin. 5 au 16 juin 2023. Silvie Pierre. 2023. Montpellier : CIRAD, 25 p.
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À la rencontre des acteurs de la transition agroécologique au Brésil. Brévault Thierry, Silvie Pierre. 2023. Montpellier : CIRAD-IRD
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Training of trainers on Antestiopsis orbitalis management in coffee plantations. David Guillaume, Cilas Christian. 2021. Montpellier : CIRAD, 8 p.
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Chapitre de rapport

Les arbres, au centre de la gestion agroécologique des bioagresseurs du caféier. Avelino Jacques, Ribeyre Fabienne, Dufour Bernard. 2022. In : Transformations agroécologiques pour des systèmes alimentaires durables. Panorama de la recherche France-CGIAR = Agroecological transformation for sustainable food systems. Insight on France-CGIAR research. Atta-Krah Kwesi (ed.), Chotte Jean-Luc (ed.), Gascuel Chantal (ed.), Gitz Vincent (ed.), Hainzelin Etienne (ed.), Quintero Marcela (ed.), Sinclair Fergus L. (ed.). Agropolis. Montpellier : Agropolis International, 55. (Les dossiers d'Agropolis International, 26)
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