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Number of items: 78.

2020

Complete genome sequence reveals evolutionary and comparative genomic features of Xanthomonas albilineans causing sugarcane leaf scald. Zhang Hui-Li, Ntambo Mbuya Sylvain, Rott Philippe, Chen Gongyou, Chen Li-Lan, Huang Mei-Ting, Gao San-Ji. 2020. Microorganisms, 8 (2):182, 16 p.
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Genomic signatures of domestication in Old World camels. Fitak Robert Rodgers, Mohandesan Elmira, Corander Jukka, Yadamsuren Adiya, Chuluunbat Battsetseg, Abdelhadi Omer M.A., Raziq Abdul, Nagy Peter, Walzer Chris, Faye Bernard, Burger Pamela A.. 2020. Communications Biology, 3 (1):316, 10 p.
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Neurospora from natural populations: Population genomics insights into the Life history of a model microbial Eukaryote. Gladieux Pierre, De Bellis Fabien, Hann-Soden Christopher, Svedberg Jesper, Johannesson Hanna, Taylor John W.. 2020. In : Statistical population genomics. Dutheil Julien Y. (ed.). Cham : Springer, pp. 313-336. (Method in Molecular Biology, 2090) ISBN 978-1-07-160199-0
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A PCR, qPCR, and LAMP toolkit for the detection of the wheat blast pathogen in seeds. Thierry Maud, Chatet Axel, Fournier Elisabeth, Tharreau Didier, Ioos Renaud. 2020. Plants, 9:227, 14 p.
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Pearl millet genomic vulnerability to climate change in West Africa highlights the need for regional collaboration. Rhone Bénédicte, Defrance Dimitri, Berthouly-Salazar Cécile, Mariac Cédric, Cubry Philippe, Couderc Marie, Dequincey Anaïs, Assoumane Aichatou, Kane Ndjido Ardo, Sultan Benjamin, Barnaud Adeline, Vigouroux Yves. 2020. Nature Communications, 11:5274, 9 p.
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Ploidy manipulation for citrus breeding, genetics and genomics. Ollitrault Patrick, Germanà Maria Antonietta, Froelicher Yann, Cuenca José, Aleza Pablo, Morillon Raphaël, Grosser Jude W., Guo Wenwu. 2020. In : The citrus genome. Gentile Alesssandra (ed.), La Malfa Stefano (ed.), Deng Ziniu (ed.). Cham : Springer, pp. 75-105. (Compendium of Plant Genomes) ISBN 978-3-030-10799-4
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Transcriptional regulation of sorghum stem composition: Key players identified through co-expression gene network and comparative genomics analyses. Hennet Lauriane, Berger Angélique, Trabanco Noemi, Ricciuti Emeline, Dufayard Jean François, Bocs Stéphanie, Bastianelli Denis, Bonnal Laurent, Roques Sandrine, Rossini Laura, Luquet Delphine, Terrier Nancy, Pot David. 2020. Frontiers in Plant Science, 11:224, 29 p.
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A genomic approach to develop a new qPCR test enabling detection of the Pyricularia oryzae lineage causing wheat blast. Thierry Maud, Gladieux Pierre, Fournier Elisabeth, Tharreau Didier, Ioos Renaud. 2020. Plant Disease, 104 (1) : pp. 60-70.
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2019

BrAPI—an application programming interface for plant breeding applications. Selby Peter, Abbeloos Rafael, Backlund Jan Erik, Basterrechea Salido Martin, Bauchet Guillaume, Benites-Alfaro Omar E., Birkett Clay, Calaminos Viana C., Carceller Pierre, Cornut Guillaume, Vasques Costa Bruno, Edwards Jeremy D., Finkers Richard, Yanxin Gao Star, Ghaffar Mehmood, Glaser Philip, Guignon Valentin, Hok Puthick, Kilian Andrzej, König Patrick, Lagare Jack Elendil B., Lange Matthias, Laporte Marie-Angélique, Larmande Pierre, LeBauer David S., Lyon David A., Marshall David S., Matthews Dave, Milne Iain, Mistry Naymesh, Morales Nicolas, Mueller Lukas, Neveu Pascal, Papoutsoglou Evangelia, Pearce Brian, Perez-Masias Ivan, Pommier Cyril, Ramírez-González Ricardo H., Rathore Abhishek, Raquel Angel Manica, Raubach Sebastian, Rife Trevor, Robbins Kelly, Rouard Mathieu, Sarma Chaitanya, Scholz Uwe, Sempere Guilhem, et al.. 2019. Bioinformatics, 35 (20) : pp. 4147-4155.
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Crop plants with improved culture and quality traits for food, feed and other uses. Nogue Fabien, Vergne Philippe, Chèvre Anne-Marie, Chauvin Jean-Eric, Bouchabke-Coussa Oumaya, Déjardin Annabelle, Chevreau Elisabeth, Hibrand-Saint Oyant Laurence, Mazier Marianne, Barret Pierre, Guiderdoni Emmanuel, Sallaud Christophe, Foucrier Séverine, Devaux Pierre, Rogowsky Peter. 2019. Transgenic Research, 28 (2), suppl. : pp. 65-73. OECD Conference on Genome Editing: Applications in Agriculture – Implications for Health, Environment and Regulation, Paris, France, 28 June 2018/29 June 2018.
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Diversity of dromedary camel coronavirus HKU23 in African camels revealed multiple recombination events among closely related betacoronaviruses of the subgenus embecovirus. So Ray T.Y., Chu Daniel K.W., Miguel Eve, Perera Ranawaka A.P.M., Oladipo Jamiu O., Fassi-Fihri Ouafaa, Aylet Gelagay, Ko Ronald L. W., Zhou Ziqi, Cheng Mo-Sheung, Kuranga Sulyman A., Roger François, Chevalier Véronique, Webby Richard J., Woo Patrick C. Y., Poon Leo L.M., Peiris Malik. 2019. Journal of Virology, 93 (23):e01236-19, 18 p.
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Evolution and ecology of plant viruses. Lefeuvre Pierre, Martin Darren Patrick, Elena Santiago F., Shepherd Dionne Natalie, Roumagnac Philippe, Varsani Arvind. 2019. Nature Reviews. Microbiology, 13 p.
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Gigwa v2—Extended and improved genotype investigator. Sempere Guilhem, Petel Adrien, Rouard Mathieu, Frouin Julien, Hueber Yann, De Bellis Fabien, Larmande Pierre. 2019. GigaScience, 8 (5), 9 p.
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Selection of trait-specific markers and multi-environment models improve genomic predictive ability in rice. Bhandari Aditi, Bartholome Jérôme, Cao-Hamadou Tuong-Vi, Kumari Nilima, Frouin Julien, Kumar Arvind, Ahmadi Nourollah. 2019. PloS One, 14 (5), e0208871, 21 p.
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Within-family genomic selection in rubber tree (Hevea brasiliensis) increases genetic gain for rubber production. Cros David, Mbo-Nkoulou Luther, Bell Joseph Martin, Oum Jean, Masson Aurélien, Soumahoro Mouman, Tran Dinh Minh, Achour Zeineb, Le Guen Vincent, Clément-Demange André. 2019. Industrial Crops and Products, 138:111464, 13 p.
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Yam genomics supports West Africa as a major cradle of crop domestication. Scarcelli Nora, Cubry Philippe, Akakpo Roland, Thuillet Anne-Céline, Obidiegwu Jude, Baco Mohamed N., Otoo Emmanuel, Sonké Bonaventure, Dansi Alexandre, Djedatin Gustave, Mariac Cédric, Couderc Marie, Causse Sandrine, Alix Karine, Chaïr Hâna, François Olivier, Vigouroux Yves. 2019. Science Advances, 5 (5):eaaw1947, 7 p.
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2018

Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps. Belser Caroline, Istace Benjamin, Denis Erwan, Dubarry Marion, Baurens Franc-Christophe, Falentin Cyril, Genete Mathieu, Berrabah Wahiba, Chèvre Anne-Marie, Delourme Régine, Deniot Gwenaëlle, Denoeud France, Duffé Philippe, Engelen Stefan, Lemainque Arnaud, Manzanares-Dauleux Maria J., Martin Guillaume, Morice Jérôme, Noël Benjamin, Vekemans Xavier, D'Hont Angélique, Rousseau-Gueutin Mathieu, Barbe Valérie, Cruaud Corinne, Wincker Patrick, Aury Jean-Marc. 2018. Nature Plants, 4 (11) : pp. 879-887.
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Genome sequence and effectorome of Moniliophthora perniciosa and Moniliophthora roreri subpopulations. Barbosa Ceslaine Santos, Da Fonseca Rute R., Batista Thiago Mafra, Barreto Mariana Araújo, Argolo Caio Suzart, de Carvalho Mariana Rocha, Do Amaral Daniel Oliveira Jordão, De Andrade Silva Edson Mario, Arévalo-Gardini Enrique, Hidalgo Karina Solis, Franco Glória Regina, Pirovani Carlos Priminho, Micheli Fabienne, Gramacho Karina Peres. 2018. BMC Genomics, 19 (509), 12 p.
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Genome-wide analysis of Corynespora cassiicola leaf fall disease putative effectors. Lopez David, Ribeiro Sébastien, Label Philippe, Fumanal Boris, Venisse Jean-Stéphane, Kohler Annegret, de Oliveira Ricardo R., Labutti Kurt, Lipzen Anna, Lail Kathleen, Bauer Diane, Ohm Robin, Barry Kerrie W., Spatafora Joseph W., Grigoriev Igor, Martin Francis, Pujade-Renaud Valérie. 2018. Frontiers in Microbiology, 9:276, 21 p.
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Genomics of the origin and evolution of Citrus. Wu Guohong Albert, Terol Javier F., Ibáñez Victoria, López-García Antonio, Pérez-Román Estela, Borredá Carles, Domingo Concha, Tadeo Francisco, Carbonell-Caballero Jose, Alonso Roberto, Curk Franck, Du Dongliang, Ollitrault Patrick, Roose Mikeal L., Dopazo Joaquin, Gmitter Frederick G., Rokhsar Daniel S., Talon Manuel. 2018. Nature, 554 (7692) : pp. 311-136.
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Liste des clones de cacaoyers spontanés de Guyane (Theobroma cacao L.) pré-sélectionnés " candidats-élites ". Annexe au dossier Cacao. Clément Didier, Lachenaud Philippe. 2018. La Lettre du Conseil Scientifique du Parc Naturel Régional de Guyane (2), 4 p.
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Nanovirus‐alphasatellite complex identi ed in Vicia cracca in the Rhône delta region of France. Gallet Romain, Kraberger Simona, Filloux Denis, Galzi Serge, Fontes Hugo, Martin Darren Patrick, Varsani Arvind, Roumagnac Philippe. 2018. Archives of Virology, 163 (3) : pp. 695-700.
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Performance of multi-trait genomic selection for Eucalyptus robusta breeding program. Rambolarimanana Herintahina, Ramamonjisoa Lolona, Verhaegen Daniel, Leong Pock Tsy Jean-Michel, Jacquin Laval, Cao-Hamadou Tuong-Vi, Makouanzi Chrissy Garel, Bouvet Jean-Marc. 2018. Tree Genetics and Genomes, 14 (5):71, 13 p.
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Recent progress in understanding three major bacterial diseases of sugarcane: gumming, leaf scald and ratoon stunting. Royer Monique, Pieretti Isabelle, Cociancich Stéphane, Rott Philippe. 2018. In : Achieving sustainable cultivation of sugarcane. Volume 2: Breeding, pests and diseases. Rott Philippe (ed.). Cambridge : Burleigh Dodds Science Publishing, pp. 311-336. ISBN 978-1-78676-148-4
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The structure and function of the global citrus rhizosphere microbiome. Xu Jin, Zhang Yunzeng, Zhang Pengfan, Trivedi Pankaj, Riera Nadia, Wang Yayu, Liu Xin, Fan Guangyi, Tang Jiliang, Coletta-Filho Helvécio D, Cubero Jaime, Deng Xiaoling, Ancona Veronica, Lu Zhanjun, Zhong Balian, Roper Caroline, Capote Nieves, Catara Vittoria, Pietersen Gerhard, Vernière Christian, Al-Sadi Abdullah M., Li Lei, Yang Fan, Xu Xun, Wang Jian, Yang Huanming, Jin Tao, Wang Nian. 2018. Nature Communications, 9:4894, 10 p.
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2017

Deciphering the Theobroma cacao self-incompatibility system: from genomics to diagnostic markers for self-compatibility. Lanaud Claire, Fouet Olivier, Legavre Thierry, Lopes Uilson Vanderlei, Sounigo Olivier, Eyango Marie Claire, Mermaz Benoit, da Silva Marcos Ramos, Loor Solorzano Rey Gaston, Argout Xavier, Gyapay Gabor, Ebaiarrey Herman Ebai, Colonges Kelly, Sanier Christine, Rivallan Ronan, Mastin Géraldine, Cryer Nicholas, Boccara Michel, Verdeil Jean-Luc, Efombagn Mousseni Ives Bruno, Peres Gramacho Karina, Clément Didier. 2017. Journal of Experimental Botany, 68 (17) : pp. 4775-4790.
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Epidémiologie moléculaire des géminivirus responsables de maladies émergentes sur les cultures maraîchères au Burkina Faso. Ouattara Alassane. 2017. Saint-Denis : Université de la Réunion, 292 p. Thèse de doctorat : Sciences : Université de la Réunion
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Experimental evaluation of faecal Escherichia coli and hepatitis E virus as biological indicators of contacts between domestic pigs and Eurasian wild boar. Barth S., Geue L., Hinsching A., Jenckel M., Schlosser J., Eiden Martin, Pietschmann J., Menge Christian, Beer Martin, Groschup Martin, Jori Ferran, Etter Eric, Blome S.. 2017. Transboundary and Emerging Diseases, 64 (2) : pp. 487-494.
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Functional genes of microorganisms, comprehending the dynamics of agricultural ecosystems. Reali Catiusca, Pilz Júnior Harry Luiz, Meile Jean-Christophe, Shorr Galindo Sabine, Fiuza Lidia Mariana. 2017. Brazilian Archives of Biology and Technology, 60:e17160370, 18 p.
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Genome sequencing of the sweetpotato whitefly Bemisia tabaci MED/Q. Xie Wen, Chen Chunhai, Yang Zezhong, Guo Litao, Yang Xin, Wang Dan, Chen Ming, Huang Jinqun, Wen Yanan, Zeng Yang, Liu Yating, Xia Jixing, Tian Lixia, Cui Hongying, Wu Qingjun, Wang Shaoli, Wu Baoyun, Li Xianchiun, Tan Xinqiu, Ghanim Murad, Qiu Baoli, Pan Huipeng, Chu Dong, Delatte Hélène, Maruthi M.N., Ge Feng, Zhou Xueping, Wang Xiaowei, Wan Fanghao, Du Yuzhou, Luo Chen, Yan Fengming, Preisser Evan L., Jiao Xiaoguo, Coates Brad S., Zhao Jinyang, Gao Qiang, Xia Jinquan, Yin Ye, Liu Yong, Brown Judith, Zhou Xuguo-Joe, Zhang Youjun. 2017. GigaScience, 6 (5), 7 p.
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Genomic preselection with genotyping-bysequencing increases performance of commercial oil palm hybrid crosses. Cros David, Bocs Stéphanie, Riou Virginie, Ortega Abboud Enrique, Tisne Sébastien, Argout Xavier, Pomies Virginie, Nodichao Leifi, Lubis Zulkifli, Cochard Benoît, Durand-Gasselin Tristan. 2017. BMC Genomics, 18:839, 17 p.
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Molecular genetics and breeding. Soh Aik Chin, Mayes Sean, Roberts Jeremy, Zaki Noorhariza Mohd, Madon Maria, Schwarzacher Trude, Heslop-Harrison Pat, Ithnin Maizura Bint, Din Amiruddin Mohd, Ramli Umi Salamah, Othman Abrizah, Zulkifli Yaakub, Low Eng Ti Leslie, Ong-Abdullah Meilina, Singh Rajinder, Teh Chee Keng, Kwong Qi Bin, Ong Ail Ling, Mohamed Mohaimi, Apparow Sukganah, Chew Fook Tim, Appleton David Ross, Kulaveerasingam Harikrishna, Teh Huey Fang, Mebus Katharina, Neoh Bee Keat, Ooi Tony Eng Keong, Wong Yick Ching, Cros David. 2017. In : Oil palm breeding : genetics and genomics. Soh Aik Chin (ed.), Mayes Sean (ed.) , Roberts Jeremy A. (ed.). Boca Raton : CRC Press, pp. 225-281. ISBN 978-1-4987-1544-7
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Occurrence of a novel mastrevirus in sugarcane germplasm collections in Florida, Guadeloupe and Réunion. Boukari Wardatou, Alcala-Briseño Ricardo I., Kraberger Simona, Fernandez Emmanuel, Filloux Denis, Daugrois Jean-Heinrich, Comstock Jack C., Lett Jean-Michel, Martin Darren Patrick, Varsani Arvind, Roumagnac Philippe, Polston Jane E., Rott Philippe. 2017. Virology Journal, 14:146, 8 p.
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QTL mapping and candidate gene analysis of ferrous iron and zinc toxicity tolerance at seedling stage in rice by genome-wide association study. Zhang Jian, Chen Kay, Pang Yunlong, Naveed Shahzad Amir, Zhao Xiuqin, Wang Xiaoqian, Wang Yun, Dingkuhn Michael, Pasuquin Julie, Li Zhikang, Xu Jianlong. 2017. BMC Genomics, 18 (1):828, 15 p.
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A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives. Sarah Gautier, Homa Félix, Pointet Stéphanie, Contreras Sandy, Sabot François, Nabholz Benoit, Santoni Sylvain, Sauné Laure, Ardisson Morgane, Chantret Nathalie, Sauvage Christopher, Tregear James, Jourda Cyril, Pot David, Vigouroux Yves, Chaïr Hâna, Scarcelli Nora, Billot Claire, Yahiaoui Nabila, Bacilieri Roberto, Khadari Bouchaib, Boccara Michel, Barnaud Adeline, Péros Jean-Pierre, Labouisse Jean-Pierre, Pham Jean Louis, David Jacques, Glemin Sylvain, Ruiz Manuel. 2017. Molecular Ecology Resources, 17 (3) : pp. 565-580.
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2016

Applications of metagenomics to fermented foods. Bigot Céline, Meile Jean-Christophe, Remize Fabienne, Strub Caroline. 2016. In : Fermented foods. Part I: biochemistry and biotechnology. Montet Didier (ed.), Ray Ramesh C. (ed.). Boca Raton : CRC Press, pp. 333-346. (Food Biology Series) ISBN 978-1-4987-4079-1
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DArT whole genome profiling provides insights on the evolution and taxonomy of edible Banana (Musa spp.). Sardos Julie, Perrier Xavier, Dolezel Jaroslav, Hribova Eva, Christelová P., Van Den Houwe Ines, Kilian Andrzej, Roux Nicolas. 2016. Annals of Botany, 118 (7) : pp. 1269-1278.
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Distribution patterns of microbial communities in ultramafic landscape: A metagenetic approach highlights the strong relationships between diversity and environmental traits. Bordez L., Jourand Philippe, Ducousso Marc, Carriconde Fabian, Cavaloc Yvon, Santini Sébastien, Claverie Jean-Michel, Wantiez L., Leveau Antoine, Amir Hamid. 2016. Molecular Ecology, 25 (10) : pp. 2258-2272.
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Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae. Islam M. Totazzal, Croll Daniel, Gladieux Pierre, Soanes Darren M., Persoons Antoine, Bhattacharjee Pallab, Hossain Md. Shaid, Gupta Dipali Rani, Rahman Md Mahbubur, Mahboob M. Golam, Cook Nicola, Salam Moin U., Surovy Musrat Zahan, Sancho Vanessa Bueno, Maciel João Leodato Nunes, NhaniJúnior Antonio, Castroagudín Vanina Lilián, de Assis Reges Juliana T., Ceresini Paulo Cezar, Ravel Sébastien, Kellner Ronny, Fournier Elisabeth, Tharreau Didier, Lebrun Marc-Henri, McDonald Bruce A., Stitt Timothy, Swan Daniel, Talbot Nicholas J., Saunders Diane G.O., Win Joe, Kamoun Sophien. 2016. BMC Biology, 14 (84), 11 p.
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Expression profiles, characterization and function of HbTCTP in rubber tree (Hevea brasiliensis). Deng Zhi, Chen Jiangshu, Leclercq Julie, Zhou Zhuangzhi, Liu Changren, Liu Hui, Yang Hong, Montoro Pascal, Xia Zhihui, Li Dejun. 2016. Frontiers in Plant Science, 7 (789), 10 p.
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Genomic and proteomic evidence supporting the division of the plant pathogen Ralstonia solanacearum into three species. Prior Philippe, Ailloud Florent, Dalsing Beth, Remenant Benoit, Sanchez Borja, Allen Caitilyn. 2016. BMC Genomics, 17 (1), 11 p.
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Le riz, une plante modèle à croquer. Cunnac Sébastien, Gantet Pascal, Ghesquière Alain, Guiderdoni Emmanuel, Trung Luu Doan. 2016. Biofutur (380) : pp. 30-34.
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Multivariate genomic model improves analysis of oil palm (Elaeis guineensis Jacq.) progeny tests. Marchal Alexandre, Legarra Andrés, Tisne Sébastien, Carasco-Lacombe Catherine, Manez Aurore, Suryana Edyana, Omoré Alphonse, Nouy Bruno, Durand-Gasselin Tristan, Sanchez Leopoldo, Bouvet Jean-Marc, Cros David. 2016. Molecular Breeding, 36 (1):2, 13 p.
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The South Green portal: A comprehensive resource for tropical and Mediterranean crop genomics. Guignon Valentin, Hueber Yann, Rouard Mathieu, Bocs Stéphanie, Couvin David, De Lamotte Frédéric, Droc Gaëtan, Dufayard Jean François, El Hassouni Nordine, Farcy Cédric, Gkanogiannis Anestis, Hamelin Chantal, Larivière Delphine, Martin Guillaume, Ortega Enrique, Pitollat Bertrand, Pointet Stéphanie, Ruiz Manuel, Gautier Sarah, Summo Marilyne, This Dominique, Ravel Sébastien, Larmande Pierre, Monat Cécile, Sabot François, Tando Ndomassi, Tranchant-Dubreuil Christine, Sempere Guilhem, Dereeper Alexis. 2016. Current Plant Biology, 7-8 : pp. 6-9.
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Using ecology, physiology, and genomics to understand host specificity in Xanthomonas. Jacques Marie Agnès, Arlat Mathieu, Boulanger Alice, Boureau Tristan, Carrère Sébastien, Cesbron Sophie, Chen Nicolas W.G., Cociancich Stéphane, Darrasse Armelle, Denancé Nicolas, Fischer-Le-Caux Marion, Gagnevin Lionel, Koebnik Ralf, Lauber Emmanuelle, Noel Laurent D., Pieretti Isabelle, Portier Perrine, Pruvost Olivier, Rieux Adrien, Robène Isabelle, Royer Monique, Szurek Boris, Verdier Valérie, Vernière Christian. 2016. Annual Review of Phytopathology, 54 : pp. 163-187.
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Whole-genome sequences of Xanthomonas euvesicatoria strains clarify taxonomy and reveal a stepwise erosion of type 3 effectors. Barak Jeri D., Vancheva Taca, Lefeuvre Pierre, Jones Jeffrey B., Timilsina Sujan, Minsavage Gerald V., Vallad Gary E., Koebnik Ralf. 2016. Frontiers in Plant Science, 7 (1805), 12 p.
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The rubber tree genome reveals new insights into rubber production and species adaptation. Tang Chaorong, Yang Meng, Fang Yongjun, Luo Yingfeng, Gao Shenghan, Xiao Xiaohu, An Zewei, Zhou Binhui, Zhang Bing, Tan Xinyu, Yeang Hoong Yeet, Qin Yunxia, Yang Jianghua, Lin Qiang, Mei Hailiang, Montoro Pascal, Long Xiangyu, Qi Jiyan, Hua Yuwei, He Zilong, Sun Min, Li Wenjie, Zeng Xia, Cheng Han, Liu Ying, Yang Jin, Tian Weimin, Zhuang Nansheng, Zeng Rizhong, Li Dejun, He Peng, Li Zhe, Zou Zhi, Li Shuangli, Li Chenji, Wang Jixiang, Wei Dong, Lai Chao-Qiang, Luo Wei, Yu Jun, Hu Songnian, Huang Huasun. 2016. Nature Plants, 10 p.
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2015

Assessment of genetic and epigenetic changes during cell culture ageing and relations with somaclonal variation in Coffea arabica. Bobadilla Landey Roberto, Cenci Alberto, Guyot Romain, Bertrand Benoît, Georget Frederic, Dechamp Eveline, Herrera Juan Carlos, Aribi Jamel, Lashermes Philippe, Etienne Hervé. 2015. Plant Cell, Tissue and Organ Culture, 122 (3) : pp. 517-531.
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Clade- and species-specific features of genome evolution in the Saccharomycetaceae. Wolfe Kenneth H., Armisén David, Proux-Wera Estelle, ÓhÉigeartaigh Seán S., Azam Haleema, Gordon Jonathan, Byrne Kevin P.. 2015. FEMS Yeast Research, 15 (5), 12 p.
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Comparative genomic analysis of Ralstonia solanacearum reveals candidate genes for host specificity. Ailloud Florent, Lowe Tiffany, Cellier Gilles, Roche David, Allen Caitilyn, Prior Philippe. 2015. BMC Genomics, 16 (270), 11 p.
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DHOEM: a statistical simulation software for simulating new markers in real SNP marker data. Jacquin Laval, Cao Tuong-Vi, Grenier Cécile, Ahmadi Nourollah. 2015. BMC Bioinformatics, 16 (404), 8 p.
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Development of a 63K SNP array for cotton and high-density mapping of intraspecific and interspecific populations of Gossypium spp. Hulse-Kemp Amanda M., Lemm Jana, Plieske Joerg, Ashrafi Hamid, Buyyarapu Ramesh, Fang David D., Frelichowski James, Giband Marc, Hague Steve, Hinze Lori L., Kochan Kelli J., Riggs Penny K., Scheffler Jodi, Udall Joshua, Ulloa Mauricio, Wang Shirley S., Zhu Qian-Hao, Bag Sumit K., Bhardwaj Archana, Burke John, Byers Robert L., Claverie Michel, Gore Michael A., Harker David B., Islam Md S., Jenkins Johnie N., Jones Don C., Lacape Jean-Marc, Llewellyn Danny, Percy Richard, Pepper Alan, Poland Jesse A., Mohan Rai Krishan, Sawant Samir V., Singh Sunil Kumar, Spriggs Andrew, Taylor Jen M., Wang Fei, Yourstone Scott M., Zheng Xiuting, Lawley Cindy T., Ganal Martin W., Van Deynze Allen, Wilson Iain W., Stelly David M.. 2015. G3 - Genes Genomes Genetics, 5 (6) : pp. 1187-1209.
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Genomic selection prediction accuracy in a perennial crop: case study of oil palm (Elaeis guineensis Jacq.). Cros David, Denis Marie, Sanchez Leopoldo, Cochard Benoît, Flori Albert, Durand-Gasselin Tristan, Nouy Bruno, Omoré Alphonse, Pomies Virginie, Riou Virginie, Suryana Edyana, Bouvet Jean-Marc. 2015. Theoretical and Applied Genetics, 128 (3) : pp. 397-410.
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Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome. Roux Brice, Bolot Stéphanie, Guy Endrick, Denancé Nicolas, Lautier Martine, Jardinaud Marie-Françoise, Fischer-Le-Caux Marion, Portier Perrine, Jacques Marie Agnès, Gagnevin Lionel, Pruvost Olivier, Lauber Emmanuelle, Arlat Mathieu, Carrère Sébastien, Koebnik Ralf, Noel Laurent D.. 2015. BMC Genomics, 16 (975), 19 p.
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Nuclear species-diagnostic SNP markers mined from 454 amplicon sequencing reveal admixture genomic structure of modern Citrus varieties. Curk Franck, Ancillo Gema, Ollitrault Frédérique, Perrier Xavier, Jacquemoud-Collet Jean-Pierre, Garcia-Lor Andrés, Navarro Luis, Ollitrault Patrick. 2015. PloS One, 10 (5):e0125628, 25 p.
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Spots on pot: Comparative genomics of two cannabis pathogens reveals insight into the evolution of Xanthomonas pathogenicity. Jacobs Jonathan M., Pesce Céline, Lefeuvre Pierre, Koebnik Ralf. 2015. Phytopathology, 105 (11S), Résumé : S4.64. 2015 APS Annual Meeting, Pasadena, États-Unis, 1 August 2015/5 August 2015.
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U6 snRNA pseudogenes: Markers of retrotransposition dynamics in mammals. Doucet Aurélien, Droc Gaëtan, Siol Olivier, Audoux Jérôme, Gilbert Nicolas. 2015. Molecular Biology and Evolution, 32 (7) : pp. 1815-1832.
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Visacane: An innovative quarantine tool for the exchange of pest and disease-free sugarcane germplasm. Guinet-Brial Isabelle, Girard Jean-Claude, Roumagnac Philippe, Daugrois Jean-Heinrich, Fernandez Emmanuel, Rott Philippe. 2015. International Sugar Journal : pp. 890-896.
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The coffee genome hub: a resource for coffee genomes. Dereeper Alexis, Bocs Stéphanie, Rouard Mathieu, Guignon Valentin, Ravel Sébastien, Tranchant-Dubreuil Christine, Poncet Valérie, Garsmeur Olivier, Lashermes Philippe, Droc Gaëtan. 2015. Nucleic Acids Research, 43 (D1), D1028-D1035
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2014

Etude des facteurs contrôlant l'efficacité de la sélection génomique chez le palmier à huile (Elaeis guineensis Jacq.). Cros David. 2014. Montpellier : Montpellier SupAgro, 204 p. Thèse de doctorat : Systèmes intégrés en biologie, agronomie, géosciences, hydrosciences, environnement (SIBAGHE). Biologie intégrative des plantes (BIP) : Montpellier SupAgro Centre international d'études supérieures en sciences agronomiques
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Placental genome and maternal-placental genetic interactions: A genome-wide and candidate gene association study of placental abruption. Denis Marie, Salazar M., Williams M.A., Enquobahrie Daniel A., Tadesse Mahlet G., Sanchez Sixto E., Ananth Cande V.. 2014. PloS One, 9 (12):e116346, 24 p.
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2013

Reference-free population genomics from next-generation transcriptome data and the vertebrate–invertebrate gap. Gayral Philippe, Melo-Ferreira José, Glemin Sylvain, Bierne Nicolas, Carneiro Miguel, Nabholz Benoit, Lourenco Joao M., Alves Paulo, Ballenghien Marion, Faivre Nicolas, Belkhir Khalid, Cahais Vincent, Loire Etienne, Bernard Aurélien, Galtier Nicolas. 2013. PLoS Genetics, 9 (4):e1003457, 15 p.
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What the genomics of arbuscular mycorrhizal symbiosis teaches us about root development. Formey Damien, Jourda Cyril, Roux Christophe, Delaux Pierre-Marc. 2013. In : Root Genomics and Soil Interactions. Crespi Martin (ed.). Oxford : Wiley-Blackwell, pp. 171-188. ISBN 978-0-4709-6043-1
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2012

Matita, a new retroelement from peanut : Characterization and evolutionary context in the light of the Arachis A-B genome divergence. Nielen Stephan, Vidigal Bruna S., Leal-Bertioli Soraya C.M., Ratnaparkhe Milind B., Paterson Andrew H., Garsmeur Olivier, D'Hont Angélique, Guimarães Patricia M., Bertioli David J.. 2012. Molecular Genetics and Genomics, 287 (1) : pp. 21-38.
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A genetic map of pineapple (Ananas comosus (L.) Merr.) including SCAR, CAPS, SSR and EST-SSR markers. Carlier Jorge Dias, Sousa Nelson Horta, Santo Tatiana Espirito, Coppens D'Eeckenbrugge Géo, Leitão José Manuel. 2012. Molecular Breeding, 29 (1) : pp. 245-260.
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2010

Clonal origin of emerging populations of Ehrlichia ruminantium in Burkina Faso. Adakal Hassane, Gavotte Laurent, Stachurski Frédéric, Konkobo Maurice, Henri Hélène, Zoungrana Sébastien, Huber Karine, Vachiery Nathalie, Martinez Dominique, Morand Serge, Frutos Roger. 2010. Infection, Genetics and Evolution, 10 (7) : pp. 903-912.
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Comparative physical maps derived from BAC end sequences of tilapia (Oreochromis niloticus). Soler Lucile, Conte Matthew A., Katagiri Takayuki, Howe Aimée E., Lee Bo-Young, Amemiya Chris, Stuart Andrew, Dossat Carole, Poulain Julie, Johnson Jeremy, Di Palma Frederica, Lindblad-Toh Kerstin, Baroiller Jean-François, D'Cotta Helena, Ozouf-Costaz Catherine, Kocher Thomas D.. 2010. BMC Genomics, 11 (636), 8 p.
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This list was generated on Mon Nov 23 06:00:08 2020 CET.