Résultats pour : "génétique des populations"

Application of near-infrared spectroscopy for fast germplasm analysis and classification in multi-environment using intact-seed peanut (Arachis hypogaea L.). Kassie Fentanesh Chekole, Chaix Gilles, Bille Ngalle Hermine, Seye Maguette, Fall Coura, Tossim Hodo-Abalo, Sambou Aissatou, Gibert Olivier, Davrieux Fabrice, Bell Joseph Martin, Rami Jean-François, Fonceka Daniel, Nguepjop Joël Romaric. 2024. Oil Crop Science, 9 (2) : 132-141.

Characterization of adaptation mechanisms in sorghum using a multireference back-cross nested association mapping design and envirotyping. Garin Vincent, Diallo Chiaka, Tekete Mohamed Lamine, Thera Mamoutou Korotimi, Guitton Baptiste, Dagno Karim, Diallo Abdoulaye, Kouressy Mamoutou, Leiser Willmar L., Rattunde Fred, Sissoko Ibrahima, Touré Aboubacar, Nébié Baloua, Samaké Moussa, Kholova Jana, Frouin Julien, Pot David, Vaksmann Michel, Weltzien Eva, Témé Niaba, Rami Jean-François. 2024. Genetics:iyae003, 17 p.

Continent-wide genomic analysis of the African buffalo (Syncerus caffer). Talenti Andrea, Wilkinson Toby, Cook Elizabeth A., Hemmink Johanneke D., Paxton Edith A., Mutinda Matthew, Ngulu Stephen D., Jayaraman Siddharth, Bishop Richard P., Obara Isaiah, Hourlier Thibaut, Garcia Giron Carlos, Martin Fergal J., Labuschagne Michel, Atimnedi Patrick, Nanteza Anne, Keyyu Julius, Mramba Furaha, Caron Alexandre, Cornelis Daniel, Chardonnet Philippe, Fyumagwa Robert, Lembo Tiziana, Auty Harriet K., Michaux Johan, Smitz Nathalie, Toye Philip, Robert Christelle, Prendergast James G.D., Morrison Liam. 2024. Communications Biology, 7:792, 14 p.

Divergence in evolutionary potential of life history traits among wild populations is predicted by differences in climatic conditions. Chantepie Stéphane, Charmantier Anne, Delahaie Boris, Adriaensen Frank, Matthysen Erik, Visser Marcel E., Alvarez Elena, Barba Emilio, Orell Markku, Sheldon Ben, Ivankina Elena, Kerimov Anvar, Lavergne Sébastien, Teplitsky Céline. 2024. Evolution Letters, 8 (1) : 29-42.

Estimation of contemporary effective population size in plant populations: Limitations of genomic datasets. Gargiulo Roberta, Decroocq Véronique, González-Martínez Santiago C., Paz-Vinas Ivan, Aury Jean-Marc, Lesur Kupin Isabelle, Plomion Christophe, Schmitt Sylvain, Scotti Ivan, Heuertz Myriam. 2024. Evolutionary Applications, 17 (5):e13691, 16 p.

Genomic evidence of genuine wild versus admixed olive populations evolving in the same natural environments in western Mediterranean Basin. Zunino Lison, Cubry Philippe, Sarah Gautier, Mournet Pierre, El Bakkali Ahmed, Aqbouch Laila, Sidibé-Bocs Stéphanie, Costes Evelyne, Khadari Bouchaib. 2024. PloS One, 19 (1):e0295043, 18 p.

Limited impact of vector control on the population genetic structure of Glossina fuscipes fuscipes from the sleeping sickness focus of Maro, Chad. Ravel Sophie, Segard Adeline, Guihini Mollo Brahim, Mahamat Hassane Hassane, Argilés-Herrero Rafael, Bouyer Jérémy, Rayaissé Jean-Baptiste, Solano Philippe, Pèka Mallaye, Darnas Justin, Belem Adrien Marie Gaston, Yoni Wilfrid, Noûs Camille, De Meeus Thierry. 2024. Parasite, 31:13, 13 p.

Screening of triploid banana population under natural and controlled black sigatoka disease for genomic selection. Mbo Nkoulou Luther Fort, Fifen Nkouandou Yacouba, Bille Ngalle Hermine, Cros David, Martin Guillaume, Molo Thierry, Ngombo Eya'a Clement, Essome Charles, Zandjanakou-Tachin Martine, Dégbey Hervé, Bell Joseph Martin, Achigan-Dako Enoch G.. 2024. Plant Disease, 108 (7) : 2006-2016.

The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars. Salojärvi Jarkko, Rambani Aditi, Yu Zhe, Guyot Romain, Strickler Susan R., Lepelley Maud, Wang Cui, Rajaraman Sitaram, Rastas Pasi, Zheng Chunfang, Santos Muñoz Daniella, Meidanis João, Rossi Paschoal Alexandre, Bawin Yves, Krabbenhoft Trevor J., Wang Zhen Qin, Fleck Steven J., Aussel Rudy, Bellanger Laurence, Charpagne Aline, Fournier Coralie, Kassam Mohamed, Lefebvre Gregory, Métairon Sylviane, Descombes Patrick, Rigoreau Michel, Stolte Jens, Hamon Perla, Couturon Emmanuel, Tranchant-Dubreuil Christine, Mukherjee Minakshi, Lan Tianying, Engelhardt Jan, Stadler Peter, De Lemos Samara Mireza Correia, Ivamoto Suzuki Suzana, Sumirat Ucu, Wai Ching Man, Dauchot Nicolas, Orozco-Arias Simon, Garavito Giovanny, Kiwuka Catherine, Musoli Pascal, Nalukenge Anne, Guichoux Erwan, Reinout Havinga, Smit Martin, Carretero-Paulet Lorenzo, Guerreiro Filho Oliveiro, Toma Braghini Masako, Padilha Lilian, Hiroshi Sera Gustavo, Ruttink Tom, Henry Robert, Marraccini Pierre, et al.. 2024. Nature Genetics, 56 : 721-731.

Bacteriocin production correlates with epidemiological prevalence of phylotype I sequevar 18 Ralstonia pseudosolanacearum in Madagascar. Rasoamanana Hasina, Ravelomanantsoa Santatra, Nomenjanahary Marie-Véronique, Gauche Miharisoa-Mirana, Prior Philippe, Guérin Fabien, Robène Isabelle, Pecrix Yann, Poussier Stéphane. 2023. Applied and Environmental Microbiology, 89 (1), 15 p.

Detecting directional and non-directional epistasis in bi-parental populations using genomic data. Rio Simon, Charcosset Alain, Moreau Laurence, Mary-Huard Tristan. 2023. Genetics, 224 (3):iyad089, 10 p.

Ethnolinguistic and genetic diversity of fonio (Digitaria exilis) in Senegal. Magatte Diop Baye, Gueye Mame Codou, Leclerc Christian, Deu Monique, Zekraoui Leïla, Calatayud Caroline, Rivallan Ronan, Kaly Justin Raymond, Cissé Momar, Piquet Marie, Diack Omar, Ngom Ablaye, Berger Angélique, Ndoye Ibrahima, Ndir Khadidiatou, Vigouroux Yves, Kane Ndjido Ardo, Barnaud Adeline, Billot Claire. 2023. Plants, People, Planet, 13 p.

Evolution of the rice blast pathogen on spatially structured rice landraces maintains multiple generalist fungal lineages. Ali Sajid, Gladieux Pierre, Ravel Sébastien, Adreit Henri, Meusnier Isabelle, Milazzo Joëlle, Cros-Arteil Sandrine, Bonnot François, Jin Baihui, Dumartinet Thomas, Charriat Florian, Lassagne Alexandre, He Xiahong, Tharreau Didier, Huang Huichuan, Morel Jean-Benoit, Fournier Elisabeth. 2023. Molecular Ecology, 32 (10), n.spéc. Evolutionary ecology of human associated microbes : 2519-2533.

First report of Bacterial leaf blight disease of rice caused by Xanthomonas oryzae pv. oryzae in Madagascar. Raveloson Harinjaka, Rabekijana Ravo, Rakotonanahary Natolotra M., Szurek Boris, Muller Bertrand, Vom Brocke Kirsten, Hutin Mathilde. 2023. Plant Disease, 107 (8) : 2510.

Genetic diversity and structure in wild and cultivated populations of an emblematic African tree species, Garcinia kola (Clusiaceae). Yogom Boniface Tientcheu, Avana-Tientcheu Marie-Louise, Monthe Franck, Bissiengou Pulcherie, Loumeto Jean Joël, Zekraoui Leïla, Hervouet Catherine, Fonkou Théophile, Mariac Cédric, Duminil Jérôme. 2023. Tree Genetics and Genomes, 19:39, 14 p.

Genetic diversity, distribution, and structure of Bemisia tabaci whitefly species in potential invasion and hybridization regions of East Africa. Ally Hadija, El Hamss Hajar, Simiand Christophe, Maruthi M.N., Colvin John, Delatte Hélène. 2023. PloS One, 18 (5):e0285967, 22 p.

Genetic structure and TALome analysis highlight a high level of diversity in burkinabe Xanthomonas Oryzae pv. oryzae populations. Diallo A., Wonni Issa, Sicard Anne, Blondin Laurence, Gagnevin Lionel, Vernière Christèle, Szurek Boris, Hutin Mathilde. 2023. Rice, 16:33, 14 p.

Genome scan of rice landrace populations collected across time revealed climate changes' selective footprints in the genes network regulating flowering time. Ahmadi Nourollah, Barry Mamadou Billo, Frouin Julien, de Navascués Miguel, Toure Mamadou Aminata. 2023. Rice, 16:15, 22 p.

Genome-wide admixture mapping identifies wild ancestry-of-origin segments in cultivated Robusta coffee. Vi Tram, Vigouroux Yves, Cubry Philippe, Marraccini Pierre, Phan Viet Ha, Khong Ngan Giang, Poncet Valérie. 2023. Genome Biology and Evolution, 15 (5):evad065, 12 p.

Genome-wide association studies reveal novel loci for resistance to groundnut rosette disease in the African core groundnut collection. Achola Esther, Wasswa Peter, Fonceka Daniel, Clevenger Josh, Bajaj Prasad, Ozias-Akins Peggy, Rami Jean-François, Deom Carl Michael, Hoisington David, Edema Richard, Odeny Damaris Achieng, Okello David K.. 2023. Theoretical and Applied Genetics, 136:35, 20 p.

Genomic analysis of two phlebotomine sand fly vectors of Leishmania from the New and Old World. Labbe Frédéric, Abdeladhim Maha, Abrudan Jenica, Araki Alejandra Saori, Araujo Ricardo N., Arensburger Peter, Benoit Joshua B., Brazil Reginaldo Pecanha, Bruno Rafaela V., Bueno da Silva Rivas Gustavo, Carvalho de Abreu Vinicius, Charamis Jason, Coutinho-Abreu Iliano V., da Costa-Latgé Samara G., Darby Alistair, Dillon Viv M., Emrich Scott J., Fernandez-Medina Daniela, Figueiredo Gontijo Nelder, Flanley Catherine M., Gatherer Derek, Genta Fernando A., Gesing Sandra, Giraldo-Calderón Gloria I., Gomes Bruno, Aguiar Eric Roberto Guimaraes Rocha, Hamilton James G. C., Hamarsheh Omar, Hawksworth Mallory, et al.. 2023. PLoS Neglected Tropical Diseases, 17 (4):e0010862, 35 p.

Geographic population structure of the honeybee microsporidian parasite Vairimorpha (Nosema) ceranae in the South West Indian Ocea. Blot Nicolas, Clémencet Johanna, Jourda Cyril, Lefeuvre Pierre, Warrit Natapot, Esnault Olivier, Delatte Hélène. 2023. Scientific Reports, 13:12122, 13 p.

Long term circulation of Sars-Cov-2 related lineages in bats in Cambodia. Ou Tey Putita, Karlsson E., Guillebaud Julia, Auerswald Heidi, Dussart Philippe, Simon-Lorière Etienne, Cappelle Julien, Duong Veasna. 2023. International Journal of Infectious Diseases, 130, suppl. 2 : S111. International Congress on Infectious Diseases (ICID KL 2022), Kuala Lumpur, Malaisie, 17 Novembre 2022/20 Novembre 2022.

Marker-assisted pyramiding of blast-resistance genes in a japonica elite rice cultivar through forward and background selection. Zampieri Elisa, Volante Andrea, Maré Caterina, Orasen Gabriele, Desiderio Francesca, Biselli Chiara, Canella Marco, Carmagnola Lorena, Milazzo Joëlle, Adreit Henri, Tharreau Didier, Poncelet Nicolas, Vaccino Patrizia, Valè Giampiero. 2023. Plants, 12 (4), n.spéc. Advances in Genetics and Breeding of Grain Crops:757, 17 p.

Molecular epidemiology of Ralstonia pseudosolanacearum phylotype I strains in the Southwest Indian Ocean Region and their relatedness to African strains. Cellier Gilles, Nordey Thibault, Cortada Laura, Gauche Mirana, Rasoamanana Hasina, Yahiaoui Noura, Rebert Emeline, Prior Philippe, Cheron Jean-Jacques, Poussier Stéphane, Pruvost Olivier. 2023. Phytopathology, 113 (3) : 423-435.

One Health compartment analysis of ESBL-producing Escherichia coli reveals multiple transmission events in a rural area of Madagascar. Gay Noellie, Rabenandrasana Mamitina Alain Noah, Panandiniaina Harielle Prisca, Rakotoninidrina Marie Florence, Ramahatafandry Ilo Tsimok'Haja, Enouf Vincent, Roger François, Collard Jean-Marc, Cardinale Eric, Rieux Adrien, Loire Etienne. 2023. Journal of Antimicrobial Chemotherapy, 78 (8) : 1848-1858.

Optimization of multi-generation multi-location genomic prediction models for recurrent genomic selection in an upland rice population. De Verdal Hugues, Baertschi Cédric, Frouin Julien, Quintero Constanza, Ospina Yolima, Alvarez María Fernanda, Cao Tuong-Vi, Bartholome Jérôme, Grenier Cécile. 2023. Rice, 16:43, 18 p.

Population genetics of Glossina fuscipes fuscipes from southern Chad. Ravel Sophie, Mahamat Mahamat Hissène, Segard Adeline, Argilés-Herrero Rafael, Bouyer Jérémy, Rayaissé Jean-Baptiste, Solano Philippe, Guihini Mollo Brahim, Pèka Mallaye, Darnas Justin, Belem Adrien Marie Gaston, Yoni Wilfrid, Noûs Camille, De Meeus Thierry. 2023. Peer Community Journal, 3:e31, 32 p.

Population improvement via recurrent selection drives genetic gain in upland rice breeding. Pereira de Castro Adriano, Breseghello Flavio, Furtini Isabela Volpi, Utumi Marley Marico, Almeida Pereira José, Cao Tuong-Vi, Bartholome Jérôme. 2023. Heredity, 131 (3) : 201-210.

Realized genetic gain in rice: Achievements from breeding programs. Seck Fallou, Covarrubias-Pazaran Giovanny, Gueye Tala, Bartholome Jérôme. 2023. Rice, 16:61, 22 p.

Revisiting the historical scenario of a disease dissemination using genetic data and Approximate Bayesian Computation methodology: The case of Pseudocercospora fijiensis invasion in Africa. Gilabert Aude, Rieux Adrien, Robert Stéphanie, Vitalis Renaud, Zapater Marie-Françoise, Abadie Catherine, Carlier Jean, Ravigné Virginie. 2023. Ecology and Evolution, 13 (4):e10013, 17 p.

Sensitivity analysis of a crop metapopulation model. Rouger Baptiste, Goldringer Isabelle, Barbillon Pierre, Miramon Anne, Naino Jika Abdel Kader, Thomas Mathieu. 2023. Ecological Modelling, 475:110174, 14 p.

Suspicions of two bridgehead invasions of Xylella fastidiosa subsp. multiplex in France. Dupas Enora, Durand Karine, Rieux Adrien, Briand Martial, Pruvost Olivier, Cunty Amandine, Denancé Nicolas, Donnadieu Cecile, Legendre Bruno, Lopez-Roques Céline, Cesbron Sophie, Ravigné Virginie, Jacques Marie Agnès. 2023. Communications Biology, 6:103, 13 p.

Traces of introgression from cAus into Tropical Japonica observed in African upland rice varieties. Beye Abdoulaye, Billot Claire, Ronfort Joëlle, McNally Kenneth L., Diouf Diaga, Glaszmann Jean-Christophe. 2023. Rice, 16 (1), 20 p.

The genetic identity of neighboring plants in intraspecific mixtures modulates disease susceptibility of both wheat and rice. Pélissier Rémi, Ballini Elsa, Temple Coline, Ducasse Aurélie, Colombo Michel, Frouin Julien, Qin Xiaoping, Huang Huichuan, Jacques David, Fort Florian, Fréville Hélène, Violle Cyrille, Morel Jean-Benoit. 2023. PLoS Biology, 21 (9):e3002287, 13 p.

The groundnut improvement network for Africa (GINA) germplasm collection: A unique genetic resource for breeding and gene discovery. Conde Soukeye, Rami Jean-François, Okello David K., Sambou Aissatou, Muitia Amade, Oteng-Frimpong Richard, Makweti Lutangu, Sako Dramane, Faye Issa, Chintu Justus, Coulibaly Adama M., Miningou Amos, Asibuo James Y., Konaté A., Banla Essohouna M., Seye Maguette, Djiboune Yvette Rachelle, Tossim Hodo-Abalo, Sylla Samba, Hoisington David, Clevenger Josh, Chu Ye, Tallury Shyam, Ozias-Akins Peggy, Foncéka Daniel. 2023. G3 - Genes Genomes Genetics, 14 (1):jkad244, 12 p.

A minisatellite-based MLVA for deciphering the global epidemiology of the bacterial cassava pathogen Xanthomonas phaseoli pv. manihotis. Rache Leidy, Blondin Laurence, Diaz Tatis Paula, Flores Carolina, Camargo Andrea, Kanté Moussa, Wonni Issa, López Camilo, Szurek Boris, Dupas Stéphane, Pruvost Olivier, Koebnik Ralf, Restrepo Silvia, Bernal Adriana Jimena, Vernière Christian. 2023. PloS One, 18 (5):e0285491, 16 p.

An overview of mapping quantitative trait loci in peanut (Arachis hypogaea L.). Kassie Fentanesh Chekole, Nguepjop Joël Romaric, Ngalle Bille Hermine, Assaha Dekoum V. M., Gessese Mesfin K., Abtew Wosene Gebreselassie, Tossim Hodo-Abalo, Sambou Aissatou, Seye Maguette, Rami Jean-François, Fonceka Daniel, Bell Joseph Martin. 2023. Genes, 14 (6), n.spéc. Peanut Genetics and Omics:1176, 23 p.

Collection of native Theobroma cacao L. accessions from the Ecuadorian Amazon highlights a hotspot of cocoa diversity. Fouet Olivier, Loor Rey Gaston, Rhone Bénédicte, Subia Cristian, Calderón Darío, Fernández Fabián, Sotomayor Ignacio, Rivallan Ronan, Colonges Kelly, Vignes Hélène, Angamarca Freddy, Yaguana Byron, Costet Pierre, Argout Xavier, Lanaud Claire. 2022. Plants, People, Planet, 4 (6) : 605-617.

EggLib 3: A python package for population genetics and genomics. Siol Mathieu, Coudoux Thomas, Ravel Sébastien, De Mita Stéphane. 2022. Molecular Ecology Resources, 22 (8) : 3176-3187.

Genetic studies of fall armyworm indicate a new introduction into Africa and identify limits to its migratory behavior. Nagoshi Rodney N., Goergen Georg, Koffi Djima, Agboka Komi, Mawuko Adjevi Anani Kossi, Du Plessis Hannalene, Van den Berg Johnnie, Tepa-Yotto Ghislain T., Winsou Jeannette K., Meagher Jr. Robert L., Brévault Thierry. 2022. Scientific Reports, 12:1941, 12 p.

Genome properties of key oil palm (Elaeis guineensis Jacq.) breeding populations. Seyum Essubalew Getachew, Ngalle Bille Hermine, Abtew Wosene Gebreselassie, Rastas Pasi, Arifianto Deni, Domonhedo Hubert, Cochard Benoît, Jacob Florence, Riou Virginie, Pomies Virginie, Lopez David, Bell Joseph Martin, Cros David. 2022. Journal of Applied Genetics, 63 : 633-650.

Genome-wide analysis of hybridization in wild boar populations reveals adaptive introgression from domestic pig. Mary Nicolas, Iannuccelli Nathalie, Petit Geoffrey, Bonnet Nathalie, Pinton Alain, Barasc Harmonie, Faure Amélie, Calgaro Anne, Grosbois Vladimir, Servin Bertrand, Ducos Alain, Riquet Juliette. 2022. Evolutionary Applications, 15 (7) : 1115-1128.

Hybridization, missing wild ancestors and the domestication of cultivated diploid bananas. Sardos Julie, Breton Catherine, Perrier Xavier, Van Den Houwe Ines, Carpentier Sébastien Christian, Paofa Janet, Rouard Mathieu, Roux Nicolas. 2022. Frontiers in Plant Science, 13:969220, 17 p.

Incipient speciation between host-plant strains in the fall armyworm. Durand Karine, Yainna Kumarihami Sudeeptha, Nam Kiwoong. 2022. BMC Ecology and Evolution, 22 (1), 8 p.

Khaya revisited: Genetic markers and morphological analysis reveal six species in the widespread taxon K. anthotheca. Bouka-Dipelet Ulrich Gaël, Doumenge Charles, Ekué Marius Rodrigue Mensah, Daïnou Kasso, Florence Jacques, Degen Bernd, Loumeto Jean Joël, McKey Doyle B., Hardy Olivier J.. 2022. Taxon, 71 (4) : 814-832.

One Health compartmental analysis of ESBL-producing Escherichia coli on Reunion Island reveals partitioning between humans and livestock. Miltgen Guillaume, Martak Daniel, Valot Benoît, Kamus Laure, Garrigos Thomas, Verchere Guillaume, Gbaguidi-Haore Houssein, Ben Cimon Céline, Ramiandrisoa Mahery, Picot Sandrine, Lignereux Anne, Masson Geoffrey, Jaffar-Bandjee Marie-Christine, Belmonte Olivier, Cardinale Eric, Hocquet Didier, Mavingui Patrick, Bertrand Xavier. 2022. Journal of Antimicrobial Chemotherapy, 77 (5) : 1254-1262.

Searching for genetic evidence of demographic decline in an arctic seabird: Beware of overlapping generations. Charbonnel Emeline, Daguin-Thiébaut Claire, Caradec Lucille, Moittié Eléonore, Gilg Olivier, Gavrilo Maria V., Strom Hallvard, Mallory Mark L., Morrison R. I. Guy, Gilchrist Grant, Leblois Raphaël, Roux Camille, Yearsley Jonathan M., Yannic Glenn, Broquet Thomas. 2022. Heredity, 128 (5) : 364-376.

The genetic history of Mayotte and Madagascar cattle breeds mirrors the complex pattern of human exchanges in Western Indian Ocean. Magnier Jessica, Druet Tom, Naves Michel, Ouvrard Mélissa, Raoul Solène, Janelle Jérôme, Moazami-Goudarzi Katayoun, Lesnoff Matthieu, Tillard Emmanuel, Gautier Mathieu, Flori Laurence. 2022. G3 - Genes Genomes Genetics, 12 (4):jkac029, 14 p.

Biologie et génétique des populations de Pyricularia oryzae pour le contrôle de la pyriculariose du riz au Mali. Diagne Diariatou. 2021. Montpellier : Université de Montpellier, 156 p. Thèse de doctorat : Mécanismes des interactions parasitaires pathogènes et symbiotiques : Université de Montpellier

Breeding for nitrogen use efficiency: Lessons from genomic prediction experiments based on a broad-based population of upland rice. Rakotomalala Joël, Vom Brocke Kirsten, Frouin Julien, Pot David, Rabekijana Ravonantenaina Rhodia, Ramanantsoanirina Alain, Ratsimiala Ramonta Isabelle, Cao Tuong-Vi. 2021. Rice Research: Open Access, 9 (9):1000264, 26 p.

Central American and Caribbean population history of the Pseudocercospora fijiensis fungus responsible for the latest worldwide pandemics on banana. Carlier Jean, Robert Stéphanie, Roussel Véronique, Chilin-Charles Yolande, Lubin Adjanoh Nadia, Gilabert Aude, Abadie Catherine. 2021. Fungal Genetics and Biology, 148:103528, 10 p.

DILS: Demographic inferences with linked selection by using ABC. Fraïsse Christelle, Popovic Iva, Mazoyer Clément, Spataro Bruno, Delmotte Stéphane, Romiguier Jonathan, Loire Etienne, Simon Alexis, Galtier Nicolas, Duret Laurent, Bierne Nicolas, Vekemans Xavier, Roux Camille. 2021. Molecular Ecology Resources, 21 (8), n.spéc. : 2629-2644.

Diversification, selective sweep, and body size in the invasive Palearctic alfalfa weevil infected with Wolbachia. Tuda Midori, Iwase Shun‑ichiro, Kébé Khadim, Haran Julien, Skuhrovec Jiri, Sanaei Ehsan, Tsuji Naomichi, Podlussány Attila, Merkl Ottó, El‑Heneid Ahmed H., Morimoto Katsura. 2021. Scientific Reports, 11:9664, 14 p.

Genetic diversity and population structure analyses of wild relatives and cultivated cowpea (Vigna unguiculata (l.) Walp.) from Senegal using simple sequence repeat markers. Sarr Awa, Bodian Amy, Mawuena Gbedevi Kodjo, Ndoye Ndir Khadidiatou, Olaniyi Ajewole Oyatomi, Gueye Badara, Foncéka Daniel, Diop Elisabeth, Magatte Diop Baye, Cissé Ndiaga, Diouf Diaga. 2021. Plant Molecular Biology Reporter, 39 : 112-124.

Global range expansion history of pepper (Capsicum spp.) revealed by over 10,000 genebank accessions. Tripodi Pasquale, Rabanus-Wallace Mark Timothy, Barchi Lorenzo, Kale Sandip, Esposito Salvatore, Acquadro Alberto, Schafleitner Roland, Van Zonneveld Maarten, Prohens Jaime, Diez Maria José, Börner Andreas, Salinier Jérémy, Caromel Bernard, Bovy Arnaud, Boyaci Filiz, Pasev Gancho, Brandt Ronny, Himmelbach Axel, Portis Ezio, Finkers Richard, Lanteri Sergio, Paran Ilan, Lefebvre Véronique, Giuliano Giovanni, Stein Nils. 2021. Proceedings of the National Academy of Sciences of the United States of America, 118 (34):e2104315118, 9 p.

Identification of an elite core panel as a key breeding resource to accelerate the rate of genetic improvement for irrigated rice. Juma Roselyne Uside, Bartholome Jérôme, Thathapalli Prakash Parthiban, Hussain Waseem, Platten John Damien, Lopena Vitaliano, Verdeprado Holden, Murori Rosemary, Ndayiragije Alexis, Kumar Katiyar Sanjay, Islam M. Rafiqul, Biswas Partha S., Rutkoski Jessica, Arbelaez Juan David, Mbute Felister N., Miano Douglas W., Cobb Joshua N.. 2021. Rice, 14 (1):92, 22 p.

Kinship networks of seed exchange shape spatial patterns of plant virus diversity. Delêtre Marc, Lett Jean-Michel, Sulpice Ronan, Spillane Charles. 2021. Nature Communications, 12 (1), 10 p.

Topography drives microgeographic adaptations of closely related species in two tropical tree species complexes. Schmitt Sylvain, Tysklind Niklas, Herault Bruno, Heuertz Myriam. 2021. Molecular Ecology, 30 (20) : 5080-5093.

A novel motif in the 5'-UTR of an orphan gene 'Big Root Biomass' modulates root biomass in sesame. Dossa Komivi, Zhou Rong, Li Donghua, Liu Aili, Qin Liu, Mmadi Marie Ali, Su Ruqi, Zhang Yujuan, Wang Jiankang, Gao Yuan, Zhang Xiurong, You Jun. 2021. Plant Biotechnology Journal, 19 (5) : 1065-1079.

Contrasting genetic diversity and structure among Malagasy Ralstonia pseudosolanacearum phylotype I populations inferred from an optimized Multilocus Variable Number of Tandem Repeat Analysis scheme. Rasoamanana Hasina, Ravelomanantsoa Santatra, Yahiaoui Noura, Dianzinga Niry Tiana, Rebert Emeline, Gauche Miharisoa-Mirana, Pecrix Yann, Costet Laurent, Rieux Adrien, Prior Philippe, Robene Isabelle, Cellier Gilles, Guérin Fabien, Poussier Stéphane. 2020. PloS One, 15 (12):e0242846, 22 p.

Distribution and genetic diversity of five invasive pests of Eucalyptus in sub-Saharan Africa. Wondafrash Mesfin, Slippers Bernard, Nambazimana Alphonsine, Kayumba Isaac, Nibouche Samuel, van der Lingen Simon, Asfaw Birhane A., Jenya Herbert, Mutitu Eston K., Makowe Idea A., Chungu Donald, Kiwuso Peter, Kulimushi Emmanuel, Razafindrakotomamonjy Abdrianantenaina, Bosu Paul P., Sookar Preeaduth, Hurley Brett P.. 2020. Biological Invasions, 22 : 2205-2221.

Genomic acquisitions in emerging populations of Xanthomonas vasicola pv. vasculorum infecting corn in the United States and Argentina. Pérez-Quintero Alvaro L., Ortiz-Castro Mary, Lang Jillian M., Rieux Adrien, Wu Guangxi, Liu Sanzhen, Chapman Toni A., Chang Christine, Ziegle Janet, Peng Zhao, White Frank F., Plazas Maria Cristina, Leach Jan E., Broders Kirk. 2020. Phytopathology, 110 (6) : 1161-1173.

Neurospora from natural populations: Population genomics insights into the Life history of a model microbial Eukaryote. Gladieux Pierre, De Bellis Fabien, Hann-Soden Christopher, Svedberg Jesper, Johannesson Hanna, Taylor John W.. 2020. In : Statistical population genomics. Dutheil Julien Y. (ed.). Cham : Springer, 313-336. (Method in Molecular Biology, 2090) ISBN 978-1-07-160199-0

New insights on spatial genetic structure and diversity of Coffea canephora (Rubiaceae) in Upper Guinea based on old herbaria. Labouisse Jean-Pierre, Cubry Philippe, Austerlitz Frédéric, Rivallan Ronan, Nguyen Hong Anh. 2020. Plant Ecology and Evolution, 153 (1) : 82-100.

Pattern of local adaptation to quantitative host resistance in a major pathogen of a perennial crop. Dumartinet Thomas, Abadie Catherine, Bonnot François, Carreel Françoise, Roussel Véronique, Habas Rémy, Martinez Reina Teresa, Perez-Vicente Luis, Carlier Jean. 2020. Evolutionary Applications, 13 (4) : 824-836.

The hyperdominant tropical tree Eschweilera coriacea (Lecythidaceae) shows higher genetic heterogeneity than sympatric Eschweilera species in French Guiana. Heuertz Myriam, Caron Henri, Scotti-Saintagne Caroline, Petronelli Pascal, Engel Julien, Tysklind Niklas, Miloudi Sana, Gaiotto Fernanda Amato, Chave Jérôme, Molino Jean-François, Sabatier Daniel, Loureiro João, Budde Katharina B.. 2020. Plant Ecology and Evolution, 153 (1) : 67-81.

Diagnostic et inférence de l'histoire évolutive des lignées endémiques et pandémiques de Pyricularia oryzae causant la pyriculariose du riz, du blé, et d'autres Poacées sauvages. Thierry Maud. 2019. Montpellier : Montpellier SupAgro, 180 p. Thèse de doctorat : Mécanismes des interactions parasitaires pathogènes et symbiotiques : Montpellier SupAgro

Genetic structure of a European forest species, the edible dormouse (Glis glis): A consequence of past anthropogenic forest fragmentation? Michaux Johan, Hürner H., Krystufek B., Sarà M., Ribas A., Ruch T., Vekhnik V., Renaud S.. 2019. Biological Journal of the Linnean Society, 126 (4) : 836-851.

Patterns and drivers of genetic diversity and structure in the biological control parasitoid Habrobracon hebetor in Niger. Garba Madougou, Loiseau Anne, Tatard Caroline, Benoit Laure, Gauthier Nathalie. 2019. Bulletin of Entomological Research, 109 (6) : 794-811.

Plasmodium vivax malaria viewed through the lens of an eradicated european strain. van Dorp Lucy, Gelabert Pere, Rieux Adrien, de Manuel Marc, de-Dios Toni, Gopalakrishnan Shyam, Caroe christian, Sandoval-Velasco Marcela, Fregel Rosa, Olalde Iñigo, Escosa Raül, Aranda Carles, Huijben Silvie, Mueller Ivo, Marquès-Bonet Tomàs, Balloux François, Gilbert M. Thomas P., Lalueza-Fox Carles. 2019. Molecular Biology and Evolution, 37 (3) : 773-785.

The complex genetic architecture of shoot growth natural variation in Arabidopsis thaliana. Hanemian Mathieu, Marchadier Elodie, Tisne Sébastien, Bach Liên, Bazakos Christos, Gilbault Elodie, Haddadi Parham, Virlouvet Laetitia, Loudet Olivier. 2019. PLoS Genetics, 15 (4):e1007954, 17 p.

Autosomal and mitochondrial adaptation following admixture: a case study on the honeybees of Reunion Island. Wragg David, Techer Maéva Angélique, Canale-Tabet Kamila, Basso Benjamin, Bidanel Jean-Pierre, Labarthe Emmanuelle, Bouchez Olivier, Le Conte Yves, Clémencet Johanna, Delatte Hélène, Vignal Alain. 2018. Genome Biology and Evolution, 10 (1) : 220-238.

Circulation of Alphacoronavirus, Betacoronavirus and Paramyxovirus in Hipposideros bat species in Zimbabwe. Bourgarel Mathieu, Pfukenyi Davies Mubika, Boué Vanina, Talignani Loïc, Chiweshe Ngoni, Diop Fodé, Caron Alexandre, Matope Gift, Missé Dorothée, Liégeois Florian. 2018. Infection, Genetics and Evolution, 58 : 253-257.

Evolution of almond genetic diversity and farmer practices in Lebanon: Impacts of the diffusion of a graft-propagated cultivar in a traditional system based on seed-propagation. Hamadeh Bariaa, Chalak Lamis, Coppens D'Eeckenbrugge Geo, Benoit Laure, Joly Hélène. 2018. BMC Plant Biology, 18:155, 18 p.

Experimental demonstration of the impact of hard and soft selection regimes on polymorphism maintenance in spatially heterogeneous environments. Gallet Romain, Froissart Rémi, Ravigné Virginie. 2018. Evolution, 72 (8) : 1677-1688.

Faecal Escherichia coli as biological indicator of spatial interaction between domestic pigs and wild boar (Sus scrofa) in Corsica. Barth S., Blome S., Cornélis Daniel, Pietschmann J., Laval M., Maestrini Oscar, Geue L., Charrier François, Etter Eric, Menge Christian, Beer Martin, Jori Ferran. 2018. Transboundary and Emerging Diseases, 65 (3) : 746-757.

Genomics of the origin and evolution of Citrus. Wu Guohong Albert, Terol Javier F., Ibáñez Victoria, López-García Antonio, Pérez-Román Estela, Borredá Carles, Domingo Concha, Tadeo Francisco, Carbonell-Caballero Jose, Alonso Roberto, Curk Franck, Du Dongliang, Ollitrault Patrick, Roose Mikeal L., Dopazo Joaquin, Gmitter Frederick G., Rokhsar Daniel S., Talon Manuel. 2018. Nature, 554 (7692) : 311-136.

Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. Bernardo Pauline, Charles-Dominique Tristan, Barakat Mohamed, Ortet Philippe, Fernandez Emmanuel, Filloux Denis, Hartnady Penelope, Rebelo Tony A., Cousins Stephen, Mesleard François, Cohez Damien, Yaverkovski Nicole, Varsani Arvind, Harkins Gordon William, Peterschmitt Michel, Malmstrom Carolyn, Martin Darren Patrick, Roumagnac Philippe. 2018. ISME Journal, 12 : 174-184.

The Guiana cacao genetic group (Theobroma cacao L.): A new core collection in French Guiana. Lachenaud Philippe, Clément Didier, Argout Xavier, Scalabrin Simone, Doare Fabien. 2018. Botany Letters, 165 (2) : 248-254.

Identification of a hypervirulent pathotype of Rice yellow mottle virus: A Threat to genetic resistance deployment in West-Central Africa. Hebrard Eugénie, Pinel-Galzi Agnès, Oludare Aderonke, Poulicard Nils, Aribi Jamel, Fabre Sandrine, Issaka Souley, Mariac Cédric, Dereeper Alexis, Albar Laurence, Silué Drissa, Fargette Denis. 2018. Phytopathology, 108 (2) : 299-307.

Integrating genetic analysis and crop modeling: A major QTL can finely adjust photoperiod-sensitive sorghum flowering. Guitton Baptiste, Thera Korotimi, Tekete Mohamed, Pot David, Kouressy Mamoutou, Témé Niaba, Rami Jean-François, Vaksmann Michel. 2018. Field Crops Research, 221 : 7-18.

Le genre Entandrophragma (Meliaceae) : taxonomie et écologie d'arbres africains d'intérêt économique (synthèse bibliographique). Kasongo Yakusu Emmanuel, Monthe Franck, Bourland Nils, Hardy Olivier J., Louppe Dominique, Bola Mbele Lokanda Félicien, Hubau Wannes, Kahindo Muhongya Jean-Marie, Van den Bulcke Jan, Van Acker Joris, Beeckman Hans. 2018. Biotechnologie, Agronomie, Société et Environnement, 22 (2) : 113-127.

MERS coronaviruses from camels in Africa exhibit region-dependent genetic diversity. Chu Daniel K.W., Hui Kenrie P.Y., Perera Ranawaka A.P.M., Miguel Eve, Niemeyer Daniela, Zhao Jincun, Channappanavar Rudragouda, Dudas Gytis, Oladipo Jamiu O., Traoré Amadou, Fassi-Fihri Ouafaa, Ali Abraham, Demissie Getnet Fekadu, Muth Doreen, Chan Michael C.W., Nicholls John M., Meyerholz David K., Kuranga Sulyman A., Mamo Gezahegne, Zhou Ziqi, So Ray T.Y., Hemida Maged G., Webby Richard J., Roger François, Rambaut Andrew, Poon Leo L.M., Perlman Stanley, Drosten Christian, Chevalier Véronique, Peiris Malik. 2018. Proceedings of the National Academy of Sciences of the United States of America, 115 (12) : 3144-3149.

Molecular epidemiology of bacterial wilt in the Madagascar highlands caused by Andean (Phylotype IIB-1) and African (Phylotype III) brown rot strains of the Ralstonia solanacearum species complex. Ravelomanantsoa Santatra, Vernière Christian, Rieux Adrien, Costet Laurent, Chiroleu Frédéric, Arribat Sandrine, Cellier Gilles, Pruvost Olivier, Poussier Stéphane, Robène Isabelle, Guérin Fabien, Prior Philippe. 2018. Frontiers in Plant Science, 8:2258, 17 p.

Sequevar diversity and virulence of Ralstonia solanacearum phylotype I on Mayotte Island (Indian Ocean). Chesneau Thomas, Maignien Géraldine, Boyer Claudine, Cheron Jean-Jacques, Roux Cuvelier Michel, Vanhuffel Luc, Poussier Stéphane, Prior Philippe. 2018. Frontiers in Plant Science, 8:2209, 10 p.

Training genomic selection models across several breeding cycles increases genetic gain in oil palm in silico study. Cros David, Tchounke Billy, Nkague-Nkamba Léontine. 2018. Molecular Breeding, 38:89, 12 p.

Analyse des déterminants génétiques contrôlant la production et la composition de la tige chez le sorgho (Sorghum bicolor [L.] Moench). Intégration des approches bi-et multi-parentales. Thera Korotimi. 2017. Montpellier : Montpellier SupAgro, 245 p. Thèse de doctorat : Sciences agronomiques et écologie : Montpellier SupAgro

Assessment of genetic diversity among cultivated Pearl millet (Pennisetum glaucum, Poaceae) accessions from Benin, West Africa. Adeoti Adéola Zouri-Kifouli, Djedatin Gustave, Ewedje Ebenezer, Beulé Thierry, Santoni Sylvain, Rival Alain, Jaligot Estelle. 2017. African Journal of Biotechnology, 16 (15) : 782-790.

Comparative analysis of core collection sampling methods for mandarin germplasm based on molecular and phenotypic data. Garcia-Lor Andrés, Luro François, Ollitrault Patrick, Navarro Luis. 2017. Annals of Applied Biology, 171 (3) : 327-339.

Comparative genomics of the zoonotic pathogen Ehrlichia chaffeensis reveals candidate type IV effectors and putative host cell targets. Noroy Christophe, Meyer Damien. 2017. Frontiers in Cellular and Infection Microbiology, 6 (204), 15 p.

Comparison of different genetic distances to test isolation by distance between populations. Sere Modou, Thevenon Sophie, Belem Adrien Marie Gaston, De Meeus Thierry. 2017. Heredity, 119 : 55-63.

The Criollo cacao tree (Theobroma cacao L.): A review. Lachenaud Philippe, Motamayor Juan Carlos. 2017. Genetic Resources and Crop Evolution, 64 (8) : 1807-1820.

Day-to-day dynamics of commensal Escherichia coli in Zimbabwean cows evidence temporal fluctuations within a host-specific population structure. Massot Méril, Couffignal Camille, Clermont Olivier, D'Humières Camille, Chatel Jérémie, Plault Nicolas, Andremont Antoine, Caron Alexandre, Mentré France, Denamur Erick. 2017. Applied and Environmental Microbiology, 83 (13):e00659, 17 p.

Deciphering the routes of invasion of Drosophila suzukii by means of ABC random forest. Fraimout Antoine, Debat Vincent, Fellous Simon, Hufbauer Ruth A., Foucaud Julien, Pudlo Pierre, Marin Jean-Michel, Price Donald K., Cattel Julien, Chen Xiao, Deprá Marindia, Duyck Pierre François, Guedot Christelle, Kenis Marc, Kimura Masahito T., Loeb Gregory, Loiseau Anne, Martinez-Sañudo Isabel, Pascual Marta, Richmond Maxi Polihronaki, Shearer Peter, Singh Nadia, Tamura Koichiro, Xuereb Anne, Zhang Jinping, Estoup Arnaud. 2017. Molecular Biology and Evolution, 34 (4) : 980-996.

Diversity analysis of cotton (Gossypium hirsutum L.) germplasm using the CottonSNP63K Array. Hinze Lori L., Hulse-Kemp Amanda M., Wilson Lain W., Zhu Qian-Hao, Llewellyn Danny, Taylor Jen M., Spriggs Andrew, Fang David D., Ulloa Mauricio, Burke John, Giband Marc, Lacape Jean-Marc, Van Deynze Allen, Udall Joshua, Scheffler Jodi, Hague Steve, Wendel Jonathan F., Pepper Alan, Frelichowski James, Lawley Cindy T., Jones Don C., Percy Richard, Stelly David M.. 2017. BMC Plant Biology, 17:37, 20 p.

Diversity of bat astroviruses in Lao PDR and Cambodia. Lacroix Audrey, Duong Veasna, Hul Vibol, Sorn San, Davun Hull, Omaliss Keo, Chea Sokha, Hassanin Alexandre, Theppangna Watthana, Silithammavong Soubanh, Khammavong Kongsy, Singhalath Sinpakone, Afelt Aneta, Greatorex Zoe, Fine Amanda Elizabeth, Goldstein Tracey, Olson Sarah, Joly Damien O., Keatts Lucy, Dussart Philippe, Frutos Roger, Buchy Philippe. 2017. Infection, Genetics and Evolution, 47 : 41-50.

Domestication reduces alternative splicing expression variations in sorghum. Ranwez Vincent, Serra Audrey, Pot David, Chantret Nathalie. 2017. PloS One, 12 (9):e0183454, 20 p.

Domestication rewired gene expression and nucleotide diversity patterns in tomato. Sauvage Christopher, Rau Andrea, Aichholz Charlotte, Chadoeuf Joël, Sarah Gautier, Ruiz Manuel, Santoni Sylvain, Causse Mathilde, David Jacques, Glemin Sylvain. 2017. Plant Journal, 91 (4) : 631-645.

Epidémiologie moléculaire des géminivirus responsables de maladies émergentes sur les cultures maraîchères au Burkina Faso. Ouattara Alassane. 2017. Saint-Denis : Université de la Réunion, 292 p. Thèse de doctorat : Sciences : Université de la Réunion

Evolutionary forces affecting synonymous variations in plant genomes. Clément Yves, Sarah Gautier, Holtz Yan, Homa Félix, Pointet Stéphanie, Contreras Sandy, Nabholz Benoit, Sabot François, Sauné Laure, Ardisson Morgane, Bacilieri Roberto, Besnard Guillaume, Berger Angélique, Cardi Céline, De Bellis Fabien, Fouet Olivier, Jourda Cyril, Khadari Bouchaib, Lanaud Claire, Leroy Thierry, Pot David, Sauvage Christopher, Scarcelli Nora, Tregear James, Vigouroux Yves, Yahiaoui Nabila, Ruiz Manuel, Santoni Sylvain, Labouisse Jean-Pierre, Pham Jean Louis, David Jacques, Glemin Sylvain. 2017. PLoS Genetics, 13 (5):e1006799, 28 p.

Experimental evaluation of faecal Escherichia coli and hepatitis E virus as biological indicators of contacts between domestic pigs and Eurasian wild boar. Barth S., Geue L., Hinsching A., Jenckel M., Schlosser J., Eiden Martin, Pietschmann J., Menge Christian, Beer Martin, Groschup Martin, Jori Ferran, Etter Eric, Blome S.. 2017. Transboundary and Emerging Diseases, 64 (2) : 487-494.

Exploring the relationship between tychoparthenogenesis and inbreeding depression in the Desert Locust, Schistocerca gregaria. Little Chelsea, Chapuis Marie-Pierre, Blondin Laurence, Chapuis Elodie, Jourdan Hélène. 2017. Ecology and Evolution, 7 (15) : 6003-6011.

Fall armyworm migration across the Lesser Antilles and the potential for genetic exchanges between North and South American populations. Nagoshi Rodney N., Fleischer Shelby, Meagher Robert L., Hay-Roe Mirian, Khan Ayub, Murúa M. Gabirela, Silvie Pierre, Vergara Clorinda, Westbrook John. 2017. PloS One, 12 (2):e0171743, 18 p.

Fine mapping of Pi57 conferring broad spectrum resistance against Magnaporthe oryzae in introgression line IL-E1454 derived from Oryza longistaminata. Dong Liying, Liu Shuguang, Xu Peng, Deng Wei, Li Xundong, Tharreau Didier, Li Jing, Zhou Jiawu, Wang Qun, Tao Dayun, Yang Qinzhong. 2017. PloS One, 12 (10):e0186201, 11 p.

First record of Stegomyia albopicta (=Aedes albopictus) in Morocco: A major threat to public health in North Africa? Bennouna Amal, Balenghien Thomas, El Rhaffouli Hicham, Schaffner Francis, Garros Claire, Gardes Laëtitia, Lhor Youssef, Hammoumi Saliha, Chlyeh Ghita, Fassi Fihri Ouafaa. 2017. Medical and Veterinary Entomology, 31 (1) : 102-106.

Functional genes of microorganisms, comprehending the dynamics of agricultural ecosystems. Reali Catiusca, Pilz Júnior Harry Luiz, Meile Jean-Christophe, Shorr Galindo Sabine, Fiuza Lidia Mariana. 2017. Brazilian Archives of Biology and Technology, 60:e17160370, 18 p.

Genetic and morphological variation in non-polyphenic southern African populations of the Desert locust. Chapuis Marie-Pierre, Foucart Antoine, Plantamp Christophe, Blondin Laurence, Leménager Nicolas, Benoit Laure, Gay Pierre-Emmanuel, Bazelet Corinna S.. 2017. African Entomology, 25 (1) : 13-23.

Genetic diversity and differentiation among insular honey bee populations in the southwest Indian Ocean likely reflect old geographical isolation and modern introductions. Techer Maéva Angélique, Clémencet Johanna, Simiand Christophe, Turpin Patrick, Garnery Lionel, Reynaud Bernard, Delatte Hélène. 2017. PloS One, 12 (12):e0189234, 26 p.

Genetic diversity of Bemisia tabaci species colonizing cassava in Central African Republic characterized by analysis of cytochrome c oxidase subunit I. Tocko Marabena Brice Kette, Silla Semballa, Simiand Christophe, Zinga Innocent, Legg James, Reynaud Bernard, Delatte Hélène. 2017. PloS One, 12 (8):e0182749, 16 p.

Genetic diversity of Varroa destructor parasitizing Apis mellifera unicolor in Madagascar. Rasolofoarivao Henriette, Clémencet Johanna, Speck Adrien, Raveloson-Ravaomanarivo Lala Harivelo, Reynaud Bernard, Delatte Hélène. 2017. Apidologie, 48 (5) : 648-656.

Genetic diversity of coronaviruses in bats in Lao PDR and Cambodia. Lacroix Audrey, Duong Veasna, Hul Vibol, San Sona, Davun Hull, Omaliss Keo, Chea Sokha, Hassanin Alexandre, Theppangna Watthana, Silithammavong Soubanh, Khammavong Kongsy, Singhalath Sinpakone, Greatorex Zoe, Fine Amanda Elizabeth, Goldstein Tracey, Olson Sarah, Joly Damien O., Keatts Lucy, Dussart Philippe, Afelt Aneta, Frutos Roger, Buchy Philippe. 2017. Infection, Genetics and Evolution, 48 : 10-18.

Genetic diversity of the Ralstonia solanacearum species complex in the Southwest Indian Ocean Islands. Yahiaoui Noura, Cheron Jean-Jacques, Ravelomanantsoa Santatra, Hamza Abdou Azali, Petrousse Bobb, Jeetah Rajan, Jaufeerally-Fakim Yasmina, Félicité Jérôme, Fillâtre Jacques, Hostachy Bruno, Guérin Fabien, Cellier Gilles, Prior Philippe, Poussier Stéphane. 2017. Frontiers in Plant Science, 8:2139, 18 p.

Genetic structure and gene flow of the flea Xenopsylla cheopis in Madagascar and Mayotte. Harimalala Mireille, Telfer Sandra, Delatte Hélène, Watts Phillip C., Miarinjara Adélaïde, Ramihangihajason Tojo Rindra, Rahelinirina Soanandrasana, Rajerison Minoarisoa, Boyer Sébastien. 2017. Parasites and Vectors, 10:347, 13 p.

Genetic structure of diploid gametes for the production of triploid citrus hybrids. Rouiss Houssem. 2017. Valencia : Universitat Politecnica de Valencia, 148 p. Thesis Ph. D. : Universitat Politecnica de Valencia

Genetic variation and population structure of Oryza glaberrima and development of a mini-core collection using DArTseq. Ndjiondjop Marie-Noëlle, Semagn Kassa, Gouda Comlan Arnaud, Kpeki Sèdjro B., Tia Daniel Dro, Sow Mounirou, Goungoulou Alphonse, Sié Moussa, Perrier Xavier, Ghesquière Alain, Warburton Marilyn L.. 2017. Frontiers in Plant Science, 8:1748, 19 p.

Genome-wide association analysis identifies resistance loci for bacterial blight in a diverse collection of indica rice germplasm. Zhang Fan, Wu Zhi-Chao, Wang Ming-Ming, Dingkuhn Michael, Xu Jian-Long, Zhou Yong-Li, Li Zhikang. 2017. PloS One, 12 (3):e0174598, 17 p.

Genome-wide association mapping for phenotypic plasticity in rice. Kikuchi Shinji, Bheemanahalli Raju, Jagadish Krishna S.V., Kumagai Etsushi, Masuya Yusuke, Kuroda Eiki, Raghavan Chitra, Dingkuhn Michael, Abe Akira, Shimono Hiroyuki. 2017. Plant, Cell and Environment, 40 (8) : 1565-1575.

Genome-wide association mapping for root cone angle in rice. Bettembourg Mathilde, Dardou Audrey, Audebert Alain, Thomas Emilie, Frouin Julien, Guiderdoni Emmanuel, Ahmadi Nourollah, Perin Christophe, Diévart Anne, Courtois Brigitte. 2017. Rice, 10:45, 17 p.

Genotyping by sequencing reveals the interspecific C. maxima / C. reticulata admixture along the genomes of modern citrus varieties of mandarins, tangors, tangelos, orangelos and grapefruits. Oueslati Amel, Salhi-Hannachi Amel, Luro François, Vignes Hélène, Mournet Pierre, Ollitrault Patrick. 2017. PloS One, 12 (10):e0185618, 22 p.

Geographical distribution of Toxoplasma gondii genotypes in Asia: A link with neighboring continents. Chaichan P., Mercier A., Galal L., Mahittikorn A., Ariey F., Morand Serge, Boumédiène F., Udonsom R., Hamidovic A., Murat J.B., Sukthana Y., Dardé M.L.. 2017. Infection, Genetics and Evolution, 53 : 227-238.

Invasions toolkit: Current methods for tracking the spread and impact of invasive species. Kamenova Stefanyia, Bartley T.J., Bohan David A., Boutain J.R., Colautti R.I., Domaizon Isabelle, Fontaine Colin, Lemainque Arnaud, Le Viol I., Mollot Grégory, Perga M.E., Ravigné Virginie, Massol François. 2017. In : Networks of Invasion: A Synthesis of Concepts. Bohan David A. (ed.), Dumbrell Alex J. (ed.), Massol François (ed.). Londres : Academic Press, 85-182. (Advances in Ecological Research, 56) ISBN 978-0-12-804338-7

Large-scale mitochondrial DNA analysis of native honey bee Apis mellifera populations reveals a new African subgroup private to the South West Indian Ocean islands. Techer Maéva Angélique, Clémencet Johanna, Simiand Christophe, Preeaduth Sookar, Hamza Abdou Azali, Reynaud Bernard, Delatte Hélène. 2017. BMC Genetics, 18:53, 21 p.

MERS-CoV in Arabian camels in Africa and Central Asia. Chu Daniel K.W., Chan Samuel M.S., Perera Ranawaka A.P.M., Miguel Eve, Roger François, Chevalier Véronique, Poon Leo L.M., Peiris Malik. 2017. Virus Evolution, 3 (1), suppl. : S16-S17. International BioInformatics Workshop on Virus Evolution and Molecular Epidemiology. 21, Séoul, Corée du Sud, 14 Août 2016/19 Août 2016.

Molecular basis of African yam domestication: Analyses of selection point to root development, starch biosynthesis, and photosynthesis related genes. Akakpo Roland, Scarcelli Nora, Chaïr Hâna, Dansi Alexandre, Djedatin Gustave, Thuillet Anne-Céline, Rhoné Bénédicte, François Olivier, Alix Karine, Vigouroux Yves. 2017. BMC Genomics, 18:782, 9 p.

Molecular diversity, geographic distribution and host range of monocot-infecting mastreviruses in Africa and surrounding islands. Kraberger Simona, Saumtally A. Salem, Pande Daniel, Khoodoo Michel H.R., Dhayan Sonadall, Dookun-Saumtally Asha, Shepherd Dionne Natalie, Hartnady Penelope, Atkinson Richard, Lakay Francisco, Hanson Britt, Redhi Devasha, Monjane Adérito Luis, Windram Oliver P., Walters Matthew, Oluwafemi Sunday, Lett Jean-Michel, Lefeuvre Pierre, Martin Darren Patrick, Varsani Arvind. 2017. Virus Research, 238 : 171-178.

New molecular high throughput methods for Ehrlichia ruminantium tick screening and characterization of strain genetic structure in Mozambique and at worldwide scale. Cangi Nidia. 2017. Pointe-à-Pitre : Université des Antilles, 166 p. Thesis Ph.D. : Life science. Molecular biology and Genetic : Université des Antilles et de la Guyane

New multilocus variable-number tandem-repeat analysis (MLVA) scheme for fine-scale monitoring and microevolution-related study of Ralstonia pseudosolanacearum phylotype I populations. Guinard Jérémy, Latreille Anne, Guérin Fabien, Poussier Stéphane, Wicker Emmanuel. 2017. Applied and Environmental Microbiology, 83 (5):e03095, 16 p.

Revealing the diversity of introduced Coffea canephora germplasm in Ecuador: Towards a national strategy to improve robusta. Loor Solorzano Rey Gaston, De Bellis Fabien, Leroy Thierry, Plaza Luis, Guerrero Hilton, Subia Cristian, Calderón Darío, Fernández Fabián, Garzón Iván, Lopez Diana, Vera Danilo. 2017. Scientific World Journal, 2017:e1248954, 12 p.

Testing differences between pathogen compositions with small samples and sparse data. Soubeyrand Samuel, Garreta Vincent, Monteil Caroline, Suffert Frédéric, Goyeau Henriette, Berder Julie, Moinard Jacques, Fournier Elisabeth, Tharreau Didier, Morris Cindy E., Sache Ivan. 2017. Phytopathology, 107 (10) : 1199-1208.

Tube-wise diagnostic Microarray for the multiplex characterization of the complex plant pathogen Ralstonia solanacearum. Cellier Gilles, Arribat Sandrine, Chiroleu Frédéric, Prior Philippe, Robène Isabelle. 2017. Frontiers in Plant Science, 8:821, 13 p.

Understanding the genetic diversity and population structure of yam (Dioscorea alata L.) using microsatellite markers. Arnau Gemma, Bhattacharjee Pallab, MN Sheela, Chaïr Hâna, Malapa Roger, Lebot Vincent, K. Abraham, Perrier Xavier, Petro Dalila, Penet Laurent, Pavis Claude. 2017. PloS One, 12 (3):e0174150, 17 p.

The emerging oilseed crop Sesamum indicum enters the “Omics” era. Dossa Komivi, Diouf Diaga, Wang Linhai, Wei Xin, Zhang Yanxin, Niang Mareme, Fonceka Daniel, Yu Jingyin, Mmadi Marie Ali, Yehouessi Louis W., Liao Boshou, Zhang Xiurong, Cissé Ndiaga. 2017. Frontiers in Plant Science, 8:1154, 16 p.

The genome draft of coconut (Cocos nucifera). Xiao Yong, Xu Pengwei, Fan Haikuo, Baudouin Luc, Xia Wei, Bocs Stéphanie, Xu Junyang, Li Qiong, Guo Anping, Zhou Lixia, Li Jing, Wu Yi, Ma Zilong, Armero Villanueva Alix Augusto, Issali Auguste Emmanuel, Liu Na, Peng Ming, Yang Yaodong. 2017. GigaScience, 6 (11), 11 p.

A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives. Sarah Gautier, Homa Félix, Pointet Stéphanie, Contreras Sandy, Sabot François, Nabholz Benoit, Santoni Sylvain, Sauné Laure, Ardisson Morgane, Chantret Nathalie, Sauvage Christopher, Tregear James, Jourda Cyril, Pot David, Vigouroux Yves, Chaïr Hâna, Scarcelli Nora, Billot Claire, Yahiaoui Nabila, Bacilieri Roberto, Khadari Bouchaib, Boccara Michel, Barnaud Adeline, Péros Jean-Pierre, Labouisse Jean-Pierre, Pham Jean Louis, David Jacques, Glemin Sylvain, Ruiz Manuel. 2017. Molecular Ecology Resources, 17 (3) : 565-580.

Analyse de la diversité génétique des isolats de Magnaporthe oryzae du Burkina Faso et du Togo par les marqueurs microsatellites (SSRs). Kassankogno Abalo Itolou, Ouedraogo Ibrahima, Adreit Henri, Milazzo Joëlle, Ouédraogo Léonard, Sankara Philippe, Tharreau Didier. 2016. International Journal of Biological and Chemical Sciences, 10 (5) : 2259-2267.

Ancient and modern DNA reveal dynamics of domestication and cross-continental dispersal of the dromedary. Almathen Faisal, Charruau Pauline, Mohandesan Elmira, Mwacharo Joram M., Orozco-terWengel Pablo, Pitt Daniel, Abdussamad Abdussamad M., Uerpmann Margarethe, Uerpmann Hans-Peter, De Cupere Bea, Magee Peter, Alnaqeeb Majed A., Salim Bashir, Raziq Abdul, Dessie Tadelle, Abdelhadi Omer M.A., Banabazi Mohammad H., Al-Eknah Marzouk, Walzer Chris, Faye Bernard, Hofreiter Michael, Peters Joris, Hanotte Olivier, Burger Pamela A.. 2016. Proceedings of the National Academy of Sciences of the United States of America, 113 (24) : 6707-6712.

Association mapping for Phytophthora pod rot resistance in a cacao (Theobroma cacao L.) population grown in farmers' field. Efombagn Mousseni Ives Bruno, Sounigo Olivier, Courtois Brigitte, Fouet Olivier, Jeanneau Mélanie, Lemainque Arnaud, Pavek Sylvana, Lanaud Claire. 2016. International Journal of Agriculture and Biosciences, 5 (6) : 329-336.

Association mapping of resistance to rice blast in upland field conditions. Raboin Louis-Marie, Ballini Elsa, Tharreau Didier, Ramanantsoanirina Alain, Frouin Julien, Courtois Brigitte, Ahmadi Nourollah. 2016. Rice, 9 (59), 12 p.

Association mapping of seed and disease resistance traits in Theobroma cacao L. Motilal Lambert A., Zhang Dapeng, Mischke Sue, Meinhardt Lyndel W., Boccara Michel, Fouet Olivier, Lanaud Claire, Umaharan Pathmanathan. 2016. Planta, 244 (6) : 1265-1276.

Bioécologie et diversité génétique d'Orthops palus (Heteroptera, Miridae), ravageur du manguier à La Réunion. Atiama Morguen. 2016. Saint Pierre : Université de la Réunion, 362 p. Thèse de doctorat : Biologie des populations et écologie : Université de la Réunion

Burkholderia novacaledonica sp. nov. and B. ultramafica sp. nov. isolated from roots of Costularia spp. pioneer plants of ultramafic soils in New Caledonia. Guentas Linda, Gensous Simon, Cavaloc Yvon, Ducousso Marc, Amir Hamid, De Georges de Ledenon Benjamin, Moulin Lionel, Jourand Philippe. 2016. Systematic and Applied Microbiology, 39 (3) : 151-159.

Cacao trees (Theobroma cacao L.) of the "Guiana" genetic group: "Tanpok 2012" survey. Lachenaud Philippe, Fouet Olivier, Couturier Christophe, Lanaud Claire. 2016. Genetic Resources and Crop Evolution, 63 (5) : 781-790.

Characterization and phylogenetic analysis of new bat astroviruses detected in Gabon, Central Africa. Rougeron V., Suquet E., Maganda Gael D., Jiolle Davy, Mombo I.M., Bourgarel Mathieu, Motsch Peggy, Arnathau Céline, Durand Patrick, Drexler Jan Felix, Drosten Christian, Renaud François, Prugnolle Franck, Leroy Eric M.. 2016. Acta Virologica, 60 (4) : 386-392.

Croiser une approche compréhensive des systèmes d'élevage piscicole et leur diagnostic génétique - de l'ambition aux résultats. Oswald Marc, Ravakarivelo Monique, Mikolasek Olivier, Rasamoelina Harentsoaniaina, De Verdal Hugues, Bentz B., Pepey Elodie, Cousseau F., Vandeputte Marc. 2016. In : Recherche interdisciplinaire pour le développement durable et la biodiversité des espaces ruraux malgaches. Application à différentes thématiques de territoire. Duchaufour Hervé (ed.), Razafimbelo-Andriamifidy Tantely (ed.), Rakotoarisoa Jacqueline (ed.), Ramamonjisoa Bruno (ed.), Rakotondravao. SCAC, PARRUR. Antananarivo : MYE, 219-268.

DNA barcoding and surveillance sampling strategies for Culicoides biting midges (Diptera: Ceratopogonidae) in southern India. Harrup Lara E., Laban Swathi, Purse Bethan V., Krishnamohan Reddy Yarabolu, Narasimha Reddy Yella, Munivenkatappa Byregowda Sonnahallipura, Kumar Naveen, Muniramaiah Purushotham Kondappa, Kowalli Shrikant, Prasad Minakshi, Prasad Gaya, Bettis Alison A., de Keyser Rien, Garros Claire, Gopurenko David, Bellis Glenn A., Labuschagne Karien, Mathieu Bruno, Carpenter Simon. 2016. Parasites and Vectors, 9 (461), 20 p.

Development of a worldwide consortium on evolutionary participatory breeding in quinoa. Murphy Kevin, Bazile Didier, Kellogg Julianne, Rahmanian Maryam. 2016. Frontiers in Plant Science, 7 (608), 7 p.

Dispersal and group formation dynamics in a rare and endangered temperate forest bat (Nyctalus lasiopterus, Chiroptera: Vespertilionidae). Garcia Nolasco Dourado Santos Joao, Meyer Christoph F.J., Ibáñez Carlos, Popa-Lisseanu Ana, Juste Javier. 2016. Ecology and Evolution, 6 (22) : 8193-8204.

Divergent evolutionary and epidemiological dynamics of cassava mosaic geminiviruses in Madagascar. De Bruyn Alexandre, Harimalala Mireille Aurélie, Zinga Innocent, Mabvakure Batsirai, Hoareau Murielle, Ravigné Virginie, Walters Matthew, Reynaud Bernard, Varsani Arvind, Harkins Gordon William, Martin Darren Patrick, Lett Jean-Michel, Lefeuvre Pierre. 2016. BMC Evolutionary Biology, 16 (182), 21 p.

Diversity in the trifoliate orange taxon reveals two main genetic groups marked by specific morphological traits and water deficit tolerance properties. Ben Yahmed Jihane, Costantino Gilles, Amiel P., Talon Manuel, Ollitrault Patrick, Morillon Raphaël, Luro François. 2016. Journal of Agricultural Science, 154 (3) : 495-514.

Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae. Islam M. Totazzal, Croll Daniel, Gladieux Pierre, Soanes Darren M., Persoons Antoine, Bhattacharjee Pallab, Hossain Md. Shaid, Gupta Dipali Rani, Rahman Md Mahbubur, Mahboob M. Golam, Cook Nicola, Salam Moin U., Surovy Musrat Zahan, Sancho Vanessa Bueno, Maciel João Leodato Nunes, NhaniJúnior Antonio, Castroagudín Vanina Lilián, de Assis Reges Juliana T., Ceresini Paulo Cezar, Ravel Sébastien, Kellner Ronny, Fournier Elisabeth, Tharreau Didier, Lebrun Marc-Henri, McDonald Bruce A., Stitt Timothy, Swan Daniel, Talbot Nicholas J., Saunders Diane G.O., Win Joe, Kamoun Sophien. 2016. BMC Biology, 14 (84), 11 p.

Entomologie moléculaire : caractérisation de la diversité des diptères vecteurs et de leurs systèmes vectoriels. Garros Claire. 2016. Montpellier : UM2, 186 p. Habilitation à diriger des recherches : Université Montpellier 2

Escherichia coli population structure and antibiotic resistance at a buffalo/cattle interface in Southern Africa. Mercat Mathilde, Clermont Olivier, Massot Méril, Ruppe Etienne, De Garine-Wichatitsky Michel, Miguel Eve, Valls Fox Hugo, Cornélis Daniel, Andremont Antoine, Denamur Erick, Caron Alexandre. 2016. Applied and Environmental Microbiology, 82 (5) : 1459-1467.

Etude phénotypique et génétique de la tolérance bovine aux trypanosomoses, à l'interface de recherches sur les trypanosomoses et la caractérisation des ressources génétiques animales. Thevenon Sophie. 2016. Montpellier : Université de Montpellier, 153 p.. Habilitation à diriger des recherches : Université de Montpellier

Extra molting and selection on nymphal growth in the desert locust. Pélissié Benjamin, Piou Cyril, Jourdan Hélène, Pagès Christine, Blondin Laurence, Chapuis Marie-Pierre. 2016. PloS One, 11 (5):e0155736, 18 p.

First report of the tick Hyalomma scupense (natural vector of bovine tropical theileriosis) on the French Mediterranean island of Corsica. Grech-Angelini Sébastien, Stachurski Frédéric, Lancelot Renaud, Boissier Jérôme, Allienne Jean-François, Gharbi Mohamed, Uilenberg Gerrit. 2016. Veterinary Parasitology, 216 : 33-37.

Gene coexpression network analysis of oil biosynthesis in an interspecific backcross of oil palm. Guérin Chloé, Joët Thierry, Serret Julien, Lashermes Philippe, Vaissayre Virginie, Agbessi Mawussé D.T., Beulé Thierry, Severac Dany, Amblard Philippe, Tregear James, Durand-Gasselin Tristan, Morcillo Fabienne, Dussert Stéphane. 2016. Plant Journal, 87 (5) : 423-441.

Genetic analysis and qtl mapping of agro-morphological traits in lowland rice (Oryza sativa L.) under drought conditions. Konate Abdourasmane K., Zongo Adama, Sangaré Jean Rodrigue, Kam Honore, Hema Drissa, Sanni Ambaliou, Audebert Alain. 2016. International Journal of Current Advanced Research, 5 (9) : 1260-1267.

Genetic diversification and dispersal of taro (Colocasia esculenta (L.) Schott). Chaïr Hâna, Traore Renan, Duval Marie-France, Rivallan Ronan, Mukherjee Archana, Aboagye L.M., Van Rensburg J., Andrianavalona V., Pinheiro de Carvalho Miguel A.A., Saborio F., Sri Prana M., Komolong Birte, Lawac Floriane, Lebot Vincent. 2016. PloS One, 11 (6):e0157712, 19 p.

Genetic diversity of rice vampireweed (Rhamphicarpa fistulosa) populations in rainfed lowland rice in West Africa. Zossou Norliette, Adoukonèou-Sagbadja Hubert, Foncéka Daniel, Baba-Moussa Lamine, Sall Mbaye Ndoye, Ahanchede Adam, Sinsin Brice Augustin. 2016. Weed Science, 64 (3) : 430-440.

Genetic diversity of the honeybee (Apis mellifera L.) populations in the Seychelles archipelago. Techer Maéva Angélique, Clémencet Johanna, Simiand Christophe, Portlouis Gilbert, Reynaud Bernard, Delatte Hélène. 2016. Insect Conservation and Diversity, 9 (1) : 13-26.

Genetic variations of Turkish bank vole, Myodes glareolus (Mammalia: Rodentia) inferred from mtDNA. Colak Reyhan, Olgun Karacan Gül, Kandemir Irfan, Colak Ercüment, Kankiliç Teoman, Yigit Nuri, Michaux Johan. 2016. Mitochondrial DNA. Part A, 27 (6) : 4372-4379.

Genome-wide association mapping of sexual incompatibility genes in cacao (Theobroma cacao L.). da Silva Marcos Ramos, Clément Didier, Gramacho Karina Peres, Monteiro Wilson Reis, Argout Xavier, Lanaud Claire, Lopes Uilson Vanderlei. 2016. Tree Genetics and Genomes, 12 (3):62, 13 p.

Geographic differentiation and population genetic structure of Moniliophthora roreri in the principal cocoa production areas in Colombia. Jaimes Yeirme, Gonzalez Carolina, Rojas Jairo, Cornejo Omar E., Mideros Maria F., Restrepo Silvia, Cilas Christian, Furtado Edson L.. 2016. Plant Disease, 100 (8) : 1548-1558.

Gestion de la diversité variétale du riz pluvial pour contrôler la pyriculariose. Raveloson Harinjaka, Rafenomanjato Antsa, Ramanantsoanirina Alain, Sester Mathilde, Raboin Louis-Marie. 2016. In : Recherche interdisciplinaire pour le développement durable et la biodiversité des espaces ruraux malgaches. Application à différentes thématiques de territoire. Duchaufour Hervé (ed.), Razafimbelo-Andriamifidy Tantely (ed.), Rakotoarisoa Jacqueline (ed.), Ramamonjisoa Bruno (ed.), Rakotondravao. SCAC, PARRUR. Antananarivo : MYE, 137-167.

Global population divergence and admixture of the brown rat (Rattus norvegicus). Puckett Emily E., Park Jane, Combs Matthew, Blum Michael J., Bryant Juliet, Caccone Adalgisa, Costa Federico, Deinum Eva E., Esther Alexandra, Himsworth Chelsea G., Keightley Peter D., Ko Albert, Lundkvist Ake, McElhinney Lorraine M., Morand Serge, Robins Judith, Russell James, Strand Tanja M., Suarez Olga, Yon Lisa, Munshi-South Jason. 2016. Proceedings of the Royal Society B: Biological Sciences, 283 (1841)

High-density SNP assay development for genetic analysis in maritime pine (Pinus pinaster). Plomion Christophe, Bartholomé Jérôme, Lesur Isabelle, Boury Christophe, Rodríguez-Quilón I., Lagraulet Hélène, Ehrenmann François, Bouffier L., Gion Jean-Marc, Grivet D., de Miguel Marina, de Maria Nuria, Cervera María-Teresa, Bagnoli F., Isik F., Vendramin Giovanni G., González-Martínez S.C.. 2016. Molecular Ecology Resources, 16 : 574-587.

Identification by the DArTseq method of the genetic origin of the Coffea canephora cultivated in Vietnam and Mexico. Garavito Andrea, Montagnon Christophe, Guyot Romain, Bertrand Benoît. 2016. BMC Plant Biology, 16 (242), 12 p.

Improvement of the banana Musa acuminata reference sequence using NGS data and semi-automated bioinformatics methods. Martin Guillaume, Baurens Franc-Christophe, Droc Gaëtan, Rouard Mathieu, Cenci Alberto, Kilian Andrzej, Hastie Alex, Dolezelova M., Aury Jean-Marc, Alberti Adriana, Carreel Françoise, D'Hont Angélique. 2016. BMC Genomics, 17 (243), 12 p.

Inheritance in doubled-diploid clementine and comparative study with SDR unreduced gametes of diploid clementine. Aleza Pablo, Cuenca José, Juarez José, Navarro Luis, Ollitrault Patrick. 2016. Plant Cell Reports, 35 (8) : 1573-1586.

Is there a genetic paradox of biological invasion? Estoup Arnaud, Ravigné Virginie, Hufbauer Ruth A., Vitalis Renaud, Gautier Mathieu, Facon Benoît. 2016. Annual Review of Ecology, Evolution, and Systematics, 47 : 51-72.

Isolation and characterization of 11 polymorphic microsatellite markers developed for Orthops palus(Heteroptera: Miridae). Atiama Morguen, Delatte Hélène, Deguine Jean-Philippe. 2016. Journal of Insect Science, 16 (1), 5 p.

LOCAL regression algorithm improves near infrared spectroscopy predictions when the target constituent evolves in breeding populations. Davrieux Fabrice, Dufour Dominique, Dardenne Pierre, Belalcazar Javier, Pizarro Monica, Luna Jorge, Londoño Luis Fernando, Jaramillo Angélica M., Sanchez Teresa, Morante Nelson, Calle Fernando, Becerra López-Lavalle Luis Agusto, Ceballos Hernan. 2016. Journal of Near Infrared Spectroscopy, 24 (2) : 109-117.

Linking morphometric and genetic divergence with host use in the tick complex, Ornithodoros capensis sensu lato. Dupraz Marlene, Toty Céline, Noel Valérie, Estrada-Pena Agustin, González-Solís Jacob, Boulinier Thierry, Dujardin Jean Pierre, McCoy Karen D.. 2016. Infection, Genetics and Evolution, 46 : 12-22.

Major histocompatibility complex selection dynamics in pathogen-infected túngara frog (Physalaemus pustulosus) populations. Kosch Tiffany A., Bataille Arnaud, Didinger Chelsea, Eimes John A., Rodríguez-Brenes Sofia, Ryan Michael G., Waldman Bruce. 2016. Biology Letters, 12 (8):e20160345, 6 p.

Metagenomic-based screening and molecular characterization of cowpea-infecting viruses in Burkina Faso. Palanga Essowé, Filloux Denis, Martin Darren Patrick, Fernandez Emmanuel, Gargani Daniel, Ferdinand Romain, Zabré Jean, Bouda Zakaria, Neya Bouma, Sawadogo Mahamadou, Traoré Oumar, Peterschmitt Michel, Roumagnac Philippe. 2016. PloS One, 11 (10):e0165188, 21 p.

Multilocus phylogeny and ecological differentiation of the "Eupelmus urozonus species group" (Hymenoptera, Eupelmidae) in the West-Palaearctic. Al Khatib Fadel, Cruaud Astrid, Fusu Lucian, Genson Gwenaëlle, Rasplus Jean-Yves, Ris Nicolas, Delvare Gérard. 2016. BMC Evolutionary Biology, 16 (13), 20 p.

Multilocus variable number of tandem repeat analysis reveals multiple introductions in Spain of Xanthomonas arboricola pv. pruni, the causal agent of bacterial spot disease of stone fruits and almond. López-Soriano Pablo, Boyer Karine, Morente María Clara, Peñalver Javier, Palacio-Bielsa Ana, Vernière Christian, López María M., Pruvost Olivier. 2016. PloS One, 11 (9):e0163729, 18 p.

Past and present dynamics of sorghum and pearl millet diversity in Mount Kenya region. Labeyrie Vanesse, Deu Monique, Dussert Yann, Rono Bernard, Lamy Françoise, Marangu Charles, Kiambi Dan, Calatayud Caroline, Coppens D'Eeckenbrugge Geo, Robert Thierry, Leclerc Christian. 2016. Evolutionary Applications, 9 (10) : 1241-1257.

Pathogen effectors and plant immunity determine specialization of the blast fungus to rice subspecies. Liao Jingjing, Huang Huichuan, Meusnier Isabelle, Adreit Henri, Ducasse Aurélie, Bonnot François, Pan Lei, He Xiahong, Kroj Thomas, Fournier Elisabeth, Tharreau Didier, Gladieux Pierre, Morel Jean-Benoit. 2016. eLife, 5:e19377, 18 p.

Patterns of genetic structure and phenotypic diversity in sorghum landraces in relation to farmers' management in Burkina Faso. Kondombo Clarisse Pulchérie, Deu Monique, Chantereau Jacques, Martin Guillaume, Chapuis Elodie, Letourmy Philippe, Zongo Jean-Didier, Sagnard Fabrice, Vom Brocke Kirsten. 2016. International Journal of Biological and Chemical Sciences, 10 (4) : 1747-1764.

Phylogenetic origin of limes and lemons revealed by cytoplasmic and nuclear markers. Curk Franck, Ollitrault Frédérique, Garcia-Lor Andrés, Luro François, Navarro Luis, Ollitrault Patrick. 2016. Annals of Botany, 117 (4) : 565-583.

Population genetics of African frugivorous fruit flies (Diptera, Tephritidae): Current knowledge and future perspectives. Virgilio Massimiliano, Delatte Hélène. 2016. In : Fruit fly research and development in Africa: Towards a sustainable management strategy to improve horticulture. Ekesi Sunday (ed.), Mohamed Samira A. (ed.), De Meyer Marc (ed.). Cham : Springer International Publishing, 35-51. ISBN 978-3-319-43224-3

Preliminary study on prevalence, risk factor and genetic homogeneity of porcine reproductive and respiratory syndrome virus in registered pig farms in Heilongjiang, China. Wang Jingfei, Wen H., Wang Shaoli, Sun W., Shen N., Liu Z., Liu Yating, Jiang C., Sun G., Goutard Flavie, Cai X.. 2016. Transboundary and Emerging Diseases, 63 (5) : e369-e380.

Range expansion of the Bluetongue vector, Culicoides imicola, in continental France likely due to rare wind-transport events. Jacquet Stéphanie, Huber Karine, Pagès Nonito, Talavera Sandra, Burgin Laura E., Carpenter Simon, Sanders Christopher, Dicko Ahmadou Hamady, Djerbal Mouloud, Goffredo Maria, Lhor Youssef, Lucientes Javier, Miranda-Chueca Miguel Angel, Pereira da Fonseca Isabel, Ramilo David, Setier-Rio Marie-Laure, Bouyer Jérémy, Chevillon Christine, Balenghien Thomas, Guis Hélène, Garros Claire. 2016. Scientific Reports, 6 (27247), 14 p.

Reappraisal of Hydatigera taeniaeformis (Batsch, 1786) (Cestoda: Taeniidae) sensu lato with description of Hydatigera kamiyai n. sp. Lavikainen Antti, Iwaki Takashi, Haukisalmi Voitto, Konyaev Sergey V., Casiraghi Maurizio, Dokuchaev Nikolai E., Galimberti Andrea, Halajian Ali, Henttonen Heikki, Ichikawa-Seki Madoka, Itagaki Tadashi, Krivopalov Anton V., Meri Seppo, Morand Serge, Näreaho Anu, Olsson Gert E., Ribas Alexis, Terefe Yitagele, Nakao Minoru. 2016. International Journal for Parasitology, 46 (5-6) : 361-374.

Recombination is a major driving force of genetic diversity in the Anaplasmataceae Ehrlichia ruminantium. Cangi Nidia, Gordon Jonathan, Bournez Laure, Pinarello Valérie, Aprelon Rosalie, Huber Karine, Lefrançois Thierry, Neves Luis, Meyer Damien, Vachiery Nathalie. 2016. Frontiers in Cellular and Infection Microbiology, 6:111, 14 p.

SSR markers indicate a common origin of self-pollinating dwarf coconut in South-East Asia under domestication. Perera Lalith, Baudouin Luc, Mackay Ian. 2016. Scientia Horticulturae, 211 : 255-262.

Spatio-temporal genetic variation of the biting midge vector species Culicoides imicola (Ceratopogonidae) Kieffer in France. Jacquet Stéphanie, Huber Karine, Guis Hélène, Setier-Rio Marie-Laure, Goffredo Maria, Allene Xavier, Rakotoarivony Ignace, Chevillon Christine, Bouyer Jérémy, Baldet Thierry, Balenghien Thomas, Garros Claire. 2016. Parasites and Vectors, 9 (141), 12 p.

Subspecific taxonomy of the desert locust, Schistocerca gregaria (Orthoptera: Acrididae), based on molecular and morphological characters. Chapuis Marie-Pierre, Bazelet Corinna S., Blondin Laurence, Foucart Antoine, Vitalis Renaud, Samways Michael J.. 2016. Systematic Entomology, 41 (3) : 516-530.

A genome-wide association study on the seedless phenotype in banana (Musa spp.) reveals the potential of a selected panel to detect candidate genes in a vegetatively propagated crop. Sardos Julie, Rouard Mathieu, Hueber Yann, Cenci Alberto, Hyma Katie E., Van Den Houwe Ines, Hribova Eva, Courtois Brigitte, Roux Nicolas. 2016. PloS One, 11 (5):e0154448, 25 p.

A novel multilocus variable number tandem repeat analysis typing scheme for African phylotype III strains of the Ralstonia solanacearum species complex. Ravelomanantsoa Santatra, Robène Isabelle, Chiroleu Frédéric, Guérin Fabien, Poussier Stéphane, Pruvost Olivier, Prior Philippe. 2016. PeerJ, 4 (e1949), 22 p.

A physical map of important QTLs, functional markers and genes available for sesame breeding programs. Dossa Komivi. 2016. Physiology and Molecular Biology of Plants, 22 : 613-619.

Accuracy of genomic selection in a rice synthetic population developed for recurrent selection breeding. Grenier Cécile, Cao Tuong-Vi, Ospina Yolima, Quintero Constanza, Châtel Marc, Tohmé Joe, Courtois Brigitte, Ahmadi Nourollah. 2015. PloS One, 10 (8):e0136594, 25 p.

Apport de l'épidémiologie moléculaire et des approches inférentielles dans l'analyse de l'émergence et des routes d'invasion de Xanthomonas citri pv. citri en Afrique, bactérie responsable du Chancre asiatique des agrumes. Leduc Alice. 2015. Saint Denis : Université de la Réunion, 332 p. Thèse de doctorat : Sciences. Génétique des populations, phytopathologie, bactériologie, épidémiologie moléculaire : Université de la Réunion

Biological invasion and biological control select for different life histories. Tayeh Ashraf, Hufbauer Ruth A., Estoup Arnaud, Ravigné Virginie, Frachon Léa, Facon Benoît. 2015. Nature Communications, 6 (7268), 5 p.

Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso. Leduc Alice, Traoré Yaya Nadia, Boyer Karine, Magne Maxime, Grygiel Pierre, Juhasz C.C., Boyer Claudine, Guérin Fabien, Wonni Issa, Ouédraogo Léonard, Vernière Christian, Ravigné Virginie, Pruvost Olivier. 2015. Environmental Microbiology, 17 (11) : 4429-4442.

Colonization of the Mediterranean Basin by the vector biting midge species Culicoides imicola: an old story. Jacquet Stéphan, Garros Claire, Lombaert E., Walton E., Restrepo J., Allene Xavier, Baldet Thierry, Cetre-Sossah Catherine, Chaskopoulou A., Delecolle Jean Claude, Desvars Amélie, Djerbal Mouloud, Fall Moussa, Gardes Laëtitia, De Garine-Wichatitsky Michel, Goffredo Maria, Gottlieb Yuval, Gueye Fall Assane, Kasina M., Labuschagne Karien, Lhor Youssef, Lucientes Javier, Martin Thibaud, Mathieu Bertrand, Miranda Miguel Angel, Pages Nitu, Pereira da Fonseca Isabel, Ramilo David, Segard Adeline, Setier-Rio Marie-Laure, Stachurski Frédéric, Tabbabi A., Talla Seck Monar, Venter Gert J., Zimba Moses, Balenghien Thomas, Guis Hélène, Chevillon Christine, Bouyer Jérémy, Huber Karine. 2015. Molecular Ecology, 24 (22) : 5707-5725.

Comparative analysis of genetic variation in kava (Piper methysticum) assessed by SSR and DArT reveals zygotic foundation and clonal diversification. Vandenbroucke Henri, Mournet Pierre, Malapa Roger, Glaszmann Jean-Christophe, Chaïr Hâna, Lebot Vincent. 2015. Genome (Ottawa), 58 (1) : 1-11.

Comparative analysis: recent developments and uses with parasites. Desdevises Yves, Morand Serge, Krasnov Boris R., Claude Julien. 2015. In : Parasite diversity and diversification: evolutionary ecology meets phylogenetics. Morand Serge (ed.), Krasnov Boris R (ed.), Littlewood D. Timothy J. (ed). Cambridge : Cambridge University Press, 337-350. ISBN 978-1-107-03765-6

Corky-root symptoms for coffee in central Veracruz are linked to the root-knot nematode Meloidogyne paranaensis, a new report for Mexico. Lopez-Lima Daniel, Sanchez-Nava Petra, Carrion Gloria, Espinosa de los Monteros Alejandro, Villain Luc. 2015. European Journal of Plant Pathology, 141 (3) : 623-629.

DHOEM: a statistical simulation software for simulating new markers in real SNP marker data. Jacquin Laval, Cao Tuong-Vi, Grenier Cécile, Ahmadi Nourollah. 2015. BMC Bioinformatics, 16 (404), 8 p.

Deciphering genome content and evolutionary relationships of isolates from the fungus Magnaporthe oryzae attacking different host plants. Chiapello Hélène, Mallet Ludovic, Guerin Cyprien, Aguileta Gabriela, Amselem Joelle, Kroj Thomas, Ortega-Abboud Enrique, Lebrun Marc-Henri, Henrissat Bernard, Gendrault Annie, Rodolphe François, Tharreau Didier, Fournier Elisabeth. 2015. Genome Biology and Evolution, 7 (10) : 2896-2912.

Detection of genetically isolated entities within the Mediterranean species of Bemisia tabaci: new insights into the systematics of this worldwide pest. Mouton Laurence, Gnankine Olivier, Henri Hélène, Terraz Gabriel, Ketoh Guillaume Koffivi, Martin Thibaud, Fleury Frédéric, Vavre Fabrice. 2015. Pest Management Science, 71 (3) : 452-458.

Development of a 63K SNP array for cotton and high-density mapping of intraspecific and interspecific populations of Gossypium spp. Hulse-Kemp Amanda M., Lemm Jana, Plieske Joerg, Ashrafi Hamid, Buyyarapu Ramesh, Fang David D., Frelichowski James, Giband Marc, Hague Steve, Hinze Lori L., Kochan Kelli J., Riggs Penny K., Scheffler Jodi, Udall Joshua, Ulloa Mauricio, Wang Shirley S., Zhu Qian-Hao, Bag Sumit K., Bhardwaj Archana, Burke John, Byers Robert L., Claverie Michel, Gore Michael A., Harker David B., Islam Md S., Jenkins Johnie N., Jones Don C., Lacape Jean-Marc, Llewellyn Danny, Percy Richard, Pepper Alan, Poland Jesse A., Mohan Rai Krishan, Sawant Samir V., Singh Sunil Kumar, Spriggs Andrew, Taylor Jen M., Wang Fei, Yourstone Scott M., Zheng Xiuting, Lawley Cindy T., Ganal Martin W., Van Deynze Allen, Wilson Iain W., Stelly David M.. 2015. G3 - Genes Genomes Genetics, 5 (6) : 1187-1209.

Draft genome sequences of two Xanthomonas euvesicatoria strains from the Balkan Peninsula. Vancheva Taca, Lefeuvre Pierre, Bogatzevska Nevena, Moncheva Penka, Koebnik Ralf. 2015. Genome Announcements, 3 (1):e01528, 2 p.

Ecotype evolution in Glossina palpalis subspecies, major vectors of sleeping sickness. De Meeus Thierry, Bouyer Jérémy, Ravel Sophie, Solano Philippe. 2015. PLoS Neglected Tropical Diseases, 9 (3):e0003497, 16 p.

Farmers' selection of quality traits in cassava (Manihot esculenta Crantz) landraces from Vanuatu. Lebot Vincent, Malapa Roger, Sardos Julie. 2015. Genetic Resources and Crop Evolution, 62 (7) : 1055-1068.

Full genome sequence analysis of two isolates reveals a novel Xanthomonas species close to the sugarcane pathogen Xanthomonas albilineans. Pieretti Isabelle, Cociancich Stéphane, Bolot Stéphanie, Carrère Sébastien, Morisset Alexandre, Rott Philippe, Royer Monique. 2015. Genes, 6 (3) : 714-733.

Genetic characterization of the honeybee (Apis mellifera) population of Rodrigues Island, based on microsatellite and mitochondrial DNA. Techer Maéva Angélique, Clémencet Johanna, Turpin Patrick, Volbert Nicolas, Reynaud Bernard, Delatte Hélène. 2015. Apidologie, 46 (4) : 445-454.

Genetic diversity of human rhinoviruses in Cambodia during a three-year period reveals novel genetic types. Naughtin Monica, Rith Sareth, Sentilhes Anne-Charlotte, Vong Sirenda, Joffret Marie-Line, Cornillot Emmanuel, Deubel Vincent, Delpeyroux Francis, Frutos Roger, Buchy Philippe. 2015. Infection, Genetics and Evolution, 35 : 42-49.

Genetic diversity of the endemic honeybee: Apis mellifera unicolor (Hymenoptera: Apidae) in Madagascar. Rasolofoarivao Henriette, Clémencet Johanna, Techer Maéva Angélique, Raveloson-Ravaomanarivo Lala Harivelo, Reynaud Bernard, Delatte Hélène. 2015. Apidologie, 46 (6) : 735-747.

Genetic diversity of the world's largest oil palm (Elaeis guineensis Jacq.) field genebank accessions using microsatellite markers. Bakoumé Claude, Wickneswari Ratnam, Siju S., Rajanaidu Nookiah, Kushairi Ahmad, Billotte Norbert. 2015. Genetic Resources and Crop Evolution, 62 (3) : 349-360.

Genetic diversity strategy for the management and use of rubber genetic resources: more than 1,000 wild and cultivated accessions in a 100-genotype core collection. Moura De Souza Livia, Le Guen Vincent, Cerqueira-Silva Carlos Bernard Moreno, Silva Carla Cristina, Mantello Camilia Campos, Conson Andre R.O., Gomes Vianna João Paulo, Zucchi Maria Imaculada, Scaloppi Junior Erivaldo José, De Freitas Fialho Josefino, Teixeira de Moraes Mario Luis, De Souza Gonçalves Paulo, Pereira de Souza Anete. 2015. PloS One, 10 (7):e0134607, 20 p.

Genetic structure analysis of strains causing citrus canker in Iran reveals the presence of two different lineages of Xanthomonas citri pv. citri pathotype A*. Pruvost Olivier, Goodarzi T., Boyer Karine, Soltaninejad H., Escalon Aline, Alavi S.M., Javegny Stéphanie, Boyer Claudine, Cottyn B., Gagnevin Lionel, Vernière Christian. 2015. Plant Pathology, 64 (4) : 776-784.

Genome wide association mapping of agro-morphological and disease resistance traits in sugarcane. Gouy Matthieu, Rousselle Yves, Thong-Chane Audrey, Anglade Audrey, Royaert Stefan, Nibouche Samuel, Costet Laurent. 2015. Euphytica, 202 (2) : 269-284.

Genome-wide association study of grain appearance and milling quality in a worldwide collection of Indica rice germplasm. Qiu Xianjin, Pang Yunlong, Yuan Zhihua, Xing Danying, Xu Jianlong, Dingkuhn Michaël, Li Zhikang, Ye Guoyou. 2015. PloS One, 10 (12):e014557, 25 p.

Genomic selection prediction accuracy in a perennial crop: case study of oil palm (Elaeis guineensis Jacq.). Cros David, Denis Marie, Sanchez Leopoldo, Cochard Benoît, Flori Albert, Durand-Gasselin Tristan, Nouy Bruno, Omoré Alphonse, Pomies Virginie, Riou Virginie, Suryana Edyana, Bouvet Jean-Marc. 2015. Theoretical and Applied Genetics, 128 (3) : 397-410.

L'élevage au Lac Tchad : une oasis pastorale diversifiée. Réounodji Frédéric, Rangé Charline, Guérin Hubert. 2015. In : Atlas du lac Tchad. Magrin Géraud (ed.), Lemoalle Jacques (ed.), Pourtier Roland (ed.). Paris : Passages - ADAPes, 114-116. ISBN 377-0-00-336508-2

Le pouvoir pathogène chez Ralstonia solanacearum phylotype II : génomique intégrative et paysages transcriptomiques en relation avec l'adaptation à l'hôte. Ailloud Florent. 2015. Saint-Denis : Université de la Réunion, 222 p. Thèse de doctorat : Microbiologie. Phytopathologie : Université de la Réunion

Long-term genomic selection for heterosis without dominance in multiplicative traits: Case study of bunch production in oil palm. Cros David, Denis Marie, Bouvet Jean-Marc, Sanchez Leopoldo. 2015. BMC Genomics, 16 (651), 16 p.

Mapping genetic determinants of viral traits with FST and quantitative trait locus (QTL) approaches. Doumayrou Juliette, Thébaud Gaël, Vuillaume Florence, Peterschmitt Michel, Urbino Cica. 2015. Virology, 484 : 346-353.

Mapping landscape friction to locate isolated tsetse populations candidate for elimination. Bouyer Jérémy, Dicko Ahmadou Hamady, Cecchi Giuliano, Ravel Sophie, Guerrini Laure, Solano Philippe, Vreysen Marc J.B., De Meeus Thierry, Lancelot Renaud. 2015. Proceedings of the National Academy of Sciences of the United States of America, 112 (47) : 14575-14580.

Microsatellite evolutionary rate and pattern in Schistocerca gregaria inferred from direct observation of germline mutations. Chapuis Marie-Pierre, Plantamp Christophe, Streiff Réjane, Blondin Laurence, Piou Cyril. 2015. Molecular Ecology, 24 (24) : 6107-6119.

Mitochondrial, nuclear, and endosymbiotic diversity of two recently introduced populations of the invasive Bemisia tabaci MED species in La Réunion. Thierry Magalie, Bile Audrey, Grondin Martial, Reynaud Bernard, Becker Nathalie, Delatte Hélène. 2015. Insect Conservation and Diversity, 8 (1) : 71-80.

Multilocus sequence analysis of xanthomonads causing bacterial spot of tomato and pepper plants reveals strains generated by recombination among species and recent global spread of Xanthomonas gardneri. Timilsina Sujan, Jibrin Mustafa O., Potnis Neha, Minsavage Gerald V., Kebede Misrak, Schwartz Allison, Bart Rebecca, Staskawicz Brian, Boyer Claudine, Vallad Gary E., Pruvost Olivier, Jones Jeffrey R., Goss Erica. 2015. Applied and Environmental Microbiology, 81 (4) : 1520-1529.

New insights on African buffalo genetics. Smitz Nathalie, Cornélis Daniel, Chardonnet Philippe, Caron Alexandre, De Garine-Wichatitsky Michel, Jori Ferran, Van Hooft Pim, Heller Rasmus, Michaux Johan. 2015. Gnusletter (1), « n.spéc. » African Buffalo, Résumé : 19-20. Symposium on African Buffalo. 1, Paris, France, 5 Novembre 2014/6 Novembre 2014.

New multilocus variable-number tandem-repeat analysis tool for surveillance and local epidemiology of bacterial leaf blight and bacterial leaf streak of rice caused by Xanthomonas oryzae. Poulin Lucie, Grygiel Pierre, Magne Maxime, Gagnevin Lionel, Rodríguez-R Luis Miguel, Forero Serna Natalia, Zhao Shuai, El Rafil M., Dao S., Tekete C., Wonni Issa, Kolta O., Pruvost Olivier, Verdier Valérie, Vernière Christian, Koebnik Ralf. 2015. Applied and Environmental Microbiology, 81 (2) : 688-698.

Out of Himalaya: The impact of past Asian environmental changes on the evolutionary and biogeographical history of Dipodoidea (Rodentia). Pisano Julie, Condamine Fabien L., Lebedev Vladimir, Bannikova Anna, Quéré Jean-Pierre, Shenbrot Georgy I., Pagès Marie, Michaux Johan. 2015. Journal of Biogeography, 42 (5) : 856-870.

Patterns of genetic variation in the endangered European mink (Mustela lutreola L., 1761). Cabria Maria Teresa, Gonzalez Elena G., Gomez-Moliner Benjamin J., Michaux Johan, Skumatov Dimitry, Kranz Andreas, Fournier Pascal, Palazon Santiago, Zardoya Rafael. 2015. BMC Evolutionary Biology, 15 (141), 15 p.

Pedigree-based linkage map in two genetic groups of oil palm. Cochard Benoît, Carasco-Lacombe Catherine, Pomies Virginie, Dufayard Jean François, Suryana Edyana, Omoré Alphonse, Durand-Gasselin Tristan, Tisne Sébastien. 2015. Tree Genetics and Genomes, 11 (4):68, 12 p.

WIDDE: a Web-Interfaced next generation database for genetic diversity exploration, with a first application in cattle. Sempere Guilhem, Moazami-Goudarzi Katayoun, Eggen André, Laloë Denis, Gautier Mathieu, Flori Laurence. 2015. BMC Genomics, 16 (940), 8 p.

Wild cacao trees (Theobroma cacao L.) in French Guiana. Lachenaud Philippe. 2015. Academic Journal of Suriname (6) : 555-560. International Congress on Biodiversity of the Guiana Shield. 3, Paramaribo, Suriname, 5 Août 2013/8 Août 2013.

A comparison of phenotypic traits related to trypanotolerance in five West African cattle breeds highlights the value of shorthorn taurine breeds. Berthier David, Peylhard Moama, Dayo Guiguigbaza-Kossigan, Flori Laurence, Sylla Souleymane, Bolly Seydou, Sakande Hassane, Chantal Isabelle, Thevenon Sophie. 2015. PloS One, 10 (5):e0126498, 21 p.

A review of the current knowledge on Zeugodacus cucurbitae (Coquillett) (Diptera, Tephritidae) in Africa, with a list of species included in Zeugodacus. De Meyer Marc, Delatte Hélène, Mwatawala Maulid W., Quilici Serge, Vayssières Jean-François, Virgilio Massimiliano. 2015. ZooKeys, 540 : 539-557.

Active sexual reproduction but no sign of genetic diversity in range-edge populations of Vanilla roscheri Rchb. f. (Orchidaceae) in South Africa. Gigant Rodolphe, De Bruyn Alexandre, Church Brigitte, Humeau Laurence, Gauvin-Bialecki Anne, Pailler Thierry, Grisoni Michel, Besse Pascale. 2014. Conservation Genetics, 15 (6) : 1403-1415.

Apis mellifera unicolor (Latreille, 1804, Hymenoptera: Apidae) et Varroa destructor (Anderson and Trueman, 2000, Acari : Varroidae) à Madagascar : diversité génétique, impact et comportement hygiénique. Rasolofoarivao Henriette. 2014. Saint-Denis : Université de la Réunion, 168 p. Thèse de doctorat : Sciences. Biologie de populations, entomologie : Université de la Réunion

Compréhension des facteurs d'invasion de l'euphorbe ésule (Euphorbia esula L.) : Interactions biotiques, abiotiques et anthropiques, dans un contexte de lutte intégrée. Auge Matthew. 2014. Montpellier : Montpellier SupAgro, 197 p. Thèse de doctorat : Ecosystèmes et sciences agronomiques : Montpellier SupAgro Centre international d'études supérieures en sciences agronomiques

Demographic processes shaping genetic variation of the solitarious phase of the desert locust. Chapuis Marie-Pierre, Plantamp Christophe, Blondin Laurence, Pagès Christine, Vassal Jean-Michel, Lecoq Michel. 2014. Molecular Ecology, 23 (7) : 1749-1763.

Development of microsatellite markers for Peristenus digoneutis (Hymenoptera: Braconidae), a key natural enemy of tarnished plant bugs. Marcari Veronica, Causse Sandrine, Hoelmer Kim, Coutinot Dominique, De Biase Alessio, Bon Marie-Claude. 2014. Conservation Genetics Resources, 6 : 421-423.

Differing courses of genetic evolution of Bradyrhizobium inoculants as revealed by long-term molecular tracing in Acacia mangium plantations. Perrineau Marie-Mathilde, Le Roux Christine, Galiana Antoine, Faye Aliou, Duponnois Robin, Goh Doreen Kim Soh, Prin Yves, Béna Gilles. 2014. Applied and Environmental Microbiology, 80 (18) : 5709-5716.

Distribution and diversity of rhizobial populations associated with Acacia senegal (L.) willd. provenances in senegalese arid and semiarid regions. Bakhoum Niokhor, Le Roux Christine, Diouf Diégane, Kane Aboubacry, Ndoye Fatou, Fall Dioumacor, Duponnois Robin, Noba Kandioura, Sylla Samba, Galiana Antoine. 2014. Open Journal of Forestry, 4 (2) : 136-143.

Diversity of Ralstonia solanacearum in French Guiana Expands Knowledge of the "Emerging Ecotype". Deberdt Peninna, Guyot Jean, Coranson Beaudu Régine, Launay Julie, Noreskal Manuella, Rivière Philippe, Vigné F., Laplace Damien, Lebreton Luc, Wicker Emmanuel. 2014. Phytopathology, 104 (6) : 586-596.

Diversité génétique, évolution et dissémination des bégomovirus africains dans les îles du sud-ouest de l'océan Indien. De Bruyn Alexandre. 2014. Saint-Denis : Université de la Réunion, 240 p. Thèse de doctorat : Sciences. Biologie moléculaire : Université de la Réunion

Diversité, évolution et émergence des phytovirus à transmission vectorielle : la chronique des géminivirus. Lett Jean-Michel. 2014. Saint-Denis : Université de la Réunion, 85 p. Habilitation à diriger des recherches : Université de la Réunion

Estimation of genealogical coancestry in plant species using a pedigree reconstruction algorithm and application to an oil palm breeding population. Cros David, Sanchez Leopoldo, Cochard Benoît, Samper Patrick, Denis Marie, Bouvet Jean-Marc, Fernandez Jesus. 2014. Theoretical and Applied Genetics, 127 (4) : 981-994.

Etude des facteurs contrôlant l'efficacité de la sélection génomique chez le palmier à huile (Elaeis guineensis Jacq.). Cros David. 2014. Montpellier : Montpellier SupAgro, 204 p. Thèse de doctorat : Systèmes intégrés en biologie, agronomie, géosciences, hydrosciences, environnement (SIBAGHE). Biologie intégrative des plantes (BIP) : Montpellier SupAgro Centre international d'études supérieures en sciences agronomiques

Evolutionary genetics underlying the spread of peste des petits ruminants virus. Libeau Geneviève, Diallo Adama, Parida Satya. 2014. Animal Frontiers, 4 (1) : 14-20.

Genetic correlations within and between isolated tsetse populations: What can we learn? De Meeus Thierry, Ravel Sophie, Rayaissé Jean-Baptiste, Kaba Dramane, Courtin Fabrice, Bouyer Jérémy, Dayo Guiguigbaza-Kossigan, Camara Mamadou, Solano Philippe. 2014. Acta Tropica, 138, suppl., S6-S11

Genetic diversity and population structure in a collection of roselle (Hibiscus sabdariffa L.) from Niger. Bakasso Yacoubou, Zaman-Allah Mainassara, Mariac Cédric, Billot Claire, Vigouroux Yves, Zongo Jean-Didier, Saadou Mahamane. 2014. Plant Genetic Resources, 12 (2) : 207-214.

Genetic effects of forest management practices: Global synthesis and perspectives. Ratnam Wickneswari, Rajora Om P., Finkeldey Reiner, Aravanopoulos Filippos, Bouvet Jean-Marc, Vaillancourt René E., Kanashiro Milton, Fady Bruno, Tomita Motoshi, Vinson Christina. 2014. Forest Ecology and Management, 333 : 52-65.

Genetic structure of Bemisia tabaci Med populations fromhome-range countries, inferred by nuclear and cytoplasmic markers: impact on the distribution of the insecticide resistance genes. Gauthier Nathalie, Clouet Cécile, Perrakis Andreas, Kapantaidaki Despoina, Peterschmitt Michel, Tsagkarakou A.. 2014. Pest Management Science, 70 (10) : 1477-1491.

Genetic structure of fragmented southern populations of African Cape buffalo (Syncerus caffer caffer). Smitz Nathalie, Cornélis Daniel, Chardonnet Philippe, Caron Alexandre, De Garine-Wichatitsky Michel, Jori Ferran, Mouton Alice, Latinne Alice, Pigneur Lise-Marie, Melletti Mario, Kanapeckas Kimberly L., Marescaux Jonathan, Lopes Pereira Carlos, Michaux Johan. 2014. BMC Evolutionary Biology, 14 (203), 19 p.

Genetic structure of the African buffalo (Syncerus caffer) at continental and population scales: an evolutionary and conservation approach. Smitz Nathalie, Cornélis Daniel, Chardonnet Philippe, Randi Ettore, Michaux Johan. 2014. In : Ecology, evolution and behaviour of wild cattle: implications for conservation. Melletti Mario (ed.), Burton James (ed.). Cambridge : Cambridge University Press, 410-430. ISBN 978-1-107-03664-2

Highly polymorphic markers reveal the establishment of an invasive lineage of the citrus bacterial pathogen Xanthomonas citri pv. citri in its area of origin. Vernière Christian, Bui Thi Ngoc Lan, Jarne Philippe, Ravigné Virginie, Guérin Fabien, Gagnevin Lionel, Le Mai Nhat, Chau Nguyen M., Pruvost Olivier. 2014. Environmental Microbiology, 16 (7) : 2226-2237.

Host-parasite network structure is associated with community-level immunogenetic diversity. Pilosof Shai, Fortuna Miguel A., Cosson Jean François, Galan Maxime, Chaisiri Kittipong, Ribas Alexis, Segal Eran, Krasnov Boris R., Morand Serge, Bascompte Jordi. 2014. Nature Communications, 5 (5172), 9 p.

Identification of an unclassified paramyxovirus in Coleura afra: A potential case of host specificity. Maganga Gaël Darren, Bourgarel Mathieu, Obame Nkoghe Judicael, N'Dilimabaka Nadine, Drosten Christian, Paupy Christophe, Morand Serge, Drexler Jan Felix, Leroy Eric M.. 2014. PloS One, 9 (12):e115588, 13 p.

Influence of ethnolinguistic diversity on the sorghum genetic patterns in subsistence farming systems in Eastern Kenya. Labeyrie Vanesse, Deu Monique, Barnaud Adeline, Calatayud Caroline, Buiron Marylène, Wambugu Peterson Weru, Manel Stéphanie, Glaszmann Jean-Christophe, Leclerc Christian. 2014. PloS One, 9 (2):e92178, 14 p.

Low genetic diversity in Melanaphis sacchari Aphid populations at the worldwide scale. Nibouche Samuel, Fartek Benjamin, Mississipi Stelly, Delatte Hélène, Reynaud Bernard, Costet Laurent. 2014. PloS One, 9 (8):e106067, 10 p.

Moko disease-causing strains of #Ralstonia solanacearum" from Brazil extend known diversity in paraphyletic phylotype II. Albuquerque Greecy M.R., Santos Liliana A., Felix Kátia C.S., Rollemberg Christtianno L., Silva Adriano M.F., Souza Elineide B., Cellier Gilles, Prior Philippe, Mariano Rosa L.R.. 2014. Phytopathology, 104 (11) : 1175-1182.

Phylogenetic relationships and population structure of Ralstonia solanacearum isolated from diverse origins in Taiwan. Lin C.H., Tsai K.C., Prior Philippe, Wang Jaw-Fen. 2014. Plant Pathology, 63 (6) : 1395-1403.

Pyrosequencing evidences the impact of cropping on soil bacterial and fungal diversity in Laos tropical grassland. Lienhard Pascal, Terrat Sébastien, Chemidlin Prévost-Bouré Nicolas, Nowak Virginie, Régnier Tiffanie, Sayphoummie Sengpanh, Panyasiri Khamkèo, Tivet Florent, Mathieu Olivier, Levêque Jean, Maron Pierre-Alain, Ranjard Lionel. 2014. Agronomy for Sustainable Development, 34 (2) : 525-533.

QTLs Detection under natural infection of Moniliophtora perniciosa in a cacao F2 progeny with Scavina-6 descendants. Feitosa Jucá Santos Francisca, Vanderlei Lopes Uilson, Pires José Luis, Melo G.R.P., Peres Gramacho Karina, Clément Didier. 2014. AgroTropica, 26 (1) : 65-72.

Salmonella serotypes in reptiles and humans, French Guiana. Gay Noellie, Le Hello Simon, Weill François-Xavier, De Thoisy Benoit, Berger Franck. 2014. Veterinary Microbiology, 170 (1-2) : 167-171.

Sequence variation and recognition specificity of the avirulence gene AvrPiz-T in Magnaporthe Oryzae field populations. Chen Chenx, Chen Meilian, Hu Jinnan, Zhang Wenjing, Zhong Zhenhui, Jia Yulin, Allaux Ludovic, Fournier Elisabeth, Tharreau Didier, Wang Guo-Liang, Wang Zonghua, Shen Wei-Chiang, Lu Guodong, Wang Baohua, Mitchell Thomas K.. 2014. Fungal Genomics and Biology, 4 (1), 8 p.

Soil Bradyrhizobium population response to invasion of a natural Quercus suber forest by the introduced nitrogen-fixing tree Acacia mearnsii in El Kala National Park, Algeria. Boudiaf Imene, Le Roux Christine, Baudoin Ezékiel, Galiana Antoine, Beddiar Arifa, Prin Yves, Duponnois Robin. 2014. Soil Biology and Biochemistry, 70 : 162-165.

South-East Asia is the center of origin, diversity and dispersion of the rice blast fungus, Magnaporthe oryzae. Saleh Dounia, Milazzo Joëlle, Adreit Henri, Fournier Elisabeth, Tharreau Didier. 2014. New Phytologist, 201 (4) : 1440-1456.

Using next-generation sequencing methods to isolate and characterize 24 simple sequence repeat loci in mandrills (Mandrillus sphinx). Benoit Laure, Mboumba Sylvère, Willaume Eric, Kappeler Peter M., Charpentier Marie J.E.. 2014. Conservation Genetics Resources, 6 (4) : 903-905.

Assessment of genetic diversity in the sorghum reference set using EST-SSR markers. Ramu Punna, Billot Claire, Rami Jean-François, Senthilvel S., Upadhyaya H.D., Ananda Reddy L., Hash Charles Tom. 2013. Theoretical and Applied Genetics, 126 (8) : 2051-2064.

Assortative mating in mixed swarms of the mosquito Anopheles gambiae s.s. M and S molecular forms, in Burkina Faso, West Africa. Dabiré K.R., Sawadogo Simon P., Diabaté Abdoulaye, Toé K.H., Kengne Pierre, Ouari Ali, Costantini Carlo, Gouagna Louis-Clément, Simard Frédéric, Baldet Thierry, Lehmann Tovi, Gibson Gabriella. 2013. Medical and Veterinary Entomology, 27 (3) : 298-312.

Biased mutational pattern and quasispecies hypothesis in H5N1 virus. Gutiérrez Ramona Alikiiteaga, Viari Alain, Godelle Bernard, Frutos Roger, Buchy Philippe. 2013. Infection, Genetics and Evolution, 15, spec. : 69-76. International Giardia and Cryptosporidium Conference. 4, Wellington, Afrique du Sud, 30 Janvier 2012/3 Février 2012.

Changing distributions of ticks: Causes and consequences. Leger Elsa, Vourc'h Gwenaël, Vial Laurence, Chevillon Christine, McCoy Karen D.. 2013. Experimental and Applied Acarology, 59 (1-2) : 219-244.

Climate change and the spread of vector-borne diseases: using approximate Bayesian computation to compare invasion scenarios for the bluetongue virus vector Culicoides imicola in Italy. Mardulyn Patrick, Goffredo Maria, Conte Ann Amaria, Hendrickx Guy, Meiswinkel Rudolf, Balenghien Thomas, Sghaier Soufien, Lohr Youssef, Gilbert Marius. 2013. Molecular Ecology, 22 (9) : 2456-2466.

Constraints on genome dynamics revealed from gene distribution among the Ralstonia solanacearum species. Lefeuvre Pierre, Cellier Gilles, Remenant Benoit, Chiroleu Frédéric, Prior Philippe. 2013. PloS One, 8 (5):e63155, 11 p.

Correspondence between genetic structure and farmers' taxonomy - a case study from dry-season sorghum landraces in northern Cameroon. Soler Clélia, Saidou Abdoul-Aziz, Hamadou Tuong-Vi, Pautasso Marco, Wencelius Jean, Joly Hélène. 2013. Plant Genetic Resources, 11 (1) : 36-49.

Development of variable number of tandem repeats typing schemes for Ralstonia solanacearum, the agent of bacterial wilt, banana Moko disease and potato brown rot. N'Guessan Carine Aya, Brisse Sylvain, Le Roux-Nio Anne-Claire, Poussier Stéphane, Koné Daouda, Wicker Emmanuel. 2013. Journal of Microbiological Methods, 92 (3) : 366-374.

Endogenous pararetroviruses - a reservoir of virus infection in plants. Chabannes Matthieu, Iskra Caruana Marie-Line. 2013. Current Opinion in Virology, 3 (6) : 615-620.

Evidence of gene flow between sympatric populations of the Middle East-Asia Minor 1 and Mediterranean putative species of Bemisia tabaci. Tahiri Abdessalem, Halkett Fabien, Granier Martine, Gueguen Gwénaelle, Peterschmitt Michel. 2013. Ecology and Evolution, 3 (8) : 2619-2633.

Evidence of habitat structuring Aedes albopictus populations in Réunion Island. Delatte Hélène, Toty Céline, Boyer Sébastien, Bouétard Anthony, Bastien Fanny, Fontenille Didier. 2013. PLoS Neglected Tropical Diseases, 7 (3):e2111, 10 p.

Genetic diversity and lineage dynamic of dengue virus serotype 1 (DENV-1) in Cambodia. Duong Veasna, Simmons Cameron, Gavotte Laurent, Viari Alain, Ong Sivuth, Chantha Ngan, Lennon Niall J., Birren Bruce W., Vong Sirenda, Farrar Jeremy J., Henn Matthew R., Deubel Vincent, Frutos Roger, Buchy Philippe. 2013. Infection, Genetics and Evolution, 15, spec. : 59-68. International Giardia and Cryptosporidium Conference. 4, Wellington, Afrique du Sud, 30 Janvier 2012/3 Février 2012.

Genetic diversity and parentage in farmer varieties of cacao (Theobroma cacao L.) from Honduras and Nicaragua as revealed by single nucleotide polymorphism (SNP) markers. Ji Kun, Zhang Dapeng, Motilal Lambert A., Boccara Michel, Lachenaud Philippe, Meinhardt Lyndel W.. 2013. Genetic Resources and Crop Evolution, 60 (2) : 441-453.

Genetic diversity in Brazilian tall coconut populations by microsatellite markers. Ribeiro Francisco Elias, Baudouin Luc, Lebrun Patricia, Chaves Lázaro José, Brondani Claudio, Fernandes Nassau Costa Emiliano, Vencovsky Roland. 2013. Crop Breeding and Applied Biotechnology, 13 (4) : 356-362.

Global analysis of Coffea canephora Pierre ex Froehner (Rubiaceae) from the Guineo-Congolese region reveals impacts from climatic refuges and migration effects. Cubry Philippe, De Bellis Fabien, Pot David, Musoli Pascal, Leroy Thierry. 2013. Genetic Resources and Crop Evolution, 60 (2) : 483-501.

Highlighting the occurrence of tetraploidy in Acacia senegal (L.) Willd. and genetic variation patterns in its natural range revealed by DNA microsatellite markers. Assoumane Aichatou, Zoubeirou Alzouma Mayaki, Rodier-Goud Marguerite, Favreau Bénédicte, Bezançon Gilles, Verhaegen Daniel. 2013. Tree Genetics and Genomes, 9 (1) : 93-106.

Historical collections reveal patterns of diffusion of sweet potato in Oceania obscured by modern plant movements and recombination. Roullier Caroline, Benoit Laure, McKey Doyle B., Lebot Vincent. 2013. Proceedings of the National Academy of Sciences of the United States of America, 110 (6) : 2205-2210.

Invasive mango blossom gall midge, Procontarinia mangiferae (Felt) (Diptera: Cecidomyiidae) in Reunion Island: ecological plasticity, permanent and structured populations. Amouroux Paul, Normand Frédéric, Nibouche Samuel, Delatte Hélène. 2013. Biological Invasions, 15 (8) : 1677-1693.

Investigating the genetic load of an emblematic invasive species: the case of the invasive harlequin ladybird Harmonia axyridis. Tayeh Ashraf, Estoup Arnaud, Hufbauer Ruth A., Ravigné Virginie, Goryacheva I., Zakharov I.A., Lombaert E., Facon Benoît. 2013. Ecology and Evolution, 3 (4) : 864-871.

Isolation and characterization of six polymorphic microsatellite loci for the Malagasy spider tortoise, Pyxis arachnoides and cross-amplification in Pyxis planicauda. Orozco-terWengel Pablo, Chiari Ylenia, Vieites David R., Pedrono Miguel, Louis Jr Edward. 2013. Amphibia-Reptilia, 34 (1) : 125-128.

Massive sorghum collection genotyped with SSR markers to enhance use of global genetic resources. Billot Claire, Ramu Punna, Bouchet Sophie, Chantereau Jacques, Deu Monique, Gardes Laëtitia, Noyer Jean-Louis, Rami Jean-François, Rivallan Ronan, Li Yu, Lu Ping, Wang Tianyu, Folkertsma Rolf T., Arnaud Elizabeth, Upadhyaya Hari D., Glaszmann Jean-Christophe, Hash Charles Tom. 2013. PloS One, 8 (4):e59714, 16 p.

Métagénomique virale et pathologie Une histoire récente. Bernardo Pauline, Albina Emmanuel, Eloit Marc, Roumagnac Philippe. 2013. MS - Médecine Sciences, 29 (5) : 501-508.

Organización de la diversidad genética de los cítricos. Garcia Lor Andrés. 2013. Valence : Universidad Politecnica de Valencia, 259 p. Tesis doctoral : Universidad Politecnica de Valencia

Pan-African genetic structure in the African Buffalo (Syncerus caffer): Investigating intraspecific divergence. Smitz Nathalie, Berthouly Cécile, Cornélis Daniel, Heller Rasmus, Van Hooft Pim, Chardonnet Philippe, Caron Alexandre, Prins Herbert, Van Vuuren Bettine Jansen, De Longh Hans, Michaux Johan. 2013. PloS One, 8 (2):e56325, 17 p.

Phylogénie, structure génétique et diversité de virulence de Ralstonia solanacearum Yabucchi et al. (1995),[Burkhoderiacées], agent du flétrissement bactérien en Côte d'Ivoire. N'Guessan Carine Aya. 2013. Abidjan : UFHB, 248 p. Thèse de doctorat : Phytopathologie : Université de Cocody

Plant feeding by insect vectors can affect life cycle, population genetics and evolution of plant viruses. Gutiérrez Serafin, Michalakis Yannis, Van Munster Manuella, Blanc Stéphane. 2013. Functional Ecology, 27 (3) : 610-622.

Population genomics of the endangered giant Galápagos tortoise. Loire Etienne, Chiari Ylenia, Bernard Aurélien, Cahais Vincent, Romiguier Jonathan, Nabholz Benoit, Lourenco Joao M., Galtier Nicolas. 2013. Genome Biology, 14 (12) : R136.

Population structure of the melon fly, Bactrocera cucurbitae, in Reunion Island. Jacquard Cathy, Virgilio Massimiliano, David Patrice, Quilici Serge, De Meyer Marc, Delatte Hélène. 2013. Biological Invasions, 15 (4) : 759-773.

Reference-free population genomics from next-generation transcriptome data and the vertebrate–invertebrate gap. Gayral Philippe, Melo-Ferreira José, Glemin Sylvain, Bierne Nicolas, Carneiro Miguel, Nabholz Benoit, Lourenco Joao M., Alves Paulo, Ballenghien Marion, Faivre Nicolas, Belkhir Khalid, Cahais Vincent, Loire Etienne, Bernard Aurélien, Galtier Nicolas. 2013. PLoS Genetics, 9 (4):e1003457, 15 p.

Structure and genetic diversity of Ixora margaretae an endangered species. Verhaegen Daniel, Assoumane Aichatou, Serret Julien, Noe S., Favreau Bénédicte, Vaillant Alexandre, Gâteblé Gildas, Pain Anthony, Papineau Christian, Maggia Laurent, Tassin Jacques, Bouvet Jean-Marc. 2013. Tree Genetics and Genomes, 9 (2) : 511-524.

Typage génétique et distribution de l'ectoparasite Varroa destructor (Acari : Varroidea) à Madagascar depuis sa première description en 2010. Rasolofoarivao Henriette, Clémencet Johanna, Raveloson-Ravaomanarivo Lala Harivelo, Razafindrazaka Dimby, Reynaud Bernard, Delatte Hélène. 2013. La Santé de l'Abeille (255) : 290-303.

Understanding the genetic, demographical and/or ecological processes at play in invasions: lessons from the southern cattle tick Rhipicephalus microplus (Acari: Ixodidae). Chevillon Christine, De Garine-Wichatitsky Michel, Barré Nicolas, Ducornez Sophie, De Meeus Thierry. 2013. Experimental and Applied Acarology, 59 (1-2) : 203-218.

Using neutral cline decay to estimate contemporary dispersal: a generic tool and its application to a major crop pathogen. Rieux Adrien, Lenormand Thomas, Carlier Jean, De Lapeyre de Bellaire Luc, Ravigné Virginie. 2013. Ecology Letters, 16 (6) : 721-730.

Within-population polymorphism of sex-determination systems in the common frog (Rana temporaria). Rodrigues Nicolas, Betto-Colliard Caroline, Jourdan Hélène, Perrin Nicolas. 2013. Journal of Evolutionary Biology, 26 (7) : 1569-1577.

An initial assessment of linkage disequilibrium (LD) in coffee trees: LD patterns in groups of Coffea canephora Pierre using microsatellite analysis. Cubry Philippe, De Bellis Fabien, Avia Komlan, Bouchet Sophie, Pot David, Dufour Magali, Legnaté Hyacinthe, Leroy Thierry. 2013. BMC Genomics, 14 (10), 15 p.

Amélioration génétique du caféier Coffea canephora Pierre : connaissances acquises, stratégies et perspectives. Montagnon Christophe, Cubry Philippe, Leroy Thierry. 2012. Cahiers Agricultures, 21 (2-3) : 143-153.

Arms race co-evolution of Magnaporthe oryzae AVR-Pik and rice Pik genes driven by their physical interactions. Kanzaki Hiroyuki, Yoshida Kentaro, Saitoh Hiromasa, Fujisaki Koki, Hirabuchi Akiko, Alaux Ludovic, Fournier Elisabeth, Tharreau Didier, Terauchi Ryohei, Sundaresan Venkatesan. 2012. Plant Journal, 72 (6) : 894-907.

Asexual reproduction induces a rapid and permanent loss of sexual reproduction capacity in the rice fungal pathogen Magnaporthe oryzae : Results of in vitro experimental evolution assays. Saleh Dounia, Milazzo Joëlle, Adreit Henri, Tharreau Didier, Fournier Elisabeth. 2012. BMC Evolutionary Biology, 12 (42), 16 p.

Beauveria brongniartii on white grubs attacking sugarcane in South Africa. Goble Tarryn, Costet Laurent, Robène Isabelle, Nibouche Samuel, Rutherford R.S., Conlong Desmond, Hill M.P.. 2012. Journal of Invertebrate Pathology, 111 (3) : 225-236.

Biologie de la reproduction et diversité génétique et spatiale de deux espèces du genre Vanilla (Orchidaceae) du sud-ouest de l'océan Indien : V. humblotii et V. roscheri. Implications pour leur conservation. Gigant Rodolphe. 2012. Saint-Denis : Université de la Réunion, 203 p. Thèse de doctorat : Sciences. Génétique : Université de la Réunion

Construction of chromosome segment substitution lines in peanut (Arachis hypogaea L.) using a wild synthetic and QTL mapping for plant morphology. Foncéka Daniel, Tossim Hodo-Abalo, Rivallan Ronan, Vignes Hélène, Lacut Elodie, De Bellis Fabien, Faye Issa, Ndoye Ousmane, Leal-Bertioli Soraya C.M., Valls José F.M., Bertioli David J., Glaszmann Jean-Christophe, Courtois Brigitte, Rami Jean-François. 2012. PloS One, 7 (11):e48642, 11 p.

Contrasting introduction scenarios among continents in the worldwide invasion of the banana fungal pathogen Mycosphaerella fijiensis. Robert Stéphanie, Ravigné Virginie, Zapater Marie-Françoise, Abadie Catherine, Carlier Jean. 2012. Molecular Ecology, 21 (5) : 1089-1114.

Contrasting recombination patterns and demographic histories of the plant pathogen Ralstonia solanacearum inferred from MLSA. Wicker Emmanuel, Lefeuvre Pierre, De Cambiaire Jean-Charles, Lemaire Christophe, Poussier Stéphane, Prior Philippe. 2012. ISME Journal, 6 : 961-974.

Dynamique des populations microbiennes au cours du traitement post récolte du café et relations interspécifiques entre souches ochratoxinogènes. Durand Noël. 2012. Montpellier : UM2, 240 p. Thèse de doctorat : Sciences des procédés Sciences des aliments. Biotechnologie, microbiologie : Université Montpellier 2

Effects of organic and inorganic applications on soil bacterial and fungal microbial communities diversity and impacts of earthworms on microbial diversity in the Kabete long-term trial, Kenya. Kamaa Mary M., Mburu Harrison N., Blanchart Eric, Chibole Livingstone, Chotte Jean-Luc, Kibunja Catherine N., Lesueur Didier. 2012. In : Lessons learned from long-term soil fertility management experiments in Africa. Bationo André (ed.), Waswa Boaz (ed.), Kihara Job (ed.), Adolwa Ivan Solomon (ed.), Vanlauwe Bernard (ed.), Saidou Koala (ed.). Heidelberg : Springer [Allemagne], 121-136. ISBN 978-94-007-2937-7

Elucidation of genetic identity and population structure of cacao germplasm within an international cacao genebank. Motilal Lambert A., Zhang Dapeng, Umaharan Pathmanathan, Boccara Michel, Mischke Sue, Sankar Antoinette, Meinhardt Lyndel W.. 2012. Plant Genetic Resources, 10 (3) : 232-241.

Emergence mondiale de la maladie des raies noires du bananier : histoire de l'invasion et stratégie de vie du champignon phytopathogène Mycosphaerella fijiensis. Robert Stéphanie. 2012. Montpellier : UM2, 240 p. Thèse de doctorat : Evolution, Ecologie, Ressources génétiques , Paléontologie : Université Montpellier 2

Foundation characteristics of edible Musa triploids revealed from allelic distribution of SSR markers. Hippolyte Isabelle, Jenny Christophe, Gardes Laëtitia, Bakry Frédéric, Rivallan Ronan, Pomies Virginie, Cubry Philippe, Tomekpé Kodjo, Risterucci Ange-Marie, Roux Nicolas, Rouard Mathieu, Arnaud Elizabeth, Kolesnikova-Allen Maria, Perrier Xavier. 2012. Annals of Botany, 109 (5) : 937-951.

Genetic architecture of sexual selection: QTL mapping of male song and female receiver traits in an acoustic moth. Limousin Denis, Streiff Réjane, Courtois Brigitte, Dupuy Virginie, Alem Sylvain, Greenfield Michael D.. 2012. PloS One, 7 (9):e44554, 13 p.

Genetic structure in a dynamic baboon hybrid zone corroborates behavioural observations in a hybrid population. Charpentier Marie J.E., Fontaine M.C., Cherel E., Renoult Julien P., Jenkins T., Benoit Laure, Barthès Nicolas, Alberts S.C., Tung J.. 2012. Molecular Ecology, 21 (3) : 715-731.

Genetic structure, linkage disequilibrium and signature of selection in sorghum: lessons from physically anchored DArT markers. Bouchet Sophie, Pot David, Deu Monique, Rami Jean-François, Billot Claire, Perrier Xavier, Rivallan Ronan, Gardes Laëtitia, Xia Ling, Wenzl Peter, Kilian Andrzej, Glaszmann Jean-Christophe. 2012. PloS One, 7 (3):e33470, 14 p.

Isolation and characterization of new polymorphic microsatellite markers for the tick Ixodes ricinus (Acari, Ixodidae). Noel Valérie, Leger Elsa, Gómez-Díaz Elena, Risterucci Ange-Marie, McCoy Karen D.. 2012. Acarologia, 52 (2) : 123-128.

Microsatellite markers for population studies of Phytophthora megakarya (Pythiaceae), a cacao pathogen in Africa. Mfegue Crescence Virginie, Herail Claude, Adreit Henri, Mbenoum Michael, Techou Zaccharie, Ten Hoopen Gerben Martijn, Tharreau Didier, Ducamp Michel. 2012. American Journal of Botany, 99 (9), e353-e356

Mitochondrial genomes reveal the global phylogeography and dispersal routes of the migratory locust. Ma Chuan, Yang Pengcheng, Jiang Feng, Chapuis Marie-Pierre, Shali Yasen, Sword Gregory A., Kang Le. 2012. Molecular Ecology, 21 (17) : 4344-4358.

Numerous clones resistant to Phytophthora palmivora in the "Guiana" genetic group of Theobroma cacao L. Thévenin Jean-Marc, Rossi Vivien, Ducamp Michel, Doare Fabien, Condina Virgile, Lachenaud Philippe. 2012. PloS One, 7 (7):e40915, 6 p.

Occurrence and genetic diversity of phosphate-solubilizing bacteria in soils of differing chemical characteristics in Kenya. Ndung'u-Magiroi Keziah Wairimu, Herrmann Laetitia, Okalebo John Robert, Othieno Calebo O., Pypers Pieter, Lesueur Didier. 2012. Annals of Microbiology, 62 (3) : 897-904.

Population structures of three Calliptamus spp. (Orthoptera: Acrididae) across the Western Mediterranean Basin. Blanchet Elodie, Lecoq Michel, Sword Gregory A., Pagès Christine, Blondin Laurence, Billot Claire, Rivallan Ronan, Foucart Antoine, Vassal Jean-Michel, Risterucci Ange-Marie, Chapuis Marie-Pierre. 2012. European Journal of Entomology, 109 (3) : 445-455.

Sex at the origin: an Asian population of the rice blast fungus Magnaporthe oryzae reproduces sexually. Saleh Dounia, Xu Peng, Shen Ying, Li Chengyun, Adreit Henri, Milazzo Joëlle, Ravigné Virginie, Bazin Eric, Nottéghem Jean-Loup, Fournier Elisabeth, Tharreau Didier. 2012. Molecular Ecology, 21 (6) : 1330-1344.

Uncontrolled admixture and loss of genetic diversity in a local Vietnamese pig breed. Berthouly-Salazar Cécile, Thevenon Sophie, Thu Nhu Van, Trong Nguyen Binh, Pham Lan Doan, Vu Chi Cuong, Maillard Jean-Charles. 2012. Ecology and Evolution, 2 (5) : 962-975.

Wide genetic diversity of Ralstonia solanacearum strains affecting tomato in Trinidad, West Indies. Ramsubhag A., Lawrence D., Cassie D., Fraser R., Umaharan Pathmanathan, Prior Philippe, Wicker Emmanuel. 2012. Plant Pathology, 61 (5) : 844-857.

The chestnut blight fungus world tour: successive introduction events from diverse origins in an invasive plant fungal pathogen. Dutech Cyril, Barrès Benoit, Bridier Julie, Robin Cécile, Milgroom Michael, Ravigné Virginie. 2012. Molecular Ecology, 21 (16) : 3931-3946.

A comparative analysis of fine-scale genetic structure in three closely related syntopic species of the grasshopper genus Calliptamus. Blanchet Elodie, Lecoq Michel, Sword Gregory A., Berthier Karine, Pagès Christine, Billot Claire, Rivallan Ronan, Foucart Antoine, Vassal Jean-Michel, Risterucci Ange-Marie, Chapuis Marie-Pierre. 2012. Canadian Journal of Zoology, 90 (1) : 31-41.

A reference genetic map of C. clementina hort. ex Tan.; citrus evolution inferences from comparative mapping. Ollitrault Patrick, Terol Javier F., Chen Chunxian, Federici Claire T., Lotfy Samia, Hippolyte Isabelle, Ollitrault Frédérique, Bérard Aurélie, Chauveau Aurélie, Cuenca José, Costantino Gilles, Kacar A.Yildiz, Mu Lisa, Garcia-Lor Andrés, Froelicher Yann, Aleza Pablo, Boland Anne, Billot Claire, Navarro Luis, Luro François, Roose Mikeal L., Gmitter Frederick G. Jr., Talon Manuel, Brunel Dominique. 2012. BMC Genomics, 13 (593), 20 p.

Adaptation to drought in two wild tomato species: The evolution of the Asr gene family. Fischer Iris, Camus-Kulandaivelu Létizia, Allal François, Wolfgang Stephan. 2011. New Phytologist, 190 (4) : 1032-1044.

Effects of organic and inorganic fertilization on soil bacterial and fungal microbial diversity in the Kabete long-term trial, Kenya. Kamaa Mary M., Mburu Harrison N., Blanchart Eric, Chibole Livingstone, Chotte Jean-Luc, Kibunja Catherine N., Lesueur Didier. 2011. Biology and Fertility of Soils, 47 (3) : 315-321.

Etude des processus de dispersion et des flux géniques chez un champignon phytopathogène: le cas de Mycosphaerella fijiensis à l'échelle d'un bassin de production Camerounais. Rieux Adrien. 2011. Montpellier : UM2, 188 p. Thèse de doctorat : Systèmes Intégrés en biologie, agronomie, géosciences, hydrosciences, environnement. Evolution, écologie, ressources génétiques, paléontologie : Université Montpellier 2

Etudes d'associations pan-génomiques chez la canne à sucre (Saccharum spp.) : Analyse de la résistance à l'échaudure des feuilles (Xanthomonas albilineans) et à la maladie de la feuille jaune (Sugarcane Yellow Leaf Virus). Rocher Solen. 2011. Montpellier : UM2, 120 p. Thèse de doctorat : Systèmes intégrés en biologie, agronomie, géosciences, hydrosciences, environnement (SIBAGHE). Biochimie et biologie moléculaire : Université Montpellier 2

Genetic diversity of symbiotic Bradyrhizobium elkanii populations recovered from inoculated and non-inoculated Acacia mangium field trials in Brazil. Perrineau Marie-Mathilde, Le Roux Christine, De Faria Sergio Miana, De Carvalho Balieiro Fabiano, Galiana Antoine, Prin Yves, Béna Gilles. 2011. Systematic and Applied Microbiology, 34 (5) : 376-384.

Genetic structure and diversity of wild sorghum populations (Sorghum spp.) from different eco-geographical regions of Kenya. Muraya Moses, De Villiers Santie, Parzies Heiko K., Mutegi Evans, Sagnard Fabrice, Kanyenji Ben M., Kiambi Dan, Geiger Hartwig H.. 2011. Theoretical and Applied Genetics, 123 (4) : 571-583.

Genetic structure and relationships within and between cultivated and wild sorghum (Sorghum bicolor (L.) Moench) in Kenya as revealed by microsatellite markers. Mutegi Evans, Sagnard Fabrice, Semagn Kassa, Deu Monique, Muraya Moses, Kanyenji Ben M., De Villiers S., Kiambi Dan, Herselman L., Labuschagne Michel. 2011. Theoretical and Applied Genetics, 122 (5) : 989-1004.

High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane. Garsmeur Olivier, Charron Carine, Bocs Stéphanie, Jouffe Vincent, Samain Sylvie, Couloux Arnaud, Droc Gaëtan, Zini Cyrille, Glaszmann Jean-Christophe, Van Sluys Marie-Anne, D'Hont Angélique. 2011. New Phytologist, 189 (2) : 629-642.

Inferring population structures of African buffalo (Syncerus caffer) by means of Single Nucleotide Polymorphism (SNP) markers. Smitz Nathalie, Van Hooft Pim, Heller Rasmus, Chardonnet Philippe, Cornélis Daniel, Kraus R., Crooijmans Richard, Groenen M., Michaux Johan. 2011. Mammalian Biology, 76, suppl., Résumé, 1 p. (p. 22) Annual Meeting of the German Society of Mammalogy. 85, Luxembourg, Luxembourg, 13 Septembre 2011/17 Septembre 2011.

Mitochondrial DNA reveals two highly divergent genetic lineages in the African buffalo (Syncerus caffer). Smitz Nathalie, Berthouly Cécile, Cornélis Daniel, Heller Rasmus, Van Hooft Pim, Chardonnet Philippe, Michaux Johan. 2011. Mammalian Biology, 76, suppl., Résumé, 1 p. (p. 22) Annual Meeting of the German Society of Mammalogy. 85, Luxembourg, Luxembourg, 13 Septembre 2011/17 Septembre 2011.

Phylogeographie du Bois de Fer (Sideroxylon majus) sur l'île de la Réunion. Genevest Rémi. 2011. Toulouse : ENSAT, 139 p. Mémoire de fin d'études : Qualité de l'environnement et gestion des ressources : Ecole nationale supérieure agronomique de Toulouse

Spatial and temporal variation in population genetic structure of wild Nile tilapia (Oreochromis niloticus) across Africa. Bezault Etienne, Balaresque Patricia, Toguyeni Aboubacar, Fermon Yves, Araki Hitoshi, Baroiller Jean-François, Rognon Xavier. 2011. BMC Genetics, 12:102, 16 p.

Biochemical determination of acetylcholinesterase genotypes conferring resistance to the organophosphate insecticide chlorpyriphos in field populations of Bemisia tabaci from Benin, West Africa. Houndete Th., Fournier Didier, Ketoh Guillaume Koffivi, Glitho Isabelle Adolé, Nauen R., Martin Thibaud. 2010. Pesticide Biochemistry and Physiology, 98 (1) : 115-120.

Characterization of the genetic diversity of the Tall coconut (Cocos nucifera L.) in the Dominican Republic using microsatellite (SSR) markers. Martinez Reina Teresa, Baudouin Luc, Berger Angélique, Dollet Michel. 2010. Tree Genetics and Genomes, 6 (1) : 73-81.

Clonal origin of emerging populations of Ehrlichia ruminantium in Burkina Faso. Adakal Hassane, Gavotte Laurent, Stachurski Frédéric, Konkobo Maurice, Henri Hélène, Zoungrana Sébastien, Huber Karine, Vachiery Nathalie, Martinez Dominique, Morand Serge, Frutos Roger. 2010. Infection, Genetics and Evolution, 10 (7) : 903-912.

Endosymbiont metacommunities, mtDNA diversity and the evolution of the Bemisia tabaci (Hemiptera: Aleyrodidae) species complex. Gueguen Gwénaelle, Vavre Fabrice, Gnankine Olivier, Peterschmitt Michel, Charif Delphine, Chiel Elad, Gottlieb Yuval, Ghanim Murad, Zchori Fein Einat, Fleury Frédéric. 2010. Molecular Ecology, 19 (19) : 4365-4378.

Evolution and population structure of Salmonella enterica serovar Newport. Sangal Vartul, Harbottle Heather, Mazzoni Camila J., Helmuth Reiner, Guerra Beatriz, Didelot Xavier, Paglietti Bianca, Rabsch Wolfgang, Brisse Sylvain, Weill François-Xavier, Roumagnac Philippe, Achtman Mark. 2010. Journal of Bacteriology, 192 (24) : 6465-6476.

Fifty years of research and fight against tsetse flies and animal trypanosomosis in Burkina Faso. An overview. Sow A., Sidibé I., Bengaly Zakaria, Bouyer Jérémy, Bauer Burkhard, Van Den Bossche Peter. 2010. Bulletin of Animal Health and Production in Africa, 58 (2) : 95-118.

Genetic and morphometric characterization of a local Vietnamese Swamp Buffalo population. Berthouly Cécile, Rognon Xavier, Nhu Van Thu, Berthouly A., Hoang Thanh Tiem, Bed'Hom Bertrand, Laloë Denis, Vu Chi Cuong, Verrier Etienne, Maillard Jean-Charles. 2010. Journal of Animal Breeding and Genetics, 127 (1) : 74-84.

Genetic and physical mapping of the SH3 region that confers resistance to leaf rust in coffee tree (Coffea arabica L.). Lashermes Philippe, Combes Marie-Christine, Ribas Alessandra, Cenci Alberto, Mahé Laetitia, Etienne Hervé. 2010. Tree Genetics and Genomes, 6 (6) : 973-980.

Genetic structure among sorghum landraces as revealed by morphological variation and microsatellite markers in three agroclimatic regions of Burkina Faso. Barro-Kondombo Clarisse Pulchérie, Sagnard Fabrice, Chantereau Jacques, Deu Monique, Vom Brocke Kirsten, Durand Patrick Y., Gozé Eric, Zongo Jean-Didier. 2010. Theoretical and Applied Genetics, 120 (8) : 1511-1523.

Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0). Cornuet Jean-Marie, Ravigné Virginie, Estoup Arnaud. 2010. BMC Bioinformatics, 11 (401), 11 p.

Isolation of three members of the multigene family encoding ACC oxidases in Hevea brasiliensis and investigation of their responses to ethylene stimulation and wounding. Kuswanhadi, Leclercq Julie, Rio Maryannick, Tregear James, Ducamp-Collin Marie-Noelle, Montoro Pascal. 2010. Journal of Rubber Research, 13 (3) : 185-205.

Laboratory populations as a resource for understanding the relationship between genotypes and phenotypes: A global case study in locusts. Berthier Karine, Chapuis Marie-Pierre, Simpson Stephen J., Ferenz Hans-Jörg, Habib Kane Chérif M., Le Kang, Lange Angela, Ott Swidbert R., Babah Ebbe Mohamed Abdallahi Ould, Rodenburg Kees W., Rogers Stephen M., Torto Baldwin, Vanden Broeck Jozef, Van Loon Joop J.A., Sword Gregory A.. 2010. Advances in Insect Physiology, 39 : 1-37.

On-farm assessment of clonal introduction of root crops diversity in Vanuatu, Melanesia. Camus P., Lebot Vincent. 2010. Experimental Agriculture, 46 (4) : 541-559.

Preformed expression of defense is a hallmark of partial resistance to rice blast fungal pathogen Magnaporthe oryzae. Vergne Emilie, Grand Xavier, Ballini Elsa, Chalvon Véronique, Saindrenan P., Tharreau Didier, Nottéghem Jean-Loup, Morel Jean-Benoit. 2010. BMC Plant Biology, 10 (206), 17 p.

Some innovations in rice recurrent selection: The back recurrent selection (BCRS), the simplified and efficient rice breeding method (SERB), and the plant-parasite reciprocal recurrent selection (2P2RS). Vales Michel. 2010. Crop Protection, 29 (4) : 311-317.

Spatio-temporal dynamics of genetic diversity in Sorghum bicolor in Niger. Deu Monique, Sagnard Fabrice, Chantereau Jacques, Calatayud Caroline, Vigouroux Yves, Pham Jean Louis, Mariac Cédric, Kapran Issoufou, Mamadou Aïssata, Gérard Bruno, Ndjeunga Jupiter, Bezançon Gilles. 2010. Theoretical and Applied Genetics, 120 (7) : 1301-1313.

Variable number of tandem repeat markers in the genome sequence of Mycosphaerella fijiensis, the causal agent of black leaf streak disease of banana (Musa spp). Garcia S.A.L., Van der Lee Theo A.J., Ferreira Claudia Fortes, Te Lintel Hekkert B., Zapater Marie-Françoise, Goodwin Stephen B., Kema Gert H.J., Souza M.T.. 2010. Genetics and Molecular Research, 9 (4) : 2207-2212.

A saturated SSR/DArT linkage map of Musa acuminata addressing genome rearrangements among bananas. Hippolyte Isabelle, Bakry Frédéric, Seguin Marc, Gardes Laëtitia, Rivallan Ronan, Risterucci Ange-Marie, Jenny Christophe, Perrier Xavier, Carreel Françoise, Argout Xavier, Piffanelli Pietro, Khan Imtiaz A., Miller Roberto Neil Gerard, Pappas Junior Georgios, Mbéguié-A-Mbéguié Didier, Matsumoto Takashi, De Bernardinis Véronique, Huttner Eric, Kilian Andrzej, Baurens Franc-Christophe, D'Hont Angélique, Côte François-Xavier, Courtois Brigitte, Glaszmann Jean-Christophe. 2010. BMC Plant Biology, 10 (65), 18 p.

Distribution of insensitive acetylcholinesterase (ace-1R) in Anopheles gambiae s.l. populations from Burkina Faso (West Africa). Dabiré K.R., Diabaté Abdoulaye, Namountougou Moussa, Djogbenou Luc, Kengne Pierre, Simard Frédéric, Bass Chris, Baldet Thierry. 2009. Tropical Medicine and International Health, 14 (4) : 396-403.

Diversity and genetic structure of teak (Tectona grandis L.f) in its natural range using DNA microsatellite markers. Fofana Inza Jésus, Ofori Daniel, Poitel Mireille, Verhaegen Daniel. 2009. New Forests, 37 (2) : 175-195.

Ecological specialization of the aphid Aphis gossypii Glover on cultivated host plants. Carletto Jérôme, Lombaert E., Chavigny Pascal, Brévault Thierry, Lapchin L., Vanlerberghe-Masutti Flavie. 2009. Molecular Ecology, 18 (10) : 2198-2212.

Eighteen SSR-primers for tetraploid Adansonia digitata and its relatives. Larsen Anders Søndergaard, Vaillant Alexandre, Verhaegen Daniel, Kjaer Erik D.. 2009. Conservation Genetics Resources, 1 (1) : 325-328.

Genetic differentiation of wild and cultivated populations : Diversity of Coffea canephora Pierre in Uganda. Musoli Chungason Pascal, Cubry Philippe, Aluka P., Billot Claire, Dufour Magali, De Bellis Fabien, Pot David, Bieysse Daniel, Charrier André, Leroy Thierry. 2009. Genome (Ottawa), 52 : 634-646.

Genetic mapping of Magnaporthe grisea avirulence gene corresponding to leaf and panicle blast resistant QTLs in Jao Hom Nin Rice cultivar. Sreewongchai Tanee, Sriprakhon Siangchai, Vanavichit Apichart, Toojinda Theerayut, Tharreau Didier, Sirithunya Pattama. 2009. Journal of Phytopathology, 157 (6) : 338-343.

Genetic structure of Amazonian populations of Hevea brasiliensis is shaped by hydrographical network and isolation by distance. Le Guen Vincent, Doare Fabien, Weber Christelle, Seguin Marc. 2009. Tree Genetics and Genomes, 5 (4) : 673-683.

Identification and characterization of eight nuclear microsatellite loci in the glasswort Genus salicornia (Amaranthaceae). Vanderpoorten A., Raspé Olivier, Risterucci Ange-Marie, Gohy L., Hardy Olivier J.. 2009. Belgian Journal of Botany, 142 (2) : 204-208.

Isolation and characterization of 15 nuclear microsatellite markers for Baillonella toxisperma Pierre (Sapotaceae), a low-density tree species of Central Africa. Ndiade-Bourobou Dyana, Vaillant Alexandre, Favreau Bénédicte, Gayrin E., Bouvet Jean-Marc. 2009. Molecular Ecology Resources, 9 (4) : 1135-1272.

Phylogeography and population genetics of swarming grasshoppers. Chapuis Marie-Pierre. 2009. Metaleptea (Special Meeting), Résumé : 48-49. International Congress of Orthopterology. 10, Antalya, Turquie, 21 Juin 2009/25 Juin 2009.

Population genetic structure of wild and farmed rusa deer (Cervus timorensis russa) in New-Caledonia inferred from polymorphic microsatellite loci. De Garine-Wichatitsky Michel, De Meeus Thierry, Chevillon Christine, Berthier David, Barré Nicolas, Thevenon Sophie, Maillard Jean-Charles. 2009. Genetica, 137 (3) : 313-323.

Balayage du génome et évaluation du déséquilibre de liaison chez le sorgho à l'échelle mondiale et à l'échelle régionale du Mali. Bouchet Sophie. 2008. Montpellier : UM2, 178 p. Thèse de doctorat : Evolution, écologie, ressources génétiques, paléontologie : Université Montpellier 2

Do outbreaks affect genetic population structure? A worldwide survey in Locusta migratoria, a pest plagued by microsatellite null alleles. Chapuis Marie-Pierre, Lecoq Michel, Michalakis Yannis, Loiseau Anne, Sword A., Piry Sylvain, Estoup Arnaud. 2008. Molecular Ecology, 17 (16) : 3640-3653.

Exploration de la diversité des résistances génétiques à la maladie sud-américaine des feuilles de l'hévéa (Microcyclus ulei) par cartographie et génétique d'association au sein de populations naturelles. Le Guen Vincent. 2008. Montpellier : UM2, 182 p. Thèse de doctorat : Biologie intégrative des plantes : Université Montpellier 2

Genetic diversity and genetic structure of cattle population in Ha Giang province using molecular markers. Pham Doan Lan, Nguyen Trong Binh, Nguyen Van Ba, Do Ngoc Duy, Le Quang Nam, Nhu Van Thu, Le Thi Thuy, Vu Chi Cuong, Nguyen Dang Vang, Varrier Etienne, Maillard Jean-Charles. 2008. Journal of Animal Science and Technology, spec. : 109-120. International Workshop on the Domesticated Animal Biodiversity of Vietnam in the Context of Globalization, Hanoi, Viet Nam, 13 Décembre 2007/14 Décembre 2007.

Genetic diversity and population structure in wild stands of cacao trees (Theobroma cacao L.) in French Guiana. Lachenaud Philippe, Zhang Dapeng. 2008. Annals of Forest Science, 65 (3), 7 p.

Genetic diversity and structure of farm and GenBank accessions of cacao (Theobroma cacao L.) in Cameroon revealed by microsatellite markers. Efombagn Mousseni Ives Bruno, Motamayor Juan Carlos, Sounigo Olivier, Eskes Albertus, Nyassé Salomon, Cilas Christian, et al.. 2008. Tree Genetics and Genomes, 4 (4) : 821-831.

Genetic diversity of chicken population in Ha Giang based on microsatellite markers. Nguyen Trong Binh, Pham Doan Lan, Do Ngoc Duy, Nguyen Van Ba, Hoang Thanh Hai, Nhu Van Thu, Le Thi Thuy, Vu Chi Cuong, Maillard Jean-Charles. 2008. Journal of Animal Science and Technology, spec. : 121-134. International Workshop on the Domesticated Animal Biodiversity of Vietnam in the Context of Globalization, Hanoi, Viet Nam, 13 Décembre 2007/14 Décembre 2007.

Genetic diversity of goat populations in Ha Giang based on microsatellite markers. Do Ngoc Duy, Pham Doan Lan, Nguyen Trong Binh, Nguyen Van Ba, Hoang Thanh Tiem, Nhu Van Thu, Berthouly Cécile, Vu Chi Cuong, Maillard Jean-Charles. 2008. Journal of Animal Science and Technology, spec. : 140-148. International Workshop on the Domesticated Animal Biodiversity of Vietnam in the Context of Globalization, Hanoi, Viet Nam, 13 Décembre 2007/14 Décembre 2007.

Genetic diversity of pig populations in Hagiang province using micro satellites. Nguyen Van Ba, Pham Doan Lan, Do Ngoc Duy, Nguyen Trong Binh, Le Quang Nam, Nhu Van Thu, Hoang Thanh Hai, Le Thi Thuy, Vu Chi Cuong, Maillard Jean-Charles. 2008. Journal of Animal Science and Technology, spec. : 149-157. International Workshop on the Domesticated Animal Biodiversity of Vietnam in the Context of Globalization, Hanoi, Viet Nam, 13 Décembre 2007/14 Décembre 2007.

Génétique des intéractions et génétique des populations dans l'interaction entre le riz et le champignon pathogène Magnaporthe oryzae : Dossier présenté en vue d'obtenir le diplôme d'Habilitation à diriger des recherches. Tharreau Didier. 2008. Montpellier : UM2, 46 p. Habilitation à diriger des recherches : Université Montpellier 2

Linking dendritic network structures to population demogenetics : The downside of connectivity. Labonne Jacques, Ravigné Virginie, Parisi Bruno, Gaucherel Cédric. 2008. Oikos, 117 (10) : 1479-1490.

Phenotype diversity and characteristics of local chicken population in Ha Giang province. Hoang Thanh Hai, Berthouly Cécile, Nhu Van Thu, Trinh Van Binh, Tran Long, Dang Vu Binh, Vu Chi Cuong, Maillard Jean-Charles. 2008. Journal of Animal Science and Technology, spec. : 49-57. International Workshop on the Domesticated Animal Biodiversity of Vietnam in the Context of Globalization, Hanoi, Viet Nam, 13 Décembre 2007/14 Décembre 2007.

Population viscosity can promote the evolution of altruistic sterile helpers and eusociality. Lehmann Laurent, Ravigné Virginie, Keller Laurent. 2008. Proceedings - Royal Society. Biological Sciences, 275 (1645) : 1887-1895.

Preliminary characterization of poultry in Ha Giang province. Berthouly Cécile, Rognon Xavier, Nhu Van Thu, Hoang Thanh Hai, Trinh Van Binh, Verrier Etienne, Maillard Jean-Charles. 2008. Journal of Animal Science and Technology, spec. : 135-139. International Workshop on the Domesticated Animal Biodiversity of Vietnam in the Context of Globalization, Hanoi, Viet Nam, 13 Décembre 2007/14 Décembre 2007.

Small-scale spatial genetic structure in the Central African rainforest tree species Aucoumea klaineana : A stepwise approach to infer the impact of limited gene dispersal, population history and habitat fragmentation. Born Céline, Hardy Olivier J., Chevallier Marie-Hélène, Ossari Simon, Attéké Christiane, Wickings Jean, Hossaert McKey Martine. 2008. Molecular Ecology, 17 (8) : 2041-2050.

Adding value to cocoa (Theobroma cacao L.) germplasm information with domestication history and admixture mapping. Marcano Maria, Pugh Tatiana, Cros Emile, Morales Sonia, Portillo Elvis, Courtois Brigitte, Glaszmann Jean-Christophe, Engels Johannes M.M., Phillips Wilbert, Astorga Carlos, Risterucci Ange-Marie, Fouet Olivier, Gonzalez Ventura, Rosenberg Kai, Vallat Isabelle, Dagert Manuel, Lanaud Claire. 2007. Theoretical and Applied Genetics, 114 (5) : 877-884.

Ecologie de la transmission de parasites (virus, nématodes) au sein d'une communauté de rongeurs cycliques. Conséquences pour la santé humaine. Deter Julie. 2007. Montpellier : UM2, 302 p. Thèse de doctorat : Parasitologie : Université Montpellier 2

Evidence for the dispersal of a unique lineage from Asia to America and Africa in the sugarcane fungal pathogen Ustilago scitaminea. Raboin Louis-Marie, Selvi Athiappan, Oliveira Karine Miranda, Paulet Florence, Calatayud Caroline, Zapater Marie-Françoise, Brottier Philippe, Luzaran Rosalyn, Garsmeur Olivier, Carlier Jean, D'Hont Angélique. 2007. Fungal Genetics and Biology, 44 (1) : 64-76.

Microsatellite markers for population studies of the rice blast fungus, Magnaporthe grisea. Adreit Henri, Santoso, Andriantsimialona Dodelys, Utami Dwinita, Nottéghem Jean-Loup, Lebrun Marc-Henri, Tharreau Didier. 2007. Molecular Ecology Notes, 7 (4) : 667-670.

Characterization of polymorphic microsatellite loci within a young Boophilus microplus metapopulation. Koffi Brou Basile, Risterucci Ange-Marie, Joulia Dominique, Durand Patrick Y., Barré Nicolas, De Meeus Thierry, Chevillon Christine. 2006. Molecular Ecology Notes, 6 : 502-504.

Clonalité et sélection par l'hôte chez Puccinia triticina. Goyeau Henriette, Halkett Fabien, Zapater Marie-Françoise, Lannou Christian, Carlier Jean, Giraud Tatiana. 2006. In : Journées Jean Chevaugeon : VIe rencontres de phytopathologie - mycologie de la Societé française de phytopathologie du 15 au 19 janvier 2006 [Résumés]. Fernandez Diana (ed.), Carlier Jean (ed.), Tharreau Didier (ed.). CIRAD, INRA, IRD, Bayer cropscience, SFP. Montpellier : CIRAD, Résumé, 29. Journées Jean Chevaugeon, Rencontres de phytopathologie-mycologie. 6, Aussois, France, 15 Janvier 2006/19 Janvier 2006.

Différenciation populationnelle chez le parasitoïde Cotesia plutellae (Kurdjumov) (Hymenoptera: Braconidae) : génétique, comportement et évolution. Rincon Lopez Claudia. 2006. Montpellier : ENSAM, 227 p. Thèse de doctorat : Biologie des polutations et écologie : Ecole nationale supérieure agronomique de Montpellier

Diversité génétique d'Elaeis guineensis par marqueurs microsatellites et étude préliminaire du déséquilibre de liaison local. Rekima Samah. 2006. Montpellier : CIRAD, 47 p. Mémoire de master : Génétiques et gestion de la biodiversité : Université Pierre et Marie Curie

Genetic differentiation among various populations of the diamondback moth, Plutella xylostella (Lepidoptera: Yponomeutidae). Pichon Appoline, Arvanitakis Laurence, Roux Olivier, Kirk Alan A., Alauzet Claude, Bordat Dominique, Legal Luc. 2006. Bulletin of Entomological Research, 96 (2) : 137-144.

Genetic survey of two endangered grasshopper subspecies, Prionotropis hystrix rhodanica and Prionotropis hystrix azami (Orthoptera, Pamphagidae) : Within- and between-population dynamics at the regional scale. Streiff Réjane, Audiot Philippe, Foucart Antoine, Lecoq Michel, Rasplus Jean-Yves. 2006. Conservation Genetics, 7 (3) : 331-344.

Journées Jean Chevaugeon : VIe rencontres de phytopathologie - mycologie de la Societé française de phytopathologie du 15 au 19 janvier 2006 [Résumés]. Fernandez Diana (ed.), Carlier Jean (ed.), Tharreau Didier (ed.). 2006. Montpellier : CIRAD, 132 p. Journées Jean Chevaugeon, Rencontres de phytopathologie-mycologie. 6, Aussois, France, 15 Janvier 2006/19 Janvier 2006.

Microsatellites reveal extensive geographical, ecological and genetic contacts between invasive and indigenous whitefly biotypes in an insular environment. Delatte Hélène, David Patrice, Granier Martine, Lett Jean-Michel, Goldbach Rob, Peterschmitt Michel, Reynaud Bernard. 2006. Genetical Research, 87 (2) : 109-124.

Reproductive isolation and differentiation between five populations of Cotesia plutellae (Hymenoptera : Braconidae), parasitoid of Plutella xylostella (Lepidoptera : Plutellidae). Rincon Claudia, Bordat Dominique, Löhr Bernhard, Dupas Stéphane. 2006. Biological Control, 36 (2) : 171-182.

Un modèle géostatistique pour la détection et la localisation des discontinuités génétiques spatiales entre populations. Cosson Jean François, Estoup Arnaud, Coulon Aurélie, Galan Maxime, Mortier Frédéric, Hewison A.J.Marc, Guillot Gilles. 2006. In : Les ressources génétiques : des ressources partagées : 6ème Colloque national BRG, La Rochelle, 2-4 octobre 2006. BRG. Paris : BRG, 41-55. (Les Actes du BRG, 1768-2215, 6) Colloque national BRG Ressources génétiques. 6, La Rochelle, France, 2 Octobre 2006/4 Octobre 2006.

The genetic diversity of the American oil palm, Elaeis oleifera (Kunth), cortes revealed by nuclear RFLP markers. Barcelos Edson, Amblard Philippe, Berthaud Julien, Seguin Marc. 2006. In : Proceedings of the International Symposium on oil palm genetics resources and their utilization, 8-10 June 2000, Kuala Lumpur, Malaysia. Rajanaidu Nookiah (ed.), Henson I.E. (ed.), Ariffin Darus (ed.). MPOB, IPGRI, ISOPB, BUROTROP. Kajang : MPOB, 544-555. ISBN 978-967-961-122-9 International Symposium on Oil Palm Genetic Resources and their Utilization, Kuala Lumpur, Malaisie, 8 Juin 2000/10 Juin 2000.

Analyse de la diversité et évaluation du déséquilibre de liaison chez quelques populations naturelles et cultivées de caféiers Coffea canephora. Cubry Philippe. 2005. Montpellier : ENSAM, 42 p. Mémoire DEA : Ressources génétiques et interactions biologiques : Ecole nationale supérieure agronomique de Montpellier

Dynamique et génétique des populations d'insectes vecteurs : les stomoxes, Stomoxys calcitrans et Stomoxys niger niger dans les élevages bovins réunionnais. Gilles Jérémie. 2005. Saint-Denis : Université de la Réunion, 151 p. Thèse de doctorat : Sciences : Université de la Réunion

Geneland: A computer package for landscape genetics. Guillot Gilles, Mortier Frédéric, Estoup Arnaud. 2005. Molecular Ecology Notes, 5 (3) : 712-715.

Génétique des populations de sous-espèces pullulantes et non-pullulantes du criquet migrateur Locusta migratoria. Chapuis Marie-Pierre, Loiseau Anne, Franc Alex, Michalakis Yannis, Lecoq Michel, Estoup Arnaud. 2005. In : Septième Conférence internationale sur les ravageurs en agriculture, Montpellier (France), 26 et 27 octobre 2005. AFPP. s.l. : s.n., Diaporama, (16 vues) Conférence Internationale sur les Ravageurs en Agriculture. 7, Montpellier, France, 26 Octobre 2005/27 Octobre 2005.

The genetic structure of australian populations of Mycosphaerella musicola suggests restricted gene flow at the continental scale. Hayden H.L., Carlier Jean, Aitken Elizabeth A. B.. 2005. Phytopathology, 95 (5) : 489-498.

A spatial statistical model for landscape genetics. Guillot Gilles, Estoup Arnaud, Mortier Frédéric, Cosson Jean François. 2005. Genetics, 170 (3) : 1261-1280.